Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0108
(421 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 23 1.2
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 23 1.6
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 22 2.1
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 22 2.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 3.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 3.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 3.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 3.7
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 21 3.7
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 21 6.4
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 21 6.4
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 20 8.5
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 20 8.5
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 23.0 bits (47), Expect = 1.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 175 GTRREEHHLLRNRP 134
G R+ HHL++N+P
Sbjct: 82 GVRKVLHHLIKNKP 95
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 22.6 bits (46), Expect = 1.6
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +2
Query: 245 EMRPEQKRY-PDPQIPHRTRNRH 310
E P ++ PD +P RT NRH
Sbjct: 100 EYYPNPDKFDPDNFLPERTANRH 122
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 22.2 bits (45), Expect = 2.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 175 GTRREEHHLLRNRP 134
G R+ HHL+ N+P
Sbjct: 82 GVRKVIHHLIENKP 95
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 22.2 bits (45), Expect = 2.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 175 GTRREEHHLLRNRP 134
G R+ HHL+ N+P
Sbjct: 82 GVRKVIHHLIENKP 95
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 3.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 341 MPNLLHVIPVSDDSVFD 291
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 3.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 341 MPNLLHVIPVSDDSVFD 291
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 3.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 341 MPNLLHVIPVSDDSVFD 291
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 3.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 341 MPNLLHVIPVSDDSVFD 291
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 21.4 bits (43), Expect = 3.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 303 IVTNWDDMEKIWHHTFYNELRVAPEEHPVL 392
+VT+W + E+I++ +L V PV+
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVI 187
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 20.6 bits (41), Expect = 6.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 177 LDRGKAPPSGRD 212
LDRGK P G++
Sbjct: 49 LDRGKCSPDGQE 60
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 20.6 bits (41), Expect = 6.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 177 LDRGKAPPSGRD 212
LDRGK P G++
Sbjct: 49 LDRGKCSPDGQE 60
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 20.2 bits (40), Expect = 8.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 66 KLVRCXCDKMKIKRPAVTANR 4
K R D+ ++ RPA ANR
Sbjct: 330 KRPRPNIDRHEVTRPAAPANR 350
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 20.2 bits (40), Expect = 8.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 273 GYLFCSGLISY 241
GYLFC+ L Y
Sbjct: 71 GYLFCASLSFY 81
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,478
Number of Sequences: 336
Number of extensions: 2402
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9279512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -