Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0105
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   9.5  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 647 WVCSLTEWNFFYQSSRSH 594
           WV  + EW+F   S R++
Sbjct: 139 WVTIMKEWSFMEMSMRNY 156


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 353 LDLSVAIFLPVSRSHNLQELSPPP 282
           LD  V+I +P+S  H   E  P P
Sbjct: 383 LDKGVSIMVPISGLHYDPEYYPDP 406


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 642 YPPKSPIMQLFSVDGT 689
           YP + PI+ +F V+ T
Sbjct: 43  YPREQPIVAMFEVNNT 58


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +3

Query: 306 VMGSGDRQEYCNTQIQLFCKNMQLQL*CISSCLY 407
           ++G G  +EY    +QL+ +       C+  C++
Sbjct: 136 ILGFGYFREYLAEAVQLYFQFYYTYFLCVIVCIF 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,368
Number of Sequences: 336
Number of extensions: 4161
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)