Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0103
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 149 4e-37
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 149 5e-37
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 149 5e-37
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 79 6e-16
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 78 1e-15
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 57 3e-09
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 35 0.013
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.017
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 34 0.022
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 31 0.16
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.21
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.28
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.48
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 29 0.64
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 1.5
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 1.5
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.4
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.5
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 25 7.8
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 25 7.8
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 25 7.8
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 25 7.8
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 149 bits (361), Expect = 4e-37
Identities = 95/208 (45%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISK 129
Query: 234 NGQTREHPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 413
+GQTREH K T + TS +
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKM-----DTTGWSQARFEEIVKETSNFIKKVGFNPK 184
Query: 414 SCPF--LDGTETTCWSLQP--KWPWFKGWQVERKEGKLTENASLKLSMAILPPARPHLNK 581
+ PF + G + ++P PW++GWQ E K G + L+ +I PPARP +K
Sbjct: 185 TVPFVPVSGFQGDN-MIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP-TDK 242
Query: 582 PLXSSPCKTYTKSVVLVPWPVGXVETWV 665
PL P + K + PVG VET V
Sbjct: 243 PL-RLPLQDVYKIGGIGTVPVGRVETGV 269
Score = 129 bits (311), Expect = 4e-31
Identities = 68/128 (53%), Positives = 83/128 (64%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+
Sbjct: 137 ALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVY 613
GDNM+EP+T M Q K L+EA+D P P PLQDVY
Sbjct: 195 QGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP--TDKPLRLPLQDVY 252
Query: 614 XIGGIGTV 637
IGGIGTV
Sbjct: 253 KIGGIGTV 260
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 GSXKYAWVLDKLKAERE 51
GS KYAWVLDKLKAERE
Sbjct: 52 GSFKYAWVLDKLKAERE 68
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 149 bits (360), Expect = 5e-37
Identities = 94/208 (45%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISK 129
Query: 234 NGQTREHPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 413
+GQTREH K T + TS +
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKM-----DTTGWSQARFEEIVKETSNFIKKVGFNPK 184
Query: 414 SCPF--LDGTETTCWSLQP--KWPWFKGWQVERKEGKLTENASLKLSMAILPPARPHLNK 581
+ PF + G + ++P PW++GWQ E K G + L+ +I PPARP +K
Sbjct: 185 TVPFVPVSGFQGDN-MIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP-TDK 242
Query: 582 PLXSSPCKTYTKSVVLVPWPVGXVETWV 665
PL P + K + PVG VET V
Sbjct: 243 PL-RLPLQDVYKIGGIGTVPVGRVETGV 269
Score = 129 bits (311), Expect = 4e-31
Identities = 68/128 (53%), Positives = 83/128 (64%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+
Sbjct: 137 ALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVY 613
GDNM+EP+T M Q K L+EA+D P P PLQDVY
Sbjct: 195 QGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP--TDKPLRLPLQDVY 252
Query: 614 XIGGIGTV 637
IGGIGTV
Sbjct: 253 KIGGIGTV 260
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 GSXKYAWVLDKLKAERE 51
GS KYAWVLDKLKAERE
Sbjct: 52 GSFKYAWVLDKLKAERE 68
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 149 bits (360), Expect = 5e-37
Identities = 94/208 (45%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISK 129
Query: 234 NGQTREHPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 413
+GQTREH K T + TS +
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKM-----DTTGWSQARFEEIVKETSNFIKKVGFNPK 184
Query: 414 SCPF--LDGTETTCWSLQP--KWPWFKGWQVERKEGKLTENASLKLSMAILPPARPHLNK 581
+ PF + G + ++P PW++GWQ E K G + L+ +I PPARP +K
Sbjct: 185 TVPFVPVSGFQGDN-MIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP-TDK 242
Query: 582 PLXSSPCKTYTKSVVLVPWPVGXVETWV 665
PL P + K + PVG VET V
Sbjct: 243 PL-RLPLQDVYKIGGIGTVPVGRVETGV 269
Score = 129 bits (311), Expect = 4e-31
Identities = 68/128 (53%), Positives = 83/128 (64%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+
Sbjct: 137 ALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVY 613
GDNM+EP+T M Q K L+EA+D P P PLQDVY
Sbjct: 195 QGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP--TDKPLRLPLQDVY 252
Query: 614 XIGGIGTV 637
IGGIGTV
Sbjct: 253 KIGGIGTV 260
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 GSXKYAWVLDKLKAERE 51
GS KYAWVLDKLKAERE
Sbjct: 52 GSFKYAWVLDKLKAERE 68
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 79.0 bits (186), Expect = 6e-16
Identities = 37/67 (55%), Positives = 44/67 (65%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
G+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +
Sbjct: 240 GVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLE 299
Query: 234 NGQTREH 254
NGQTREH
Sbjct: 300 NGQTREH 306
Score = 53.6 bits (123), Expect = 3e-08
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 272 LGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNM 448
LG+ +++V VNK+D +SE RF+EIK VS + IK +G+ + V FVPIS G N+
Sbjct: 313 LGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNL 370
Query: 449 LE 454
++
Sbjct: 371 IQ 372
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 78.2 bits (184), Expect = 1e-15
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG +
Sbjct: 301 GKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFER 360
Query: 234 NGQTREH 254
GQTREH
Sbjct: 361 GGQTREH 367
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 56.8 bits (131), Expect = 3e-09
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+
Sbjct: 101 GITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP----- 155
Query: 234 NGQTREH 254
QTREH
Sbjct: 156 --QTREH 160
Score = 39.1 bits (87), Expect = 6e-04
Identities = 38/127 (29%), Positives = 55/127 (43%)
Frame = +2
Query: 257 LLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 436
LLA +GVKQ++V +NK+D EP E E+++ +S Y G+
Sbjct: 162 LLARQVGVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY-----------------GFD 204
Query: 437 GDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVYX 616
GDN S AL L+EA+D + T P P + ++DV+
Sbjct: 205 GDNTPIVSGS-ALCALEGREPEIGLNSITKLMEAVDSY-ITLPERKTDVPFLMAIEDVFS 262
Query: 617 IGGIGTV 637
I G GTV
Sbjct: 263 ISGRGTV 269
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 34.7 bits (76), Expect = 0.013
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GITI+ A F + +ID PGH DF + + D AV I+ G
Sbjct: 78 GITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.017
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 84 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 254
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.9 bits (74), Expect = 0.022
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 54 GITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GIT I + F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 31.1 bits (67), Expect = 0.16
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 102 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 197
+V+ +D PGH + M+ G + D A+L++A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.21
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 75 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.28
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 99 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 111 IIDAPGHRDFIKNMITGTSQADCAVLIV 194
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 29.1 bits (62), Expect = 0.64
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = +3
Query: 357 RRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQ----PKWPWFKG----WQVERKEGK 512
R K+ + + +Q+LS +LD T W ++ PK+P + WQV++ +
Sbjct: 38 REKFGKDISQPSVSQILSSKYSYLDNTVEKPWDVKRNRPPKYPLLEAALFEWQVQQGDDA 97
Query: 513 LTENASLKLSMAIL 554
++K + AIL
Sbjct: 98 TLSGETIKRAAAIL 111
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 99 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 194
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 99 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 194
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 114 IDAPGHRDFIKNMITGTSQADCAVLIV 194
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 57 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 149
+ I+I + E +++ T+ID PG DFI N
Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 7.8
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 330 TVSPDLRKSRRKYPHTSRRLATTQLLSLSC 419
+ +PD+ ++PHT +R +T + L + C
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRC 174
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 533 EALDGHPATCPPPLEQAPXVFPL 601
E +DG+P PPP P PL
Sbjct: 796 EVIDGNPFKAPPPAPLPPPAPPL 818
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 556 GRMAIESFNEAFSVSFPSLRSTCHPLNQGHFG 461
GR+A + N S++STC + + H G
Sbjct: 317 GRVAADDLNRVVQAVGGSIQSTCSNIEEKHLG 348
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 525 HFPSAFLPYAPPAIP*TKAILVEGSN 448
H PS LP+ P +P TK L E ++
Sbjct: 258 HSPSPSLPFKTPLLPVTKTPLEEANS 283
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,087,317
Number of Sequences: 5004
Number of extensions: 66090
Number of successful extensions: 227
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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