BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0103
(695 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 26 1.3
AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding pr... 25 2.3
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 25 2.3
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 25 3.0
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 7.0
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 23 9.2
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 9.2
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 25.8 bits (54), Expect = 1.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 403 SWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 287
++V+AN L V FLL K L + W+ + S+DE
Sbjct: 927 AFVMANALFVLVIFLLQLKKQELHIEWWFNVKNKISFDE 965
>AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding
protein OBPjj5a protein.
Length = 272
Score = 25.0 bits (52), Expect = 2.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 92 SFELPESNIDCDTXSRSAFSLSNT 21
+F LP+SN +C T +R S NT
Sbjct: 142 NFHLPKSNRNCRTAARRNHSSRNT 165
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 502 RKES*RKMPH*SSRWPSCHLP 564
R+ R+ P RWPSC P
Sbjct: 254 RRNPRRRSPRSGGRWPSCRSP 274
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 24.6 bits (51), Expect = 3.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 349 GNQEGSILIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQN 468
G Q + I + WLQ + RA RR+H +F+ N
Sbjct: 982 GRQFSNEGISGQSWLQLQQQKLRARREQQRREHSNSFSYN 1021
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.4 bits (48), Expect = 7.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 323 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 415
PP+S +KK+ Y+++ N +A F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 23.0 bits (47), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 78 WKFETSKYYVTIIDAPG 128
W +E K+ T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.0 bits (47), Expect = 9.2
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 303 TKWIPLNHHTVSPDLRKSRRK----YPHTSRRLATTQLLSLS 416
T ++ L+HH + PD+ K+ + + T AT +L+++S
Sbjct: 822 TLFMALDHHDMDPDMEKALKSGNYFFTATFAIEATMKLIAMS 863
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,003
Number of Sequences: 2352
Number of extensions: 16956
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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