Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0103
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 165 3e-41
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 165 3e-41
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 141 4e-34
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 122 2e-28
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 94 7e-20
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 94 7e-20
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 85 5e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 60 2e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 60 2e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 60 2e-09
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 59 3e-09
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 59 3e-09
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.007
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 33 0.15
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 31 0.60
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 31 0.60
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.0
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.0
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.0
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 30 1.4
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.4
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.8
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.8
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 29 2.4
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 29 2.4
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 29 2.4
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.4
U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical p... 29 3.2
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 29 4.2
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 28 7.3
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical ... 27 9.7
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 165 bits (401), Expect = 3e-41
Identities = 93/204 (45%), Positives = 111/204 (54%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 234 NGQTREHPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 413
NGQTREH K + + +++
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVP 189
Query: 414 SCPFLDGTETTCWSLQPKWPWFKGWQVERKEGKLTENASLKLSMAILPPARPHLNKPLXS 593
P + PWFKGW VERKEG + L+ +I+PP RP ++PL
Sbjct: 190 FVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP-TDRPL-R 247
Query: 594 SPCKTYTKSVVLVPWPVGXVETWV 665
P + K + PVG VET +
Sbjct: 248 LPLQDVYKIGGIGTVPVGRVETGI 271
Score = 138 bits (334), Expect = 3e-33
Identities = 77/130 (59%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 137 ALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPP--PLEQAPXVFPLQD 607
+GDNMLE S+ M + K L+EALD + PP P ++ P PLQD
Sbjct: 197 NGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALD---SIIPPQRPTDR-PLRLPLQD 252
Query: 608 VYXIGGIGTV 637
VY IGGIGTV
Sbjct: 253 VYKIGGIGTV 262
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 GSXKYAWVLDKLKAERE 51
GS KYAWVLDKLKAERE
Sbjct: 52 GSFKYAWVLDKLKAERE 68
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 165 bits (401), Expect = 3e-41
Identities = 93/204 (45%), Positives = 111/204 (54%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 234 NGQTREHPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 413
NGQTREH K + + +++
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVP 189
Query: 414 SCPFLDGTETTCWSLQPKWPWFKGWQVERKEGKLTENASLKLSMAILPPARPHLNKPLXS 593
P + PWFKGW VERKEG + L+ +I+PP RP ++PL
Sbjct: 190 FVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP-TDRPL-R 247
Query: 594 SPCKTYTKSVVLVPWPVGXVETWV 665
P + K + PVG VET +
Sbjct: 248 LPLQDVYKIGGIGTVPVGRVETGI 271
Score = 138 bits (334), Expect = 3e-33
Identities = 77/130 (59%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 137 ALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPP--PLEQAPXVFPLQD 607
+GDNMLE S+ M + K L+EALD + PP P ++ P PLQD
Sbjct: 197 NGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALD---SIIPPQRPTDR-PLRLPLQD 252
Query: 608 VYXIGGIGTV 637
VY IGGIGTV
Sbjct: 253 VYKIGGIGTV 262
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 GSXKYAWVLDKLKAERE 51
GS KYAWVLDKLKAERE
Sbjct: 52 GSFKYAWVLDKLKAERE 68
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 141 bits (342), Expect = 4e-34
Identities = 80/132 (60%), Positives = 86/132 (65%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 234 NGQTREHPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 413
NGQTREH + + L T SPD +SRR T Q L
Sbjct: 130 NGQTREHALLAQTLGV-------KQLVSLRSPTRSPD----------SSRRSDTIQRLFH 172
Query: 414 SCPFLDGTETTC 449
D TETTC
Sbjct: 173 LSQSPDSTETTC 184
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 GSXKYAWVLDKLKAERE 51
GS KYAWVLDKLKAERE
Sbjct: 52 GSFKYAWVLDKLKAERE 68
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 122 bits (294), Expect = 2e-28
Identities = 67/119 (56%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Frame = +2
Query: 287 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 466
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 467 MALVQXXXXXXXXXXXXXKCLIEALDGHPATCPP--PLEQAPXVFPLQDVYXIGGIGTV 637
M + K L+EALD + PP P ++ P PLQDVY IGGIGTV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALD---SIIPPQRPTDR-PLRLPLQDVYKIGGIGTV 228
Score = 102 bits (244), Expect = 3e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 197
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 GSXKYAWVLDKLKAERE 51
GS KYAWVLDKLKAERE
Sbjct: 52 GSFKYAWVLDKLKAERE 68
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 94.3 bits (224), Expect = 7e-20
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 292
Query: 234 NGQTREH 254
GQT+EH
Sbjct: 293 GGQTKEH 299
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISG 430
+LL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG
Sbjct: 300 ALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSG 355
Query: 431 WHGDNMLE 454
+ G+N+++
Sbjct: 356 FTGENLIK 363
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 94.3 bits (224), Expect = 7e-20
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 310
Query: 234 NGQTREH 254
GQT+EH
Sbjct: 311 GGQTKEH 317
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISG 430
+LL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG
Sbjct: 318 ALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSG 373
Query: 431 WHGDNMLE 454
+ G+N+++
Sbjct: 374 FTGENLIK 381
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 85.0 bits (201), Expect = 5e-17
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G +
Sbjct: 172 GKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDR 231
Query: 234 NGQTREH 254
GQTREH
Sbjct: 232 GGQTREH 238
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISG 430
S+L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG
Sbjct: 239 SMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSG 298
Query: 431 WHG 439
G
Sbjct: 299 LTG 301
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 151
Query: 234 NGQTREH 254
QTREH
Sbjct: 152 --QTREH 156
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 152
Query: 234 NGQTREH 254
QTREH
Sbjct: 153 --QTREH 157
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 152
Query: 234 NGQTREH 254
QTREH
Sbjct: 153 --QTREH 157
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/67 (49%), Positives = 41/67 (61%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 234 NGQTREH 254
QT+EH
Sbjct: 148 --QTKEH 152
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/67 (49%), Positives = 41/67 (61%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 234 NGQTREH 254
QT+EH
Sbjct: 148 --QTKEH 152
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 54 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GIT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 87 GITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 544 IESFNEAFSVSFPS-LRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 395
+ES +S PS + P+ Q HF R QHV S PSR+ D + V
Sbjct: 25 LESLTTGNGMSSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 75
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 544 IESFNEAFSVSFPS-LRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 395
+ES +S PS + P+ Q HF R QHV S PSR+ D + V
Sbjct: 25 LESLTTGNGMSSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 75
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 63 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 63 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 102 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 197
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation
factor protein 4, isoformb protein.
Length = 77
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 1 GSXKYAWVLDKLKAER 48
GS KYAWVLDKLK +
Sbjct: 52 GSFKYAWVLDKLKVTK 67
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 60 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 97 GITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 60 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 111 IIDAPGHRDFIKNMITGTSQADCAVLIV 194
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 672 SNTPKFQLXRRATVPIPPIXYTSC-KGKTXGACSSGGGQVAGWPSRASMRHFPSAF 508
S+TP F + R +P P+ Y + +G + A GGG G+ + + P F
Sbjct: 588 SSTPSFPVSRATPLPFHPLLYNNGERGGSGHAAGGGGGGHNGYSTMNNRSASPRLF 643
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 672 SNTPKFQLXRRATVPIPPIXYTSC-KGKTXGACSSGGGQVAGWPSRASMRHFPSAF 508
S+TP F + R +P P+ Y + +G + A GGG G+ + + P F
Sbjct: 588 SSTPSFPVSRATPLPFHPLLYNNGERGGSGHAAGGGGGGHNGYSTMNNRSASPRLF 643
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 672 SNTPKFQLXRRATVPIPPIXYTSC-KGKTXGACSSGGGQVAGWPSRASMRHFPSAF 508
S+TP F + R +P P+ Y + +G + A GGG G+ + + P F
Sbjct: 588 SSTPSFPVSRATPLPFHPLLYNNGERGGSGHAAGGGGGGHNGYSTMNNRSASPRLF 643
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 369 PHTSRRLATTQLLSLSCPFLD 431
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 369 PHTSRRLATTQLLSLSCPFLD 431
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 369 PHTSRRLATTQLLSLSCPFLD 431
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 369 PHTSRRLATTQLLSLSCPFLD 431
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical
protein C37H5.13c protein.
Length = 99
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 505 SLRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 395
S + P+ Q HF R QHV S PSR+ D + V
Sbjct: 6 STHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 42
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -1
Query: 539 ELQ*GIFRQL--SFLTLHLPSLEPRPFWLKAPTCCLRAIQKWAR 414
EL G +R+ S+ +H+P+L+PRPF + + KWA+
Sbjct: 423 ELPDGSYRRQKKSYEEIHVPALKPRPFAEGEKLVSVSELPKWAQ 466
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 105 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 254
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEH 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 105 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 200
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 509 SFLTLHLPSLEPRPFWLKAPTCCLRAIQKWAR 414
S+ H+P+L+PRPF + + KWA+
Sbjct: 237 SYEEFHVPALQPRPFAGGEKITSVSELPKWAK 268
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 105 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 194
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 105 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 194
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical
protein K02D7.5 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 585 LXSSPCKTYTKSVVLVPWPVGXVETWVCLK 674
+ S P KT+T ++LV +G + W+ LK
Sbjct: 87 IYSLPKKTFTCQLILVTSTIGGMVLWIALK 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,268,056
Number of Sequences: 27780
Number of extensions: 378370
Number of successful extensions: 1227
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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