Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0103
(695 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 128 3e-30
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 128 3e-30
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 128 3e-30
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 128 3e-30
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 80 1e-15
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 80 2e-15
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 58 7e-09
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 56 3e-08
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 36 0.034
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 36 0.034
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.059
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.059
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.18
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.18
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.24
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.32
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.32
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.42
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.42
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.73
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 0.96
At2g38070.1 68415.m04673 expressed protein and genscan 31 0.96
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.7
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.2
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 29 2.9
At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR ... 29 3.9
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.1
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 5.1
At1g16410.2 68414.m01962 cytochrome P450, putative similar to gb... 28 5.1
At1g16410.1 68414.m01963 cytochrome P450, putative similar to gb... 28 5.1
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 6.8
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 6.8
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 9.0
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 9.0
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 27 9.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 128 bits (310), Expect = 3e-30
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 234 NGQTREH 254
+GQTREH
Sbjct: 130 DGQTREH 136
Score = 118 bits (285), Expect = 3e-27
Identities = 67/128 (52%), Positives = 80/128 (62%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVY 613
GDNM+E ST + L+EALD P P PLQDVY
Sbjct: 197 EGDNMIERSTNL------------DWYKGPTLLEALD--QINEPKRPSDKPLRLPLQDVY 242
Query: 614 XIGGIGTV 637
IGGIGTV
Sbjct: 243 KIGGIGTV 250
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 4 SXKYAWVLDKLKAERE 51
S KYAWVLDKLKAERE
Sbjct: 53 SFKYAWVLDKLKAERE 68
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 128 bits (310), Expect = 3e-30
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 234 NGQTREH 254
+GQTREH
Sbjct: 130 DGQTREH 136
Score = 118 bits (285), Expect = 3e-27
Identities = 67/128 (52%), Positives = 80/128 (62%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVY 613
GDNM+E ST + L+EALD P P PLQDVY
Sbjct: 197 EGDNMIERSTNL------------DWYKGPTLLEALD--QINEPKRPSDKPLRLPLQDVY 242
Query: 614 XIGGIGTV 637
IGGIGTV
Sbjct: 243 KIGGIGTV 250
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 4 SXKYAWVLDKLKAERE 51
S KYAWVLDKLKAERE
Sbjct: 53 SFKYAWVLDKLKAERE 68
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 128 bits (310), Expect = 3e-30
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 234 NGQTREH 254
+GQTREH
Sbjct: 130 DGQTREH 136
Score = 118 bits (285), Expect = 3e-27
Identities = 67/128 (52%), Positives = 80/128 (62%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVY 613
GDNM+E ST + L+EALD P P PLQDVY
Sbjct: 197 EGDNMIERSTNL------------DWYKGPTLLEALD--QINEPKRPSDKPLRLPLQDVY 242
Query: 614 XIGGIGTV 637
IGGIGTV
Sbjct: 243 KIGGIGTV 250
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 4 SXKYAWVLDKLKAERE 51
S KYAWVLDKLKAERE
Sbjct: 53 SFKYAWVLDKLKAERE 68
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 128 bits (310), Expect = 3e-30
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 234 NGQTREH 254
+GQTREH
Sbjct: 130 DGQTREH 136
Score = 118 bits (285), Expect = 3e-27
Identities = 67/128 (52%), Positives = 80/128 (62%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 434 HGDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVY 613
GDNM+E ST + L+EALD P P PLQDVY
Sbjct: 197 EGDNMIERSTNL------------DWYKGPTLLEALD--QINEPKRPSDKPLRLPLQDVY 242
Query: 614 XIGGIGTV 637
IGGIGTV
Sbjct: 243 KIGGIGTV 250
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 4 SXKYAWVLDKLKAERE 51
S KYAWVLDKLKAERE
Sbjct: 53 SFKYAWVLDKLKAERE 68
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G +
Sbjct: 164 GKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 223
Query: 234 NGQTREH 254
GQTREH
Sbjct: 224 GGQTREH 230
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 260 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWH 436
LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GYN V F+PISG
Sbjct: 233 LAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLM 292
Query: 437 GDNM 448
G NM
Sbjct: 293 GKNM 296
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 302 GITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDN 361
Query: 234 -NGQTREH 254
GQTREH
Sbjct: 362 LKGQTREH 369
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +2
Query: 275 GVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 451
GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S N++
Sbjct: 377 GVEQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLV 433
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 57.6 bits (133), Expect = 7e-09
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 178
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDG 166
Score = 30.3 bits (65), Expect = 1.3
Identities = 33/128 (25%), Positives = 58/128 (45%)
Frame = +2
Query: 257 LLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 436
LLA +GV L+ +NK+D + P E +E+ S+ K G + + +S
Sbjct: 176 LLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQ 235
Query: 437 GDNMLEPSTKMALVQXXXXXXXXXXXXXKCLIEALDGHPATCPPPLEQAPXVFPLQDVYX 616
G N + + A+++ L++A+D + P + P + P++DV+
Sbjct: 236 GTN--DEIGRQAILK---------------LMDAVDEYIPD-PVRVLDKPFLMPIEDVFS 277
Query: 617 IGGIGTVA 640
I G GTVA
Sbjct: 278 IQGRGTVA 285
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 35.5 bits (78), Expect = 0.034
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 234 NGQTREH 254
+ Q R +
Sbjct: 178 DRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 35.5 bits (78), Expect = 0.034
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 233
GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 234 NGQTREH 254
+ Q R +
Sbjct: 178 DRQMRRY 184
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 57 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 57 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 87 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 57 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 105 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 90 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 200
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 90 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 200
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 102 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 200
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +3
Query: 84 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 200
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +3
Query: 54 GITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 133 GITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 269 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 430
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At2g38070.1 68415.m04673 expressed protein and genscan
Length = 619
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 352 NQEGSILIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNGLGSRDGRWS 498
++E L+ + L+ CC ++ M R++VG N ++ RWS
Sbjct: 445 DREAKDLVSHSNSLRDDCCSVENNYEMGVRENVGTIECNKKRTKKSRWS 493
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 111 IIDAPGHRDFIKNMITGTSQADCAVLIV 194
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 111 IIDAPGHRDFIKNMITGTSQADCAVLIV 194
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 111 IIDAPGHRDFIKNMITGTSQADCAVLIV 194
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 93 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 194
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 105 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 194
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 54 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 146 GITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 521 FRQLSFLTLH-LPSLEPRPFWLKAPTCCLRAI 429
F +L+FLTLH LP L+ + +W P CL I
Sbjct: 795 FPELNFLTLHDLPKLK-KIYWRPLPFLCLEEI 825
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 332 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 421
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 197 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSN 24
++D+HS +L+ D + D + ++ N+VL F P+ D T +R A L N
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108
>At1g16410.2 68414.m01962 cytochrome P450, putative similar to
gb|AF069494 cytochrome P450 from Sinapis alba and is a
member of the PF|00067 Cytochrome P450 family
Length = 423
Score = 28.3 bits (60), Expect = 5.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 474 WFKGWQVERKEGKLTENASL 533
W +GW V+ +E ++TEN ++
Sbjct: 251 WLRGWNVDGQEKRVTENCNI 270
>At1g16410.1 68414.m01963 cytochrome P450, putative similar to
gb|AF069494 cytochrome P450 from Sinapis alba and is a
member of the PF|00067 Cytochrome P450 family
Length = 538
Score = 28.3 bits (60), Expect = 5.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 474 WFKGWQVERKEGKLTENASL 533
W +GW V+ +E ++TEN ++
Sbjct: 251 WLRGWNVDGQEKRVTENCNI 270
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 338 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 448
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 114 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 314 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 427
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 314 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 427
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 257 RMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 93
+++ + + D F+G + +I LRG+ HVLDE RS++D VL+
Sbjct: 342 KLIEEIMIGEDKLIHFSGC-EMGQACSIVLRGASHHVLDE--AERSLHDALCVLS 393
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,617,910
Number of Sequences: 28952
Number of extensions: 365191
Number of successful extensions: 1161
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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