Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0102
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41) 225 3e-59
SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25) 116 1e-26
SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 4e-18
SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 7e-18
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07) 88 7e-18
SB_49265| Best HMM Match : efhand (HMM E-Value=0.68) 58 5e-09
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15) 49 4e-06
SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16) 40 0.002
SB_54281| Best HMM Match : KAP_NTPase (HMM E-Value=0.46) 29 2.7
SB_30320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4) 28 8.2
SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57) 28 8.2
>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
Length = 293
Score = 225 bits (549), Expect = 3e-59
Identities = 106/128 (82%), Positives = 112/128 (87%)
Frame = +1
Query: 253 LKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ 432
LKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ
Sbjct: 40 LKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ 99
Query: 433 SLETICLLLAYKIKYPENFFLLRGNPSVPAFNRIYGFYDECKREV*H*TMGRRSQTXFNC 612
SLETICLLLAYKIKYPENFFLLRGN + NRIYGFYDECKR + + + FNC
Sbjct: 100 SLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNC 158
Query: 613 LPVAAIVE 636
LPVAAI++
Sbjct: 159 LPVAAILD 166
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +2
Query: 143 DTDELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLC 253
+ ++LN+D++I +LL+VRG +PG NVQLTE EI+GLC
Sbjct: 3 EPEKLNVDSIISRLLEVRGSRPGKNVQLTEAEIRGLC 39
>SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)
Length = 173
Score = 116 bits (280), Expect = 1e-26
Identities = 60/138 (43%), Positives = 84/138 (60%)
Frame = +1
Query: 265 EIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLET 444
E+ L + + + +P+ +CGDIHGQ+YDL LF GG P ++Y+F+GD+VDRG SLET
Sbjct: 31 ELLLEESNVQPVSSPVTVCGDIHGQFYDLEELFRTGGQVPNTSYVFMGDFVDRGYYSLET 90
Query: 445 ICLLLAYKIKYPENFFLLRGNPSVPAFNRIYGFYDECKREV*H*TMGRRSQTXFNCLPVA 624
LL K K+P+ LLRGN ++YGFYDEC+ + + R F+ L VA
Sbjct: 91 FTRLLTLKAKWPDRITLLRGNHESRQITQVYGFYDECQSKYGNANAWRYCCKVFDLLTVA 150
Query: 625 AIVERGKSSGWSTGGLSP 678
AI++ G+ GGLSP
Sbjct: 151 AIID-GQVL-CVHGGLSP 166
>SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 88.6 bits (210), Expect = 4e-18
Identities = 45/95 (47%), Positives = 57/95 (60%)
Frame = +1
Query: 268 IFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 447
I + +LE++AP+ +CGDIHGQ+YDL++LFE GG P + YLFLGDYVDRG S+E
Sbjct: 69 ILRKEKTMLEVDAPITVCGDIHGQFYDLVKLFEVGGSPATTRYLFLGDYVDRGYFSIE-- 126
Query: 448 CLLLAYKIKYPENFFLLRGNPSVPAFNRIYGFYDE 552
CL Y FLLRGN + F E
Sbjct: 127 CL-------YTNTLFLLRGNHECRHLTEYFTFKTE 154
>SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 87.8 bits (208), Expect = 7e-18
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = +1
Query: 259 SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ 432
SREIFL QP+LLE+ AP+ I GDIHGQY DLLR F+ G+PP +Y+FLGDYVDR K+
Sbjct: 44 SREIFLQQPMLLEIGAPINIFGDIHGQYEDLLRHFDKLGYPPNESYIFLGDYVDRPKR 101
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 155 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLC 253
L++DNVI++LL + + PG VQL E +I+ +C
Sbjct: 10 LDVDNVIEQLLSYK-KNPGKQVQLPEAQIRQIC 41
>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
Length = 199
Score = 87.8 bits (208), Expect = 7e-18
Identities = 35/71 (49%), Positives = 53/71 (74%)
Frame = +1
Query: 256 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 435
K++EI + + E++ P+ +CGD+HGQ++DL+ LF GG P++NYLF+GDYVDRG S
Sbjct: 35 KAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYS 94
Query: 436 LETICLLLAYK 468
+ET+ LL+ K
Sbjct: 95 VETVTLLVTLK 105
>SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)
Length = 720
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = +1
Query: 262 REIFLSQPILLELEAPLKICGDIHGQYYDLL----RLFEYGGFPPESNYLFLGDYVDRGK 429
RE+ + +P +L +++P+ + GD+HG + DL+ L+ G SN+LFLGDYVDRG+
Sbjct: 657 REVVMEEPRMLRVQSPVYVLGDLHGNFRDLVCFEKLLWRMGPVLTPSNFLFLGDYVDRGE 716
Query: 430 QSLE 441
+E
Sbjct: 717 NGVE 720
>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
Length = 417
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 373 GFP-PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 507
G P PE+ Y+F GD VDRG +S+E +L A+ I YP ++ RGN
Sbjct: 2 GLPSPENPYIFNGDLVDRGPRSIEICIILFAFTILYPNGVYINRGN 47
>SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)
Length = 250
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = +1
Query: 316 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 495
+ GDIHG L +LFE +FLGDYVD +S TI L+ +I +
Sbjct: 7 VFGDIHGGLRALQQLFERAEITINDKLIFLGDYVDGWSESAATIQFLI--EIAEKHDCIF 64
Query: 496 LRGN 507
++GN
Sbjct: 65 IKGN 68
>SB_54281| Best HMM Match : KAP_NTPase (HMM E-Value=0.46)
Length = 911
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 415 VDRGKQSLETICLLLAYKIKYPENFFLLRGNPSVPAFNRIYG 540
+ RGKQ ++ I LL+Y +K N L NPS+ A N + G
Sbjct: 53 LSRGKQLVQVILKLLSYCVKLKVNLKYL-CNPSLNALNVLLG 93
>SB_30320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -3
Query: 332 CMSPQIFKGASSSSSIGCDKNISLDFNIAL*FLFPSTEHSYQASHLVLLVIFLLRYRC 159
C S + G S S C+ ++ +N FL S+ H Y S L + LLR C
Sbjct: 20 CFSVNVASGKDSESKFWCELLVTDKYNAPDKFLPNSSSHHYSIS---LKALMLLRELC 74
>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
Length = 242
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 439 PTTACHGPHSLRGRDSWTPEGSHHTQTTLRGH 344
PT HGPH+ +WTP G HT T H
Sbjct: 202 PTRTPHGPHT---DPTWTPHGP-HTDPTRNPH 229
>SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57)
Length = 818
Score = 27.9 bits (59), Expect = 8.2
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Frame = +2
Query: 317 FAVTYMDNTMTS*GCLSMVASLRSPTIS----SSETMWTVASSRWKQYACSSPTRLNIPR 484
F +T M N G LS+V +S T + S + SS Q C+S T P
Sbjct: 90 FKITDMPNEQCD-GSLSIVMENKSKTTNVTNDSQNRKPAIPSSDLSQRTCASTTTTQRPT 148
Query: 485 ----ISFFYAETR-VCQHSIGFMGFTMSAKGRYNIKLWEDVHRLAS 607
I E R + QH + + T +A + +K E RLAS
Sbjct: 149 GACDIESENEENRRITQHPVATLDTTKTAISKRTLKSIEQQSRLAS 194
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,059,613
Number of Sequences: 59808
Number of extensions: 480426
Number of successful extensions: 1307
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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