Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0101
         (685 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900...    28   6.0  
06_03_0547 + 22001831-22002304                                         28   7.9  

>01_04_0143 +
           16689471-16689498,16689687-16689818,16689974-16690013,
           16690214-16690280,16690349-16690431,16690755-16690821,
           16692741-16692821,16693696-16693791,16694172-16694198
          Length = 206

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 148 CYFFENSPLNKSHQI*RCMLS-SLPVWLWVC 237
           CY  E + L++ HQI  C ++ S  V +W C
Sbjct: 71  CYHLEEADLHQCHQILTCTINGSSLVMIWCC 101


>06_03_0547 + 22001831-22002304
          Length = 157

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 433 DEQGRIREVFRKLSDDSWEKTIGLISTSLRGVGRWTSRVTPH*KG 567
           D +G I    R L D++ ++  GL +     VGRW SR +P  +G
Sbjct: 87  DGEGWIPTCLRSLDDEA-DRVGGLAAGDDPPVGRWKSRRSPRRRG 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,600,295
Number of Sequences: 37544
Number of extensions: 361265
Number of successful extensions: 916
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)