Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0101
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical p...    31   1.0  
AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical ...    31   1.0  
AC024859-9|ABQ13045.1|  296|Caenorhabditis elegans Hypothetical ...    28   7.1  
AC024859-8|ABQ13046.1|  337|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z80214-1|CAB02262.1|  500|Caenorhabditis elegans Hypothetical pr...    27   9.4  
L23651-12|AAA27958.1|  305|Caenorhabditis elegans Collagen prote...    27   9.4  
AC006693-2|AAF60378.2|  334|Caenorhabditis elegans Serpentine re...    27   9.4  

>Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 185 IKYEGVCSHRCLSGSGCAGRGRLSYQNVDQGCRRTLSLPHCSAYYGQ 325
           +K+ G   H C+ GSG     R   +  DQ   RT+S+  CS  +G+
Sbjct: 182 LKHSGRLGHSCVYGSGTWSERRQYEEPFDQVSERTISI--CSTGHGE 226


>AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 185 IKYEGVCSHRCLSGSGCAGRGRLSYQNVDQGCRRTLSLPHCSAYYGQ 325
           +K+ G   H C+ GSG     R   +  DQ   RT+S+  CS  +G+
Sbjct: 182 LKHSGRLGHSCVYGSGTWSERRQYEEPFDQVSERTISI--CSTGHGE 226


>AC024859-9|ABQ13045.1|  296|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.14a protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 377 YLKRSYHYLLSASYFNNYQTNREGFAKSSGNYRTI 481
           +L    H+  S  YF   Q    G+ K SGNY ++
Sbjct: 78  FLHLDSHFYQSWKYFAGMQRELIGYVKKSGNYSSL 112


>AC024859-8|ABQ13046.1|  337|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.14b protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 377 YLKRSYHYLLSASYFNNYQTNREGFAKSSGNYRTI 481
           +L    H+  S  YF   Q    G+ K SGNY ++
Sbjct: 119 FLHLDSHFYQSWKYFAGMQRELIGYVKKSGNYSSL 153


>Z80214-1|CAB02262.1|  500|Caenorhabditis elegans Hypothetical
           protein C27D8.2 protein.
          Length = 500

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -1

Query: 532 FPPLLVTCL*DQWFSPTNRPIIS*RLRE-SFPVRLV 428
           F P L++C+  ++ SP +R II  R+ + + P +LV
Sbjct: 226 FAPSLLSCIRTKFLSPVDRTIIIERMNQLNMPTKLV 261


>L23651-12|AAA27958.1|  305|Caenorhabditis elegans Collagen protein
           90 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +1

Query: 370 LTVFETFLPLSPVGLLLQQLPDE-QGRIREVFRKLSDDSWEKTIGLIS 510
           L V  +   +S +   +  L DE +GR+ E F+ L+DD+W++ + L S
Sbjct: 14  LGVLSSLFSISHIVRDINSLRDEVEGRVDE-FKVLADDTWQRLLVLQS 60


>AC006693-2|AAF60378.2|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein271 protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 608 ISWPTSTV*LLP-LSPFQCGVTREVHLPTP 522
           IS  TS   L P L+ F CGV +E  +PTP
Sbjct: 63  ISLMTSPFALFPVLAGFPCGVLKEFGIPTP 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,747,311
Number of Sequences: 27780
Number of extensions: 298823
Number of successful extensions: 689
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)