Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0100
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    25   0.62 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    25   0.62 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   1.4  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.7  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
 Frame = +1

Query: 262 NVDQGCRRTL----SLPHCSAYYGQFKD 333
           NVD G R  L    S PHC   YG F D
Sbjct: 77  NVDCGDRTQLEPPISSPHCERLYGIFAD 104


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
 Frame = +1

Query: 262 NVDQGCRRTL----SLPHCSAYYGQFKD 333
           NVD G R  L    S PHC   YG F D
Sbjct: 77  NVDCGDRTQLEPPISSPHCERLYGIFAD 104


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 137 DVCRKYCLYTHWRRRRLPTMTRLDENVR 54
           ++CRK C  T + +  + T+ R DE  +
Sbjct: 83  NLCRKNCFTTDYFKGCIDTLQRSDEEAQ 110


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 137 DVCRKYCLYTHWRRRRLPTMTRLDENVR 54
           ++CRK C  T + +  + T+ R DE  +
Sbjct: 83  NLCRKNCFTTDYFKGCIDTLQRSDEEAQ 110


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 377 YLKRSYHYLLSASYFNNYQTXQGRIRELF 463
           YL   Y  +L    FNNYQ+    +R  F
Sbjct: 502 YLMFDYCTVLRVQRFNNYQSLAHYLRVFF 530


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 158 EKITSAFDVCRKYCLYTH 105
           + I    DVC+KY L+ H
Sbjct: 301 DPIEKIADVCQKYKLWLH 318


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
 Frame = +1

Query: 130 HTSNALVIFSRIRH*INRIKYEGVCSHRCLSGSGCAGRGRLIYQNVDQGC--RRTL-SLP 300
           H SN  V F R  +  N    +G     CL     A   RL + N+D+     RT+    
Sbjct: 287 HISNQFVAFRRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLYFSNLDKDAFIHRTVDDYF 346

Query: 301 HCSAYYGQFKDNHVVANELKVISLTVFETFLP 396
            CS +  +  D  ++   +  ++ T   T LP
Sbjct: 347 FCSPHPHKVYDFELLIKGVYQVNPTKTRTNLP 378


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 83  LEVAFCASVCKGSTFDIRQTHLLFFREFATK 175
           LE+    +VC+ +  + ++T  L +R   TK
Sbjct: 291 LEILITVTVCELTILEYKRTKKLLYRIPVTK 321


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 83  LEVAFCASVCKGSTFDIRQTHLLFFREFATK 175
           LE+    +VC+ +  + ++T  L +R   TK
Sbjct: 116 LEILITVTVCELTILEYKRTKKLLYRIPVTK 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,331
Number of Sequences: 336
Number of extensions: 2642
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)