BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0100 (586 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_43795| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6 SB_16703| Best HMM Match : RVT_1 (HMM E-Value=0.41) 29 2.1 SB_9593| Best HMM Match : RVT_1 (HMM E-Value=0.017) 29 2.1 SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) 28 4.9 SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096) 28 4.9 SB_42200| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4 SB_42880| Best HMM Match : Laminin_II (HMM E-Value=2.1) 28 6.4 SB_11570| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4 SB_33499| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5 SB_23592| Best HMM Match : Papilloma_E5 (HMM E-Value=2.7) 27 8.5 SB_51094| Best HMM Match : VWA (HMM E-Value=0) 27 8.5 SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1) 27 8.5 >SB_43795| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 253 Score = 29.9 bits (64), Expect = 1.6 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151 LVDV ID+ A+ P Q ++FD + L A++ K+ Sbjct: 81 LVDVYIDDFYGAAMPDVSQDEFNRMNYVFDELGLAASAAKD 121 >SB_16703| Best HMM Match : RVT_1 (HMM E-Value=0.41) Length = 523 Score = 29.5 bits (63), Expect = 2.1 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -2 Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151 LVDV ID+ A+ P Q +FD + LVA++ K+ Sbjct: 332 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLVASAAKD 372 >SB_9593| Best HMM Match : RVT_1 (HMM E-Value=0.017) Length = 574 Score = 29.5 bits (63), Expect = 2.1 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -2 Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151 LVDV ID+ A+ P Q +FD + LVA++ K+ Sbjct: 383 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLVASAAKD 423 >SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) Length = 269 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Frame = +1 Query: 193 EGVCSHRCLSGSGCAGRGRLIYQNVDQG---CRRT 288 + C HRC+ G C GR + + +G C RT Sbjct: 174 QSCCGHRCVFGKSCYGRSCDLTSDCSEGESCCHRT 208 >SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096) Length = 191 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Frame = +1 Query: 193 EGVCSHRCLSGSGCAGRGRLIYQNVDQG---CRRT 288 + C HRC+ G C GR + + +G C RT Sbjct: 96 QSCCGHRCVFGKSCYGRSCDLTSDCSEGESCCHRT 130 >SB_42200| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 450 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -2 Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151 LVDV ID+ A+ P Q +FD + L A++ K+ Sbjct: 4 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLAASAAKD 44 >SB_42880| Best HMM Match : Laminin_II (HMM E-Value=2.1) Length = 647 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -2 Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151 LVDV ID+ A+ P Q +FD + L A++ K+ Sbjct: 325 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLAASAAKD 365 >SB_11570| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 457 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -2 Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151 LVDV ID+ A+ P Q +FD + L A++ K+ Sbjct: 390 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLAASAAKD 430 >SB_33499| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 486 Score = 27.5 bits (58), Expect = 8.5 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = +1 Query: 115 RQYFRHTSNALVIFSRIRH*INRIKYEGVCSHRCLS 222 R + RH ++ +F R+ H NR++Y+G ++ C++ Sbjct: 367 RSHVRHEAS---LFGRMNHYENRVEYKGFTANICIA 399 >SB_23592| Best HMM Match : Papilloma_E5 (HMM E-Value=2.7) Length = 165 Score = 27.5 bits (58), Expect = 8.5 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -2 Query: 312 RAAVRQT*SPSASLVDVLIDESSSASTPRARQATMRAYTF 193 R ++R T SPS+SL S + PR RQ ++AY F Sbjct: 16 RTSMRSTLSPSSSLKG-----KSPSRLPRVRQGELKAYRF 50 >SB_51094| Best HMM Match : VWA (HMM E-Value=0) Length = 3544 Score = 27.5 bits (58), Expect = 8.5 Identities = 12/44 (27%), Positives = 25/44 (56%) Frame = -2 Query: 315 IRAAVRQT*SPSASLVDVLIDESSSASTPRARQATMRAYTFIFD 184 + A+RQ+ S +++L + L + +TP R+++ +A I D Sbjct: 2319 VNKAIRQSLSGNSNLEEALTNAKKILNTPNTRKSSRKAVVIITD 2362 >SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1) Length = 245 Score = 27.5 bits (58), Expect = 8.5 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -3 Query: 167 RILEKITSAFDVCRKYCLYTHWRRRRLPTMTRLDENVRTKTTDCN 33 R L+ + SA VC +YCLY W R R ++ + + T TD N Sbjct: 100 RQLQALDSA--VCGQYCLYFLWHRARNKSLQDI-TTMFTPHTDWN 141 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,145,543 Number of Sequences: 59808 Number of extensions: 338596 Number of successful extensions: 765 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 765 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1410146228 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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