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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0100
         (586 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43795| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_16703| Best HMM Match : RVT_1 (HMM E-Value=0.41)                    29   2.1  
SB_9593| Best HMM Match : RVT_1 (HMM E-Value=0.017)                    29   2.1  
SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1)                 28   4.9  
SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096)               28   4.9  
SB_42200| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_42880| Best HMM Match : Laminin_II (HMM E-Value=2.1)                28   6.4  
SB_11570| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_33499| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  
SB_23592| Best HMM Match : Papilloma_E5 (HMM E-Value=2.7)              27   8.5  
SB_51094| Best HMM Match : VWA (HMM E-Value=0)                         27   8.5  
SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)              27   8.5  

>SB_43795| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 253

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151
           LVDV ID+   A+ P   Q       ++FD + L A++ K+
Sbjct: 81  LVDVYIDDFYGAAMPDVSQDEFNRMNYVFDELGLAASAAKD 121


>SB_16703| Best HMM Match : RVT_1 (HMM E-Value=0.41)
          Length = 523

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151
           LVDV ID+   A+ P   Q        +FD + LVA++ K+
Sbjct: 332 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLVASAAKD 372


>SB_9593| Best HMM Match : RVT_1 (HMM E-Value=0.017)
          Length = 574

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151
           LVDV ID+   A+ P   Q        +FD + LVA++ K+
Sbjct: 383 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLVASAAKD 423


>SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1)
          Length = 269

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +1

Query: 193 EGVCSHRCLSGSGCAGRGRLIYQNVDQG---CRRT 288
           +  C HRC+ G  C GR   +  +  +G   C RT
Sbjct: 174 QSCCGHRCVFGKSCYGRSCDLTSDCSEGESCCHRT 208


>SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096)
          Length = 191

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +1

Query: 193 EGVCSHRCLSGSGCAGRGRLIYQNVDQG---CRRT 288
           +  C HRC+ G  C GR   +  +  +G   C RT
Sbjct: 96  QSCCGHRCVFGKSCYGRSCDLTSDCSEGESCCHRT 130


>SB_42200| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 450

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151
           LVDV ID+   A+ P   Q        +FD + L A++ K+
Sbjct: 4   LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLAASAAKD 44


>SB_42880| Best HMM Match : Laminin_II (HMM E-Value=2.1)
          Length = 647

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151
           LVDV ID+   A+ P   Q        +FD + L A++ K+
Sbjct: 325 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLAASAAKD 365


>SB_11570| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 457

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 273 LVDVLIDESSSASTPRARQATMRAYTFIFDAIYLVANSRKN 151
           LVDV ID+   A+ P   Q        +FD + L A++ K+
Sbjct: 390 LVDVYIDDFYGAAMPDVSQDEFNRMNSVFDELGLAASAAKD 430


>SB_33499| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 486

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 115 RQYFRHTSNALVIFSRIRH*INRIKYEGVCSHRCLS 222
           R + RH ++   +F R+ H  NR++Y+G  ++ C++
Sbjct: 367 RSHVRHEAS---LFGRMNHYENRVEYKGFTANICIA 399


>SB_23592| Best HMM Match : Papilloma_E5 (HMM E-Value=2.7)
          Length = 165

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 312 RAAVRQT*SPSASLVDVLIDESSSASTPRARQATMRAYTF 193
           R ++R T SPS+SL        S +  PR RQ  ++AY F
Sbjct: 16  RTSMRSTLSPSSSLKG-----KSPSRLPRVRQGELKAYRF 50


>SB_51094| Best HMM Match : VWA (HMM E-Value=0)
          Length = 3544

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -2

Query: 315  IRAAVRQT*SPSASLVDVLIDESSSASTPRARQATMRAYTFIFD 184
            +  A+RQ+ S +++L + L +     +TP  R+++ +A   I D
Sbjct: 2319 VNKAIRQSLSGNSNLEEALTNAKKILNTPNTRKSSRKAVVIITD 2362


>SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)
          Length = 245

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -3

Query: 167 RILEKITSAFDVCRKYCLYTHWRRRRLPTMTRLDENVRTKTTDCN 33
           R L+ + SA  VC +YCLY  W R R  ++  +   + T  TD N
Sbjct: 100 RQLQALDSA--VCGQYCLYFLWHRARNKSLQDI-TTMFTPHTDWN 141


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,145,543
Number of Sequences: 59808
Number of extensions: 338596
Number of successful extensions: 765
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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