Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0100
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    23   2.9  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    23   2.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   8.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   8.9  

>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = -3

Query: 461 RVREXXXXXXXXXXSRRPTGDNGRNVSNTVRLMTFSSFATTWLSLNWP*YALQCGRLKVR 282
           R+RE          SR P   +  N SNT + +  S+     + +N    A +  ++K+ 
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNTSNTSKTVILSNKGPEGIQIN----ATELQKIKLE 123

Query: 281 LH 276
           +H
Sbjct: 124 IH 125


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = -3

Query: 461 RVREXXXXXXXXXXSRRPTGDNGRNVSNTVRLMTFSSFATTWLSLNWP*YALQCGRLKVR 282
           R+RE          SR P   +  N SNT + +  S+     + +N    A +  ++K+ 
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNTSNTSKTIILSNKGPEGIQIN----ATELQKIKLE 123

Query: 281 LH 276
           +H
Sbjct: 124 IH 125


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 316 YGQFKDNHVVANELKVI 366
           Y Q K+N + AN +K++
Sbjct: 332 YAQHKENELYANLMKIV 348


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 316 YGQFKDNHVVANELKVI 366
           Y Q K+N + AN +K++
Sbjct: 370 YAQHKENELYANLMKIV 386


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 395 HYLLSASYFNNYQTXQGRIRELFRK 469
           HYL + S   NY   + +++E F K
Sbjct: 576 HYLDAKSSVQNYSLAKHQLKEAFVK 600


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 200 YALIVACLALGVLAEEDSSIRTSTKDAD 283
           Y     CLA+G+  E     R  TK+ D
Sbjct: 164 YCRYQKCLAMGMKREAVQEERQRTKERD 191


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 200 YALIVACLALGVLAEEDSSIRTSTKDAD 283
           Y     CLA+G+  E     R  TK+ D
Sbjct: 164 YCRYQKCLAMGMKREAVQEERQRTKERD 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,652
Number of Sequences: 438
Number of extensions: 3315
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)