Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0100
         (586 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60270.1 68418.m07554 lectin protein kinase family protein co...    31   0.75 
At3g45440.1 68416.m04905 lectin protein kinase family protein co...    27   7.0  
At2g37880.1 68415.m04650 expressed protein contains Pfam profile...    27   9.2  

>At5g60270.1 68418.m07554 lectin protein kinase family protein
           contains Pfam domains, PF00069: Protein kinase domain,
           PF00139: Legume lectins beta domain, and PF00138: Legume
           lectins alpha domain
          Length = 668

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 222 WLWVCWPRKTHLSERRPRMQTDFKSAALQRVLR 320
           W+  CW R + +  R PR+ T+F S  +++VL+
Sbjct: 557 WVSECWKRSSLIDARDPRL-TEFSSQEVEKVLK 588


>At3g45440.1 68416.m04905 lectin protein kinase family protein
           contains Legume lectins beta-chain signature,
           PROSITE:PS00307 and PS00108: Serine/Threonine protein
           kinases active-site signature, PROSITE:PS00108
          Length = 669

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 222 WLWVCWPRKTHLSERRPRMQTDFKSAALQRVLR 320
           W+  CW   + L  R PRM+ +  +  ++ VL+
Sbjct: 555 WVCECWKMASLLGARDPRMRGEISAEEVEMVLK 587


>At2g37880.1 68415.m04650 expressed protein contains Pfam profile
           PF04759: Protein of unknown function, DUF617
          Length = 247

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 198 CMLSSLPVWLWVCWPRKTHLSERR 269
           C+L S+PVW   C  RK   + RR
Sbjct: 143 CLLRSVPVWTMFCNGRKLGFAVRR 166


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,182
Number of Sequences: 28952
Number of extensions: 235562
Number of successful extensions: 532
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)