Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0099
         (645 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LER3 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q8TM64 Cluster: Predicted protein; n=1; Methanosarcina ...    33   7.8  

>UniRef50_A6LER3 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 707

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = -2

Query: 437 DLIQ*IKSTSK*NQSLTIQH*NLDKNLQIHAIFYLKKKKDISYLHNTLK 291
           +L+Q +KSTS    S  +    + +N  ++ IF +K+KK I YL   LK
Sbjct: 474 ELVQFVKSTSFVIDSFCVMGNKIYRNYDLNVIFPIKEKKHIGYLSILLK 522


>UniRef50_Q8TM64 Cluster: Predicted protein; n=1; Methanosarcina
           acetivorans|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 379

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
 Frame = -3

Query: 541 LISYTLFIMSQ--PDNFQYYNLFIILLKTNSFFLLPLILY 428
           +I+YTL I++   P+NF+ Y+L++ +L +  F LL  ++Y
Sbjct: 333 IITYTLGIITIFIPENFEIYSLYLFILLSIFFGLLTFVIY 372


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,084,622
Number of Sequences: 1657284
Number of extensions: 10267960
Number of successful extensions: 19976
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19966
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)