Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0099
(645 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_44626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 28 5.7
SB_23783| Best HMM Match : ABC_tran (HMM E-Value=6.7e-07) 28 5.7
SB_51902| Best HMM Match : Peptidase_A17 (HMM E-Value=8.4e-09) 27 9.9
SB_48759| Best HMM Match : Ribosomal_S15 (HMM E-Value=8.1) 27 9.9
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 9.9
SB_32986| Best HMM Match : Ribosomal_S15 (HMM E-Value=7.2) 27 9.9
SB_46699| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 9.9
SB_31953| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_19143| Best HMM Match : Ribosomal_S15 (HMM E-Value=4.1) 27 9.9
SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39) 27 9.9
>SB_53758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 353 IHAIFYLKKKKDISYLHNTLKLIQMQGHTAVFLLDTPML 237
+H FYL+KK + Y + L + ++ G + D+P+L
Sbjct: 886 VHDTFYLQKKFNDPYFKSHLTMAKISGKLLTAVADSPLL 924
>SB_44626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 263 VFLLDTPMLDIDSYIGDHI 207
V+LLD P+ +DS++G HI
Sbjct: 24 VYLLDDPLSAVDSHVGKHI 42
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 263 VFLLDTPMLDIDSYIGDHI 207
V+LLD P+ +DS++G HI
Sbjct: 691 VYLLDDPLSAVDSHVGKHI 709
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 263 VFLLDTPMLDIDSYIGDHI 207
V+LLD P+ +DS++G HI
Sbjct: 420 VYLLDDPLSAVDSHVGKHI 438
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 263 VFLLDTPMLDIDSYIGDHI 207
+FLLD P+ +D+++G HI
Sbjct: 544 IFLLDDPLSAVDAHVGQHI 562
>SB_23783| Best HMM Match : ABC_tran (HMM E-Value=6.7e-07)
Length = 210
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 263 VFLLDTPMLDIDSYIGDHI 207
V+LLD P+ +DS++G HI
Sbjct: 122 VYLLDDPLSAVDSHVGKHI 140
>SB_51902| Best HMM Match : Peptidase_A17 (HMM E-Value=8.4e-09)
Length = 370
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 ELTLTCCVGKKYLFFFLNKKSREFVNF--YQDSNVVLSTIGF 403
E+ TC + + + F++N + R+F+ F ++DS++ + F
Sbjct: 81 EVAFTCDIEQMFHSFYVNPEHRDFLRFLWFEDSDLTKPIVEF 122
>SB_48759| Best HMM Match : Ribosomal_S15 (HMM E-Value=8.1)
Length = 337
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 ELTLTCCVGKKYLFFFLNKKSREFVNF--YQDSNVVLSTIGF 403
E+ TC + + + F++N + R+F+ F ++DS++ + F
Sbjct: 248 EVAFTCDIEQMFHSFYVNPEHRDFLRFLWFEDSDLTKPIVEF 289
>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 1541
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 ELTLTCCVGKKYLFFFLNKKSREFVNF--YQDSNVVLSTIGF 403
E+ TC + + + F++N + R+F+ F ++DS++ + F
Sbjct: 389 EVAFTCDIEQMFHSFYVNPEHRDFLRFLWFEDSDLTKPIVEF 430
>SB_32986| Best HMM Match : Ribosomal_S15 (HMM E-Value=7.2)
Length = 331
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 ELTLTCCVGKKYLFFFLNKKSREFVNF--YQDSNVVLSTIGF 403
E+ TC + + + F++N + R+F+ F ++DS++ + F
Sbjct: 207 EVAFTCDIEQMFHSFYVNPEHRDFLRFLWFEDSDLTKPIVEF 248
>SB_46699| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 517
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 ELTLTCCVGKKYLFFFLNKKSREFVNF--YQDSNVVLSTIGF 403
E+ TC + + + F++N + R+F+ F ++DS++ + F
Sbjct: 47 EVAFTCDIEQMFHSFYVNPEHRDFLRFLWFEDSDLTKPIVEF 88
>SB_31953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 ELTLTCCVGKKYLFFFLNKKSREFVNF--YQDSNVVLSTIGF 403
E+ TC + + + F++N + R+F+ F ++DS++ + F
Sbjct: 92 EVAFTCDIEQMFHSFYVNPEHRDFLRFLWFEDSDLTKPIVEF 133
>SB_19143| Best HMM Match : Ribosomal_S15 (HMM E-Value=4.1)
Length = 338
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 ELTLTCCVGKKYLFFFLNKKSREFVNF--YQDSNVVLSTIGF 403
E+ TC + + + F++N + R+F+ F ++DS++ + F
Sbjct: 214 EVAFTCDIEQMFHSFYVNPEHRDFLRFLWFEDSDLTKPIVEF 255
>SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)
Length = 1607
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 ELTLTCCVGKKYLFFFLNKKSREFVNF--YQDSNVVLSTIGF 403
E+ TC + + + F++N + R+F+ F ++DS++ + F
Sbjct: 989 EVAFTCDIEQMFHSFYVNPEHRDFLRFLWFEDSDLTKPIVEF 1030
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,804,072
Number of Sequences: 59808
Number of extensions: 345193
Number of successful extensions: 534
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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