Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0099
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF273708-1|AAL35411.1|  118|Drosophila melanogaster PFTAIRE-inte...    29   5.4  
AE014297-475|AAF54113.3|  118|Drosophila melanogaster CG31483-PA...    29   5.4  
AY051572-1|AAK92996.1|  407|Drosophila melanogaster GH21941p pro...    29   7.1  
AE014297-2603|AAF55612.2|  917|Drosophila melanogaster CG31149-P...    29   7.1  

>AF273708-1|AAL35411.1|  118|Drosophila melanogaster
           PFTAIRE-interacting factor 2 protein.
          Length = 118

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 209 CDRLCSYLCLTLVCPTKTPQCVPAFELTLTCCV 307
           C   CS  C     P  TP C P  +    CCV
Sbjct: 46  CGPCCSPCCSPCCTPCCTPCCTPCCKCCTPCCV 78


>AE014297-475|AAF54113.3|  118|Drosophila melanogaster CG31483-PA
           protein.
          Length = 118

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 209 CDRLCSYLCLTLVCPTKTPQCVPAFELTLTCCV 307
           C   CS  C     P  TP C P  +    CCV
Sbjct: 46  CGPCCSPCCSPCCTPCCTPCCTPCCKCCTPCCV 78


>AY051572-1|AAK92996.1|  407|Drosophila melanogaster GH21941p
           protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 243 NVRHR*LHRRSHYCLMTSLDSGLRNSERY 157
           +VR   LHR +HY   TS  +GL +S R+
Sbjct: 281 HVRQLGLHRNAHYDSQTSATAGLSSSRRH 309


>AE014297-2603|AAF55612.2|  917|Drosophila melanogaster CG31149-PA
           protein.
          Length = 917

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 243 NVRHR*LHRRSHYCLMTSLDSGLRNSERY 157
           +VR   LHR +HY   TS  +GL +S R+
Sbjct: 791 HVRQLGLHRNAHYDSQTSATAGLSSSRRH 819


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,325,792
Number of Sequences: 53049
Number of extensions: 482299
Number of successful extensions: 1046
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)