Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0099
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016422-1|AAG24175.1|  335|Caenorhabditis elegans Seven tm rece...    28   6.5  
AF068720-5|AAC17788.1|  333|Caenorhabditis elegans Seven tm rece...    27   8.6  

>AF016422-1|AAG24175.1|  335|Caenorhabditis elegans Seven tm
           receptor protein 238 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 544 ELISYTLFIMSQPDNFQYYNLFIILLKTNSFFLLP 440
           EL+  TL I+  PD + Y  +FI++ + +   L P
Sbjct: 48  ELLFSTLDILLAPDAYSYDTIFIMITRADKLILPP 82


>AF068720-5|AAC17788.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 236 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/33 (33%), Positives = 23/33 (69%)
 Frame = -3

Query: 544 ELISYTLFIMSQPDNFQYYNLFIILLKTNSFFL 446
           ELI  TL ++ QP+ F Y ++++++ +T+ + L
Sbjct: 52  ELIFATLDLIVQPEFFSYSSVYLVIARTDRWNL 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,177,417
Number of Sequences: 27780
Number of extensions: 256265
Number of successful extensions: 544
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)