Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0098
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.33 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.0  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   5.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.0  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 297 MSLCLXPAS*FSYFQGVMPVFFLYSSSSGN 208
           +S+CL  AS  S    V+P+ F  SSSS N
Sbjct: 209 ISVCLCGASVHSESSKVLPLLFSVSSSSYN 238


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 193 QSVYWVPTRRRVQ-EEHRHHALEIAELRSWXETQTHMPS 306
           Q VYW+  R  +  +E    A ++A L  +  TQT+ PS
Sbjct: 339 QDVYWMHFRGLMDCDERFTRAYQVAVL-EYKGTQTNYPS 376


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 15/63 (23%), Positives = 25/63 (39%)
 Frame = +3

Query: 237 TPASRLGNS*TKKLAGDTNSYAK*CHYRSGXDLSPSQLQEESGANXTSAGATLHAEDSVL 416
           TP SR+G      + GD  S       R+G  LS +     +  +    G  +H + +  
Sbjct: 145 TPDSRVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNNPCSINSTSSQPVGTQIHQQTNHT 204

Query: 417 VFP 425
            +P
Sbjct: 205 FYP 207


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +3

Query: 351  QEESGANXTSAGATLHAEDSVLVFPKSNPR**SGTHIEKNVSINGSRPXAVSRGTWP 521
            ++E   +  S GA    ED   V P ++PR  + TH       N + P +  R   P
Sbjct: 891  RDEDERSFHSNGAKEEDEDKPSVSPLTSPRQPAETHAGSPCR-NSASPASSDRSGTP 946


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,290
Number of Sequences: 336
Number of extensions: 2075
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)