Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0098
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.66 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 304 SDVITDLDXILAHHSCKRNPEQTXQVLELH 393
           +D   DLD +  H S ++  EQT   +  H
Sbjct: 480 TDFYVDLDAVTGHQSQQQQEEQTQSRVRAH 509


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 470  ILFNVSSTSSSRVRFWKN 417
            +L+  SSTSSS +  WK+
Sbjct: 1409 VLYVTSSTSSSILLHWKS 1426


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 470  ILFNVSSTSSSRVRFWKN 417
            +L+  SSTSSS +  WK+
Sbjct: 1405 VLYVTSSTSSSILLHWKS 1422


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 424 GKTSTESSACSVAPALVSFAPDS 356
           G  +T SSA   +PA+ S + DS
Sbjct: 543 GNGNTNSSARDSSPAIESISVDS 565


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -1

Query: 518 PCASRYC 498
           PCAS+YC
Sbjct: 81  PCASKYC 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,396
Number of Sequences: 438
Number of extensions: 2451
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)