Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0096
(497 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 144 7e-34
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 134 1e-30
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 132 6e-30
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 120 1e-26
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 117 1e-25
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 117 2e-25
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 94 1e-18
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 88 1e-16
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 86 5e-16
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 74 2e-12
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 69 8e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 68 1e-10
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 68 1e-10
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 67 2e-10
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 66 5e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 65 7e-10
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 64 2e-09
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 64 2e-09
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 63 3e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 62 5e-09
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 62 7e-09
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 61 1e-08
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 61 2e-08
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 60 3e-08
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 60 3e-08
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 59 5e-08
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 59 6e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 57 2e-07
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 56 3e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 56 4e-07
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 55 1e-06
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 54 1e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 54 2e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 52 5e-06
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 51 1e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 51 2e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 50 3e-05
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 49 5e-05
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 49 7e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 7e-05
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 49 7e-05
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 48 1e-04
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 48 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 47 2e-04
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 47 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 5e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 46 6e-04
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 44 0.002
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 44 0.002
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.002
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 44 0.003
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 44 0.003
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 43 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 43 0.003
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 42 0.006
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 42 0.006
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 42 0.008
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 42 0.008
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 40 0.023
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 40 0.041
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.17
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.17
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.22
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.22
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.38
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 35 0.88
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 0.88
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 35 0.88
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 33 2.7
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.6
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 33 4.7
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 33 4.7
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 32 6.2
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 32 6.2
UniRef50_Q4UAL7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.2
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 144 bits (350), Expect = 7e-34
Identities = 68/79 (86%), Positives = 72/79 (91%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+I FFL SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIR
Sbjct: 93 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIR 152
Query: 434 GAIXLAKLLVLPVRRGYWG 490
GAI LAKL ++PVRRGYWG
Sbjct: 153 GAIILAKLSIVPVRRGYWG 171
Score = 60.5 bits (140), Expect = 2e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV+ KI LE IYLFSLPIKE E
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 92
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 134 bits (324), Expect = 1e-30
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 376
K + E L + +++ +FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 377 NGHIGLGVKCSKEVATAIRGAIXLAKLLVLPVRRGYWG 490
+GH+GLG+KC+KEVATAIRGAI + KL ++P+RRGYWG
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWG 144
Score = 64.9 bits (151), Expect = 1e-09
Identities = 26/39 (66%), Positives = 35/39 (89%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQ 66
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 132 bits (318), Expect = 6e-30
Identities = 63/79 (79%), Positives = 67/79 (84%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+I FFL SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIR
Sbjct: 33 IIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIR 92
Query: 434 GAIXLAKLLVLPVRRGYWG 490
GAI LAKL ++PV RGYWG
Sbjct: 93 GAIILAKLSIVPVCRGYWG 111
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 159 VPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
+PVTKLG L+ KI LE IYLFSLPIKE E
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESE 32
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 120 bits (290), Expect = 1e-26
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVL 466
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AI LAKL ++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 467 PVRRGYWG 490
P+R+GYWG
Sbjct: 108 PLRQGYWG 115
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 117 bits (282), Expect = 1e-25
Identities = 52/74 (70%), Positives = 61/74 (82%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR I +
Sbjct: 72 LLPGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIII 131
Query: 449 AKLLVLPVRRGYWG 490
AKL V+P+RRGYWG
Sbjct: 132 AKLSVIPIRRGYWG 145
Score = 57.6 bits (133), Expect = 1e-07
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +3
Query: 144 DQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQ 67
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 117 bits (281), Expect = 2e-25
Identities = 55/93 (59%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Frame = +2
Query: 215 EHLLVF-FTNQRIRVIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 391
EH+ +F + +++ F+ L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 392 LGVKCSKEVATAIRGAIXLAKLLVLPVRRGYWG 490
LGVK KEVA +I+G++ LAKL ++PVRRGYWG
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWG 161
Score = 56.0 bits (129), Expect = 4e-07
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +3
Query: 141 EDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
+D+ WVP TKLGRLV+ GKI LE I+LFSLPIKE +
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQ 82
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 94.3 bits (224), Expect = 1e-18
Identities = 43/78 (55%), Positives = 53/78 (67%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
++ S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIR
Sbjct: 54 IVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIR 113
Query: 434 GAIXLAKLLVLPVRRGYW 487
GAI AK + PVR G W
Sbjct: 114 GAIARAKCAIRPVRLGLW 131
Score = 40.7 bits (91), Expect = 0.018
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
++++ EW+P T +GRLV+ KI LE I+ FS I+E E
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPE 53
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 87.8 bits (208), Expect = 1e-16
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +2
Query: 338 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVLPVRRGYWG 490
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ LAKL +LPV RGYWG
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWG 111
Score = 32.3 bits (70), Expect = 6.2
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 144 DQKEWVPVTKLGRLVRXGKI 203
+ KEW+PVT LGRLV+ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 85.8 bits (203), Expect = 5e-16
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 394
+I FFL SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 68 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV+ KI LE IYLFSLPIKE E
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 67
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 391
+I FFL SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 21 IIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 32.3 bits (70), Expect = 6.2
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 198 KIDKLESIYLFSLPIKEFE 254
KI LE IYLFSLPIKE E
Sbjct: 2 KIKSLEEIYLFSLPIKESE 20
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 68.5 bits (160), Expect = 8e-11
Identities = 31/71 (43%), Positives = 48/71 (67%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ IR AI
Sbjct: 29 LLPGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDK 88
Query: 449 AKLLVLPVRRG 481
AKL ++PV RG
Sbjct: 89 AKLNMIPVMRG 99
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 68.1 bits (159), Expect = 1e-10
Identities = 33/87 (37%), Positives = 54/87 (62%)
Frame = +2
Query: 227 VFFTNQRIRVIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 406
+FF N ++ I F SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKLVNILF--GKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 407 SKEVATAIRGAIXLAKLLVLPVRRGYW 487
S + I+ A+ AKL + +RRGYW
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW 176
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 68.1 bits (159), Expect = 1e-10
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +2
Query: 251 RVIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 430
+++ FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI
Sbjct: 96 QIVDHFLK-TLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAI 154
Query: 431 R 433
+
Sbjct: 155 Q 155
Score = 57.2 bits (132), Expect = 2e-07
Identities = 23/36 (63%), Positives = 32/36 (88%)
Frame = +3
Query: 147 QKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQ 96
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI
Sbjct: 53 LLPDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAH 112
Query: 449 AKLLVLPVRRG 481
AKL ++ VR G
Sbjct: 113 AKLSLIKVRVG 123
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 65.7 bits (153), Expect = 5e-10
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = -2
Query: 496 LLPPVTSSDW*N*QLSKXNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLF 317
L+ PV S+ N QL + +S ++G G FLAAL QT++ V V +G++ LE L+GT L
Sbjct: 29 LVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLL 88
Query: 316 LYRHDLKNLIIQGRXEEEXND 254
L HDL++ ++Q +EE +D
Sbjct: 89 LDGHDLQHFVLQRAAQEEIDD 109
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.3 bits (152), Expect = 7e-10
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +2
Query: 314 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 436
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQG 41
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = -2
Query: 487 PVTSSDW*N*QLSKXNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYR 308
PVTSSDW N QL ++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L R
Sbjct: 113 PVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDR 172
Query: 307 HDLKNLIIQ 281
D+ N I+Q
Sbjct: 173 LDVHNFILQ 181
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 63.7 bits (148), Expect = 2e-09
Identities = 31/71 (43%), Positives = 48/71 (67%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI
Sbjct: 50 LLPKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRD 109
Query: 449 AKLLVLPVRRG 481
AK+ ++PVRRG
Sbjct: 110 AKMNIIPVRRG 120
Score = 35.1 bits (77), Expect = 0.88
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 150 KEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
+EW P T +G LV+ GKI ++ ++ +LPI E E
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPE 45
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = +2
Query: 284 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLV 463
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL +
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 464 LPVRRG 481
+ ++RG
Sbjct: 122 IEIKRG 127
Score = 32.7 bits (71), Expect = 4.7
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 153 EWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
EW P TKLG +V+ G+I + I+ IKE E
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPE 48
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 62.5 bits (145), Expect = 5e-09
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A
Sbjct: 83 LLPDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNA 142
Query: 449 AKLLVLPVRRG 481
A L V P++ G
Sbjct: 143 AYLNVNPIKMG 153
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 62.1 bits (144), Expect = 7e-09
Identities = 28/72 (38%), Positives = 45/72 (62%)
Frame = +2
Query: 266 FLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIX 445
+L P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI+ AI
Sbjct: 41 YLIPDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAID 100
Query: 446 LAKLLVLPVRRG 481
AKL ++ ++RG
Sbjct: 101 NAKLNIIEIKRG 112
Score = 36.3 bits (80), Expect = 0.38
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 150 KEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
+EW P T+LGRLV G+I + LP+KE++
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQ 37
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV+ KI LE IYLFSLPIKE E
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 92
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFK 352
+I FFL SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 93 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 60.9 bits (141), Expect = 2e-08
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+ AI +
Sbjct: 95 LLPGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDV 154
Query: 449 AKLLVLPVRRG 481
AKL ++ V RG
Sbjct: 155 AKLNIIEVDRG 165
Score = 32.7 bits (71), Expect = 4.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 156 WVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
W P T+LGR V+ G I +E LP+KE E
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAE 90
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 60.1 bits (139), Expect = 3e-08
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+I FL +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+
Sbjct: 81 IIDIFLGAALKDEVLKSLPEQKGTRVGQY--YKA----GDYNGHVITGLD---EVANTIQ 131
Query: 434 GAIXLAKLLVLPVRRGYWG 490
I L KL ++PV RGY G
Sbjct: 132 RVIILTKLPIVPVWRGYCG 150
Score = 35.1 bits (77), Expect = 0.88
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 162 PVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
P +KLG LV+ +I L IYLFSLPIKE E
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETE 80
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +
Sbjct: 44 LVPDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDI 103
Query: 449 AKLLVLPVRRG 481
AKL ++ V RG
Sbjct: 104 AKLNIIDVSRG 114
Score = 32.3 bits (70), Expect = 6.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 156 WVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
W P T+LG+ V G+ID ++ LP+KE E
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESE 39
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 59.3 bits (137), Expect = 5e-08
Identities = 37/109 (33%), Positives = 53/109 (48%)
Frame = +2
Query: 137 QGRPERVGSCHQTRPSCSXRKNRQTREHLLVFFTNQRIRVIXFFLXPSLNDEVLKIMPVQ 316
QG + P K + + +L + V F L L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSLPIKE-FEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 317 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLV 463
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+ L+ +LV
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 58.8 bits (136), Expect = 6e-08
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A
Sbjct: 64 LLPDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQ 123
Query: 449 AKLLVLPVRRG 481
A L V P++ G
Sbjct: 124 ALLNVGPIKLG 134
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIK 245
K + KEW+PVTKLGRLV+ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 56.4 bits (130), Expect = 3e-07
Identities = 35/76 (46%), Positives = 46/76 (60%)
Frame = +2
Query: 263 FFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 442
FFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ G
Sbjct: 28 FFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAV-GLS 84
Query: 443 XLAKLLVLPVRRGYWG 490
+ L + R Y G
Sbjct: 85 SWSSFLSSCLPRDYCG 100
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 56.0 bits (129), Expect = 4e-07
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = +2
Query: 239 NQRIRVIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 418
N++ +I FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 419 ATAI 430
ATAI
Sbjct: 143 ATAI 146
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 54.8 bits (126), Expect = 1e-06
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGAI L
Sbjct: 4 LLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGAIIL 57
Query: 449 AKLLVLPVRRGYWG 490
+ + G+ G
Sbjct: 58 DRSSIAIAWGGWSG 71
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 54.4 bits (125), Expect = 1e-06
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
K + KEW+P TKLG LV+ KI LE IYLFSLPIK E
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSE 92
Score = 52.4 bits (120), Expect = 5e-06
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFK 352
+I FFL SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 93 IIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 275 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK 454
P ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A AK
Sbjct: 69 PRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEAK 128
Query: 455 --LLVLPVRRGY 484
+ +P+ + Y
Sbjct: 129 KTAITVPITKDY 140
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.4 bits (120), Expect = 5e-06
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK-- 454
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 455 LLVLPV 472
L+ +P+
Sbjct: 72 LISVPI 77
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +2
Query: 275 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK 454
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 455 --LLVLPV 472
L+ +P+
Sbjct: 73 KQLVRIPI 80
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 278 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKL 457
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 458 LVLPVRR 478
++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +2
Query: 314 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVLPVRRG 481
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL ++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 35.9 bits (79), Expect = 0.51
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 150 KEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
+EW P TKLGRLV+ GKI ++ I I+E E
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPE 39
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 49.2 bits (112), Expect = 5e-05
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 266 FLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIX 445
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 446 LAK--LLVLPVR 475
AK L+ +P+R
Sbjct: 98 EAKKNLIRVPLR 109
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 48.8 bits (111), Expect = 7e-05
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = +2
Query: 242 QRIRVIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ V F L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 422 TAIRGAIXL 448
A+ I L
Sbjct: 76 IAVCRTIIL 84
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 48.8 bits (111), Expect = 7e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK 454
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAK 135
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 48.8 bits (111), Expect = 7e-05
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK--LL 460
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ ++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 461 VLPVRRG 481
+PV G
Sbjct: 79 TVPVENG 85
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 48.0 bits (109), Expect = 1e-04
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +2
Query: 308 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVLPVRRGYW 487
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AI LAKL ++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 488 G 490
G
Sbjct: 148 G 148
Score = 39.9 bits (89), Expect = 0.031
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 147 QKEWVPVTKLGRLVRXGKIDKLESIYLFSL 236
+ +W+P+TKLG LV+ KI LE IY FSL
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSL 80
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 156 WVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
W PVTKLGRLV+ GK+ ++ I+ F + IKEFE
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFE 67
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK--LL 460
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 461 VLPVRRG 481
+PV G
Sbjct: 77 EVPVING 83
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVL 466
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK ++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 467 PV 472
+
Sbjct: 71 KI 72
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK--LL 460
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L+
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 461 VLPVRRG 481
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 45.6 bits (103), Expect = 6e-04
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +2
Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 394
L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 71 LLSRLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 41.1 bits (92), Expect = 0.013
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +3
Query: 162 PVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
PVTKLGRLV+ GK+ ++ I+ F + IKE++
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQ 66
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 44.0 bits (99), Expect = 0.002
Identities = 33/79 (41%), Positives = 39/79 (49%)
Frame = +2
Query: 254 VIXFFLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+I FFL L DEVL+ M Q QRTR K F + + L V CSKEV TA +
Sbjct: 52 IIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQ 105
Query: 434 GAIXLAKLLVLPVRRGYWG 490
AI L L + GY G
Sbjct: 106 RAITLLSFL-FSTQTGYKG 123
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVL 466
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ ++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 467 PV 472
V
Sbjct: 246 TV 247
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +2
Query: 284 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK 454
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAK 87
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVL 466
+ ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A+ AK V+
Sbjct: 515 ERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRALVDAKKSVV 574
Query: 467 PV 472
V
Sbjct: 575 RV 576
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVL 466
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + A+ ++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 467 PV 472
V
Sbjct: 209 QV 210
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 43.2 bits (97), Expect = 0.003
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK-- 454
L ++++ I V K + G+R F A V +GD G +G G ++EV AI A AK
Sbjct: 59 LIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAAKKT 118
Query: 455 LLVLPVRRG 481
++ +P+R G
Sbjct: 119 MIRVPLREG 127
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVL 466
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ ++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 467 PV 472
V
Sbjct: 128 RV 129
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.3 bits (95), Expect = 0.006
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK 454
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEAR 99
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 42.3 bits (95), Expect = 0.006
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLL 460
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 461 VLPV 472
V+ V
Sbjct: 88 VIRV 91
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.9 bits (94), Expect = 0.008
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK 454
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 41.9 bits (94), Expect = 0.008
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI-RGAIXLAK- 454
L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI +G + K
Sbjct: 45 LLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKH 104
Query: 455 LLVLPVRRG 481
+ +P RG
Sbjct: 105 MFSVPRVRG 113
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 40.3 bits (90), Expect = 0.023
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVL 466
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 467 PV 472
V
Sbjct: 79 EV 80
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 39.5 bits (88), Expect = 0.041
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2
Query: 250 NSLIGKENK*MLSSLSIFPXRTRRPSLVTGTHSFWS 143
NSL GKE K + S + I P T PSLVTGTH F S
Sbjct: 18 NSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.17
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.5 bits (83), Expect = 0.17
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Frame = +2
Query: 146 PERVGSCHQTRPSCSXRKNRQTREHLLVFFTNQRIRVIXFFLXPS--LNDEVLKIMPVQK 319
P+ G+ + T S KN + ++ TN + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 320 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK--LLVLPV 472
+ G+R F A V +GD G +G G + EV AI+ A+ A+ L+ +P+
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRVPI 154
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.22
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 442 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 344
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 37.1 bits (82), Expect = 0.22
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK 454
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEAR 78
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.22
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 36.3 bits (80), Expect = 0.38
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 284 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR--GAIXLAKL 457
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR G L
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 458 LVLPV 472
+ +P+
Sbjct: 76 VTVPM 80
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 35.1 bits (77), Expect = 0.88
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 311 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVLPVRR 478
V QTR G + R + VAI G+ NG +GLG+ S E A A LA + PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 35.1 bits (77), Expect = 0.88
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 FLXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 430
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.1 bits (77), Expect = 0.88
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 293 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAK 454
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAAR 73
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 34.7 bits (76), Expect = 1.2
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLL 460
L ++L V QTR G+ + +G+ NG IGLG S + A+ A +A
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 461 VLPVRR 478
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 33.5 bits (73), Expect = 2.7
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 221 LLVFFTNQRIRVIXFFLXPSLN---DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 391
LL+F N + ++ F+ N ++++I + K + G+ RFK + IG N IG
Sbjct: 110 LLIF--NYNLFLLFFYKTNKYNKILQKIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIG 167
Query: 392 LGVKCSKEVATAIRGA 439
+GV + AI A
Sbjct: 168 IGVSKDFYLQEAINKA 183
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 293 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 32.7 bits (71), Expect = 4.7
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 311 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKLLVLPVRR 478
V QTR G+ V G+ +G +GLG+ S E + A+ A LA + P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 32.7 bits (71), Expect = 4.7
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +2
Query: 278 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKL 457
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 458 LVLPVRR 478
+ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 32.3 bits (70), Expect = 6.2
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = -2
Query: 352 LETCALSGTCLFLYRHDLKNLI----IQGRXEEEXNDSNSL 242
LE+CAL TC+ +Y HD+ ++ + + +E+ +D++ L
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSDAHGL 1005
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 32.3 bits (70), Expect = 6.2
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +2
Query: 278 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXLAKL 457
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 458 LVLPVRR 478
+ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 32.3 bits (70), Expect = 6.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 213 RVCRFFLXEQDGRVW*QEPTLSGLPCRAXDHGXDXDRVHEDRHGLYL 73
RV R++L + +W E + DHG D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
>UniRef50_Q4UAL7 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 700
Score = 31.9 bits (69), Expect = 8.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 278 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 442
+L +L ++ T+ G+ + AIGD NG+ G+G+ +V +A I
Sbjct: 471 NLKSFILSKKRMRSMTKEGRVYFIRVITAIGDGNGYFGIGIGYGNDVNSAKNAGI 525
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,844,201
Number of Sequences: 1657284
Number of extensions: 7566967
Number of successful extensions: 18712
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 18156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18700
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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