Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0096
         (497 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0386 + 33555682-33556344,33557138-33557299                      136   9e-33
07_01_0756 + 5819367-5820038,5820847-5821005                          132   2e-31
03_04_0238 - 19219040-19219218,19220296-19220350,19221606-192216...    46   2e-05
07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871     39   0.002
11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509...    29   2.1  
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811...    28   4.8  

>03_06_0386 + 33555682-33556344,33557138-33557299
          Length = 274

 Score =  136 bits (329), Expect = 9e-33
 Identities = 62/74 (83%), Positives = 67/74 (90%)
 Frame = +2

Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
           L P L DEV+KI PVQKQTRAGQRTRFKAFV +GDNNGH+GLGVKC+KEVATAIRGAI L
Sbjct: 81  LVPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIIL 140

Query: 449 AKLLVLPVRRGYWG 490
           AKL V+PVRRGYWG
Sbjct: 141 AKLSVVPVRRGYWG 154



 Score = 57.6 bits (133), Expect = 5e-09
 Identities = 22/39 (56%), Positives = 33/39 (84%)
 Frame = +3

Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
           ++++++WVPVTKLGRLV+ G+  K+E IYL SLP+KE +
Sbjct: 38  RQEEEKWVPVTKLGRLVKEGRFSKIEEIYLHSLPVKEHQ 76


>07_01_0756 + 5819367-5820038,5820847-5821005
          Length = 276

 Score =  132 bits (318), Expect = 2e-31
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = +2

Query: 269 LXPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIXL 448
           L P L DEV+KI PVQKQTRAGQRTRFKAFV +GD +GH+GLGVKC+KEVATAIRGAI L
Sbjct: 84  LVPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDGDGHVGLGVKCAKEVATAIRGAIIL 143

Query: 449 AKLLVLPVRRGYWG 490
           AKL V+PVRRGYWG
Sbjct: 144 AKLSVVPVRRGYWG 157



 Score = 57.6 bits (133), Expect = 5e-09
 Identities = 23/39 (58%), Positives = 33/39 (84%)
 Frame = +3

Query: 138 KEDQKEWVPVTKLGRLVRXGKIDKLESIYLFSLPIKEFE 254
           ++++++WVPVTKLGRLV+  KI K+E IYL SLP+KE +
Sbjct: 41  RQEEEKWVPVTKLGRLVKENKIHKIEEIYLHSLPVKEHQ 79


>03_04_0238 -
           19219040-19219218,19220296-19220350,19221606-19221690,
           19222068-19222798
          Length = 349

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 20/52 (38%), Positives = 33/52 (63%)
 Frame = +2

Query: 284 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
           ++ V+++  V K  + G++  F+A V +GD  GH+G+GV  +KEV  AI  A
Sbjct: 171 SERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKA 222


>07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871
          Length = 233

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +2

Query: 356 FVAIGDNNGHIGLGVKCSKEVATAIRGAIXLA 451
           FV +GD + HI LGVKC+K  AT + GAI LA
Sbjct: 2   FVVVGDGDSHIELGVKCAK--ATTMSGAIILA 31


>11_04_0439 +
           17749634-17749858,17750164-17750301,17750770-17750943,
           17751099-17751184,17751264-17751525,17751616-17751815,
           17753631-17754086,17754198-17754474,17754694-17754828,
           17754946-17755026,17756305-17756400,17756676-17756771,
           17756844-17756900,17756975-17757043,17757158-17757237,
           17758185-17758329,17758422-17758511,17758914-17758994,
           17759103-17759198,17759279-17759335,17759417-17759461,
           17759547-17759612,17760304-17760350,17762771-17762865,
           17763375-17763393,17763438-17763498,17763637-17763660
          Length = 1085

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 418 DFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHD 302
           +F+A LHT  +M   V      +E C LS    F+ +HD
Sbjct: 655 EFIAYLHTYVDMLHKVDEIGDTMEDCYLSSPIKFVSKHD 693


>04_04_0214 -
           23674270-23676858,23677574-23680843,23680941-23681119,
           23681200-23681559,23681645-23682086,23682199-23682332,
           23682479-23682680
          Length = 2391

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -3

Query: 396 PKPI*PLLSPMATN--ALKRVRCPARVCFCTGMILRTSSFRDGXRKKXMTRIL*LVKKTS 223
           P P+ P   PM +   AL +V   +++C     IL TSS+    R   +  I+ L K+  
Sbjct: 556 PVPVLPP-DPMQSGGQALLKVENISKMCNAVA-ILSTSSYHAAVRAGYIKNIVTLAKRVQ 613

Query: 222 KCS 214
           KCS
Sbjct: 614 KCS 616


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,040,209
Number of Sequences: 37544
Number of extensions: 224343
Number of successful extensions: 570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)