Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0093
         (391 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q60XQ4 Cluster: Putative uncharacterized protein CBG185...    33   1.5  
UniRef50_A2DU89 Cluster: GP63-like; n=2; Trichomonas vaginalis G...    32   3.4  
UniRef50_A4ECX2 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  
UniRef50_A6RDD3 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  

>UniRef50_Q60XQ4 Cluster: Putative uncharacterized protein CBG18570;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG18570 - Caenorhabditis
           briggsae
          Length = 673

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +3

Query: 174 LGEERGCYVFTQC*NPI*VNSHETNVQGSVCHLEDRPRHVKRESRELTELPHSSLRRCYS 353
           L E   C+V   C  P+  N  +  + GS CH +      K+E R +  + +S  RR YS
Sbjct: 485 LVEHTNCHVI--C--PLDNNLGQITLIGSTCHTKGSNPPNKKEQRNIESIQNSFTRRLYS 540

Query: 354 KQHGR 368
           +  GR
Sbjct: 541 RNLGR 545


>UniRef50_A2DU89 Cluster: GP63-like; n=2; Trichomonas vaginalis
           G3|Rep: GP63-like - Trichomonas vaginalis G3
          Length = 321

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 128 AVKKFIDSEISFLTNVIQAKSLRYP 54
           A+K+ ID+ I FL N I+ KSLR+P
Sbjct: 93  ALKQTIDNVIKFLQNTIKVKSLRFP 117


>UniRef50_A4ECX2 Cluster: Putative uncharacterized protein; n=1;
           Collinsella aerofaciens ATCC 25986|Rep: Putative
           uncharacterized protein - Collinsella aerofaciens ATCC
           25986
          Length = 137

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 21/77 (27%), Positives = 30/77 (38%)
 Frame = +1

Query: 52  DGYRSDFACITFVKKLISESINFLTAMANSIMRLGLRSVINLEKSAGVMFLPSVKIQYKL 231
           + YRS +    +   +I +         N I    L S+  L+ S GV  L  ++   K 
Sbjct: 14  NSYRSTWITDPYAVSIIKDVDRSDVVSENVIESPVLGSISPLQLSGGVKTLLLMRFDRKH 73

Query: 232 IHTKPTCKDRCVTWKTD 282
           I    TC D C  W  D
Sbjct: 74  IFNASTCGDNCAKWILD 90


>UniRef50_A6RDD3 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 333

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +1

Query: 82  TFVKKLISESINFLTAMANSIMRLGLRSVINLEKSAGVMFLPSVKIQYKLIHTK 243
           TF+   I  ++NF+    N  + LGL   +N +   GV+F PS    Y  I  K
Sbjct: 124 TFIVDPIDGTVNFVHGFPNFCISLGL--TVNRQPVVGVVFNPSTAALYSAIRGK 175


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,414,685
Number of Sequences: 1657284
Number of extensions: 6892721
Number of successful extensions: 15783
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15783
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)