Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0093
         (391 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    25   0.20 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   0.81 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   0.81 

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 25.4 bits (53), Expect = 0.20
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 252 QGSVCHLEDRP 284
           QG+VCHLE RP
Sbjct: 134 QGAVCHLETRP 144


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 0.81
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +3

Query: 288 HVKRESRELTELPHSSL 338
           +VKR+S+E+++LP S L
Sbjct: 236 NVKRKSKEISKLPKSML 252


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 0.81
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +3

Query: 288 HVKRESRELTELPHSSL 338
           +VKR+S+E+++LP S L
Sbjct: 236 NVKRKSKEISKLPKSML 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,516
Number of Sequences: 336
Number of extensions: 1701
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)