Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0093
         (391 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   5.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   5.2  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    22   6.9  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 273 EDRPRHVKRESRELTELPHSSLRRCY-SKQH-GRP 371
           EDR  H K     LT     ++ R + S+ H GRP
Sbjct: 259 EDRATHAKSRIESLTRACDETMSRVFPSQDHTGRP 293


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 82   LYRRNHSDIHRTRRGDTQSEQ 20
            L+R N     RTRRG  ++E+
Sbjct: 1061 LFRSNRGRARRTRRGRRRAEE 1081


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 318 ELPHSSLRRCYSKQHG 365
           E+ HSSL +  S+QHG
Sbjct: 308 EIKHSSLYQQTSRQHG 323


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,949
Number of Sequences: 2352
Number of extensions: 7198
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)