Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0091
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_02_0031 - 5832475-5832696,5832789-5833064,5833303-5833380,583... 35 0.071
02_02_0121 + 7005356-7005418,7007533-7007632,7007713-7007810,700... 34 0.12
01_01_0653 - 4981517-4981738,4981841-4981976,4982066-4982121,498... 31 0.87
05_01_0177 + 1231679-1231753,1232259-1232546,1232608-1232685,123... 30 2.0
02_05_0977 - 33239887-33240566,33241010-33241985 30 2.0
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 29 3.5
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 3.5
01_04_0006 - 15001969-15002078,15002160-15002224,15002324-150024... 29 3.5
01_01_0620 - 4621291-4621379,4621722-4621803,4622238-4622282,462... 29 3.5
09_03_0057 + 11944973-11947159 29 4.7
12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146... 29 6.2
10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022 29 6.2
03_02_0312 - 7326092-7326148,7326415-7326540,7327744-7327821,732... 29 6.2
01_01_0942 + 7428384-7429536,7429623-7430335 29 6.2
10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696 28 8.1
05_06_0042 - 25131962-25132149,25132261-25132345,25132750-251327... 28 8.1
01_03_0020 - 11698429-11699126,11699557-11700532 28 8.1
>05_02_0031 -
5832475-5832696,5832789-5833064,5833303-5833380,
5833464-5833550,5833639-5833699,5833792-5833880,
5834001-5834098,5834197-5834296,5834876-5834953
Length = 362
Score = 35.1 bits (77), Expect = 0.071
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 3 GANVLARFALIHPKKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWH 182
GA VL FA + ++V L L++ W EW Y K+ + G V + LL
Sbjct: 134 GAYVLTLFATKYRERVIGLMLVSPLCRAPSWSEWLYNKVLLNLIYYYGTRGLVKECLLQR 193
Query: 183 HFGRFPEDR 209
+F + ++R
Sbjct: 194 YFSKLLDER 202
>02_02_0121 +
7005356-7005418,7007533-7007632,7007713-7007810,
7007933-7008021,7008111-7008171,7008253-7008339,
7008409-7008486,7008583-7008639,7008731-7008786,
7008877-7009012,7009103-7009324
Length = 348
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 3 GANVLARFALIHPKKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWH 182
GA +L FA + +V L L++ W EW Y K+ + L GM V + LL
Sbjct: 129 GAYILTLFAAKYRDRVLGLILVSPLCKPPTWTEWFYNKVASNLLYYYGMCGLVKEGLLQR 188
Query: 183 HFGR 194
+F +
Sbjct: 189 YFSK 192
>01_01_0653 -
4981517-4981738,4981841-4981976,4982066-4982121,
4982228-4982284,4982373-4982450,4982533-4982619,
4982707-4982767,4982862-4982950,4983048-4983145,
4983242-4983341,4983983-4984042
Length = 347
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +3
Query: 3 GANVLARFALIHPKKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWH 182
GA +L FA + +V L L++ W EW Y K+ L G V + LL
Sbjct: 128 GAYILTLFATKYRDRVIGLMLVSPLCKAPSWSEWLYNKVLLNLLYYYGSRGLVKECLLQR 187
Query: 183 HF 188
+F
Sbjct: 188 YF 189
>05_01_0177 +
1231679-1231753,1232259-1232546,1232608-1232685,
1233458-1233673,1233862-1233981,1234079-1234804
Length = 500
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 398 FNGRLNPNNSTWMKISDCAMVLEEQPSKISEAFRLFLRARAMVRICNL 541
F G L NS+W+ IS A + + I++A R R +VR+ +L
Sbjct: 117 FRGYLLSENSSWLFISSAAFIYHCVGANITKARRALRALRGLVRLKSL 164
>02_05_0977 - 33239887-33240566,33241010-33241985
Length = 551
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 371 SPHVDDTVTFNGRLNPNNSTWMKISDC 451
SP +DTVT GR +PN +T + I C
Sbjct: 414 SPGQEDTVTAQGRSDPNQNTGISIHRC 440
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 245 HT*LNPSNLSMFIEAYVRRSDLGICRNADTIKVPVLN 355
H + P NL + ++R SD G+C+ D P LN
Sbjct: 234 HRDIKPDNLLLDRHGHLRLSDFGLCKPLDYSNFPDLN 270
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 243 NSSCTSGSDRGCGLRGNVRNDATKGSPARPGSCHGNEGTECSSS 112
+SS T G+D G G RG + GS +G+E SSS
Sbjct: 5 HSSVTPGNDSGSGRRGRGSGSGSGSGRRSRGSDRSGDGSEDSSS 48
>01_04_0006 -
15001969-15002078,15002160-15002224,15002324-15002409,
15003243-15003341,15003556-15003649,15004813-15004982,
15005322-15005417
Length = 239
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 540 KLQILTIALALKKRRNASEILLGCSSSTIAQSEIFIQVELFG 415
+L ++A+A+ KRR + + +GC + +++ EI V G
Sbjct: 152 RLDAASLAIAIMKRRLRARVFVGCDNQPLSRQEIMDLVNRSG 193
>01_01_0620 -
4621291-4621379,4621722-4621803,4622238-4622282,
4623701-4623892,4625224-4625337,4625430-4625561,
4626356-4626440,4626526-4626605,4626791-4627034,
4627376-4627617,4628232-4628315,4628427-4628601,
4629351-4629464,4630025-4630236
Length = 629
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 245 HT*LNPSNLSMFIEAYVRRSDLGICRNADTIKVPVLN 355
H + P NL + +++ SD G+C+ D K+ LN
Sbjct: 275 HRDIKPDNLLLDKNGHMKLSDFGLCKPIDCSKLSTLN 311
>09_03_0057 + 11944973-11947159
Length = 728
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 431 WMKISDCAMVLEEQPSKISEAFRLFLRARAMV--RICNLQASITKNILPLLYLNRLSIIN 604
W+ +SD V ++++ F F A M +CNLQ S+T++I+ +L L +
Sbjct: 290 WISVSDDFNV-----KRLTKEFIEFALANWMQSDNLCNLQQSLTESIVKFRFLLVLDDVW 344
Query: 605 YDVYLN 622
DVY N
Sbjct: 345 DDVYAN 350
>12_01_0199 -
1467137-1467172,1467302-1467391,1468304-1468396,
1468488-1469515,1470005-1470552,1470656-1470695,
1473774-1475196
Length = 1085
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 517 GYGKNL*FTSFNHKKYITTTLPQQIKYY*LRCIFKYEINIKTKNIFN 657
G NL +T +HK Y+ + + + Y C+++YE + +++F+
Sbjct: 644 GGSANLGYTQRDHKNYLRSRRQRDLLYDFSACMYEYEEKEEFEDVFD 690
>10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022
Length = 587
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +2
Query: 83 PGRMDRVGLPED--EHSVPS---FPWHDPGRAGLPFVASFRTFPRRPQPR 217
PGR+D P S PS P PG AG+P+ + F + P P P+
Sbjct: 35 PGRLDWANQPNPFLRFSPPSQIPLPNPPPGIAGIPYPSLFHSPPPPPSPQ 84
>03_02_0312 -
7326092-7326148,7326415-7326540,7327744-7327821,
7327916-7328178,7328699-7328741,7329581-7329632,
7329705-7329871,7330135-7330194,7330291-7330374,
7330654-7330758,7330840-7330899,7330976-7331032
Length = 383
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 216 RGCGLRGNVRNDATKG--SPARPGSCHGNEGTECSSSGKPTRS 94
R G GN+ ATK +PA+P + NEG+ S SG + S
Sbjct: 144 RSKGSLGNLDVVATKNKKAPAKPSASSSNEGSSHSESGSGSSS 186
>01_01_0942 + 7428384-7429536,7429623-7430335
Length = 621
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 374 PHVDDTVTFNGRLNPNNSTWMKISDCAMV 460
P ++TVT GR +PN ST + + C ++
Sbjct: 474 PGQENTVTAQGRRDPNQSTGISVHGCRLL 502
>10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696
Length = 693
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 412 ETSVEGNRVVYVR*QSTRDVQHRHLDGV 329
+T E + +VY+ + RD++HR LDG+
Sbjct: 94 DTRSECDELVYIPQEKLRDLEHRSLDGM 121
>05_06_0042 -
25131962-25132149,25132261-25132345,25132750-25132797,
25133084-25133197,25133279-25133410,25134029-25134124,
25134771-25135005,25135054-25135322,25135408-25135491,
25136529-25136703,25138018-25138229
Length = 545
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 254 LNPSNLSMFIEAYVRRSDLGICRNADTIKVPVLN 355
+ P NL + +++ SD G+C+ D+ P LN
Sbjct: 249 IKPDNLLLDRSGHLKLSDFGLCKPLDSSNFPNLN 282
>01_03_0020 - 11698429-11699126,11699557-11700532
Length = 557
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 386 DTVTFNGRLNPNNSTWMKISDCAMV 460
+TVT GR +PN +T I CA+V
Sbjct: 419 NTVTAQGRTDPNQNTGTTIQGCAIV 443
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,611,256
Number of Sequences: 37544
Number of extensions: 492262
Number of successful extensions: 1493
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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