Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0090
(426 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_02_0031 - 5832475-5832696,5832789-5833064,5833303-5833380,583... 34 0.042
02_02_0121 + 7005356-7005418,7007533-7007632,7007713-7007810,700... 34 0.042
01_01_0653 - 4981517-4981738,4981841-4981976,4982066-4982121,498... 31 0.29
10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022 29 2.1
03_02_0312 - 7326092-7326148,7326415-7326540,7327744-7327821,732... 29 2.1
10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696 28 2.7
01_01_0620 - 4621291-4621379,4621722-4621803,4622238-4622282,462... 28 2.7
03_06_0636 - 35215034-35215336,35215417-35215584,35215599-352157... 28 3.6
11_06_0618 + 25565780-25566064,25566855-25567046,25567144-255674... 27 4.8
07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,744... 27 4.8
07_01_0270 + 1992810-1992923,1993852-1994061 27 4.8
06_01_0730 + 5370575-5370761,5371395-5371438,5372057-5372204,537... 27 4.8
06_01_0177 + 1383074-1383223,1383430-1383673,1383792-1383859,138... 27 4.8
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 27 4.8
12_01_1028 + 10541350-10541685,10542140-10542828,10542896-10542998 27 6.3
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 27 6.3
05_06_0042 - 25131962-25132149,25132261-25132345,25132750-251327... 27 6.3
05_03_0474 + 14481063-14481403,14481597-14481710,14483428-144836... 27 6.3
03_01_0138 - 1089063-1089266,1089590-1089671,1089937-1090390,109... 27 6.3
08_02_0669 + 19868149-19870179 27 8.3
03_06_0643 + 35248597-35250585,35250663-35250773,35250867-352509... 27 8.3
>05_02_0031 -
5832475-5832696,5832789-5833064,5833303-5833380,
5833464-5833550,5833639-5833699,5833792-5833880,
5834001-5834098,5834197-5834296,5834876-5834953
Length = 362
Score = 34.3 bits (75), Expect = 0.042
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 3 GANVLARFALIHPXKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWH 182
GA VL FA + +V L L++ W EW Y K+ + G V + LL
Sbjct: 134 GAYVLTLFATKYRERVIGLMLVSPLCRAPSWSEWLYNKVLLNLIYYYGTRGLVKECLLQR 193
Query: 183 HFGRFPEDR 209
+F + ++R
Sbjct: 194 YFSKLLDER 202
>02_02_0121 +
7005356-7005418,7007533-7007632,7007713-7007810,
7007933-7008021,7008111-7008171,7008253-7008339,
7008409-7008486,7008583-7008639,7008731-7008786,
7008877-7009012,7009103-7009324
Length = 348
Score = 34.3 bits (75), Expect = 0.042
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 3 GANVLARFALIHPXKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWH 182
GA +L FA + +V L L++ W EW Y K+ + L GM V + LL
Sbjct: 129 GAYILTLFAAKYRDRVLGLILVSPLCKPPTWTEWFYNKVASNLLYYYGMCGLVKEGLLQR 188
Query: 183 HFGR 194
+F +
Sbjct: 189 YFSK 192
>01_01_0653 -
4981517-4981738,4981841-4981976,4982066-4982121,
4982228-4982284,4982373-4982450,4982533-4982619,
4982707-4982767,4982862-4982950,4983048-4983145,
4983242-4983341,4983983-4984042
Length = 347
Score = 31.5 bits (68), Expect = 0.29
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +3
Query: 3 GANVLARFALIHPXKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWH 182
GA +L FA + +V L L++ W EW Y K+ L G V + LL
Sbjct: 128 GAYILTLFATKYRDRVIGLMLVSPLCKAPSWSEWLYNKVLLNLLYYYGSRGLVKECLLQR 187
Query: 183 HF 188
+F
Sbjct: 188 YF 189
>10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022
Length = 587
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +2
Query: 83 PGRMDRVGLPED--EHSVPS---FPWHDPGRAGLPFVASFRTFPRRPQPR 217
PGR+D P S PS P PG AG+P+ + F + P P P+
Sbjct: 35 PGRLDWANQPNPFLRFSPPSQIPLPNPPPGIAGIPYPSLFHSPPPPPSPQ 84
>03_02_0312 -
7326092-7326148,7326415-7326540,7327744-7327821,
7327916-7328178,7328699-7328741,7329581-7329632,
7329705-7329871,7330135-7330194,7330291-7330374,
7330654-7330758,7330840-7330899,7330976-7331032
Length = 383
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 216 RGCGLRGNVRNDATKG--SPARPGSCHGNEGTECSSSGKPTRS 94
R G GN+ ATK +PA+P + NEG+ S SG + S
Sbjct: 144 RSKGSLGNLDVVATKNKKAPAKPSASSSNEGSSHSESGSGSSS 186
>10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696
Length = 693
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 412 ETSVEGNRVVYVR*QSTRDVQHRHLDGV 329
+T E + +VY+ + RD++HR LDG+
Sbjct: 94 DTRSECDELVYIPQEKLRDLEHRSLDGM 121
>01_01_0620 -
4621291-4621379,4621722-4621803,4622238-4622282,
4623701-4623892,4625224-4625337,4625430-4625561,
4626356-4626440,4626526-4626605,4626791-4627034,
4627376-4627617,4628232-4628315,4628427-4628601,
4629351-4629464,4630025-4630236
Length = 629
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 245 HT*LNPSNLSMFIEAYVXRSDLGICRNADTIKVPVLN 355
H + P NL + ++ SD G+C+ D K+ LN
Sbjct: 275 HRDIKPDNLLLDKNGHMKLSDFGLCKPIDCSKLSTLN 311
>03_06_0636 -
35215034-35215336,35215417-35215584,35215599-35215799,
35215877-35215962,35216037-35216229,35216304-35216489
Length = 378
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 AHSIHPAWFDVQLI-NVSASTXLGWIRANLASTFAP 2
AH HP W+DV L+ A L W L ST +P
Sbjct: 302 AHVKHPNWYDVFLVFRAFAPDVLAWTFRLLLSTPSP 337
>11_06_0618 +
25565780-25566064,25566855-25567046,25567144-25567416,
25567636-25567738,25568273-25568391,25568615-25568782,
25568908-25569386,25569742-25569850,25569905-25570070,
25571405-25571433
Length = 640
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -2
Query: 131 GPSVHLLV--SPLDPSGLVRCAVDQCQRIY 48
G +H++V SP +PS + +C+ D+C +Y
Sbjct: 487 GRIMHMVVLPSPKEPSSIDQCSQDECVALY 516
>07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,
7440268-7440405,7440619-7440874,7440963-7441318,
7441421-7441709
Length = 1004
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 234 CTSGSDRGCGLRGNVRNDATKGSPARPGSCHGNEGTECSSSGKPTRSIRPGSMC 73
C+ G G G + + AT G G EGT C++S KP + C
Sbjct: 872 CSGGGGEGIGCGASKKPTATAVVAKCCGG--GGEGTRCAASKKPATAAVVAKCC 923
>07_01_0270 + 1992810-1992923,1993852-1994061
Length = 107
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +1
Query: 331 HHQ--GAGVE--HHGCSVTSRRRHGYLQRTSQP 417
HHQ G G+E H+GC +T R H ++QP
Sbjct: 65 HHQRKGCGLEGKHYGCLLTLRMSHQIWHDSAQP 97
>06_01_0730 +
5370575-5370761,5371395-5371438,5372057-5372204,
5372289-5372397,5373349-5373863,5374571-5374808,
5375296-5375560,5375740-5375844,5375950-5376015,
5376562-5377020,5377267-5377464,5378149-5378211
Length = 798
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 241 ISHVTEPQQPVDVH*GVRAALRPGYMPXRRH 333
+ H+++PQQ ++ V P +MP R H
Sbjct: 577 LQHMSQPQQAAQLYPPVHMQHYPNFMPYRHH 607
>06_01_0177 +
1383074-1383223,1383430-1383673,1383792-1383859,
1384044-1384091,1384188-1384312,1384461-1384569,
1384785-1384826
Length = 261
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 138 SRGMTQGVLDYL-LWHH-FGRFPEDRNHDLTQMYXNYFTRN*TPAT--CRCSLRRTCXA 302
+RG++ ++ YL W + G FP NHD + + F R T T C+ S C A
Sbjct: 183 NRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIA 241
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 243 NSXCTSGSDRGCGLRGNVRNDATKGSPARPGSCHGNEGTECSSS 112
+S T G+D G G RG + GS +G+E SSS
Sbjct: 5 HSSVTPGNDSGSGRRGRGSGSGSGSGRRSRGSDRSGDGSEDSSS 48
>12_01_1028 + 10541350-10541685,10542140-10542828,10542896-10542998
Length = 375
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 108 YQKMNTRSLRSRGMTQGVLDYLLWHHFGRFPEDRNHD 218
++ ++ SLR G+ +G + LW G P D HD
Sbjct: 322 FEMLDMTSLRRDGLCEG--EACLWEPKGHIPYDNRHD 356
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 245 HT*LNPSNLSMFIEAYVXRSDLGICRNADTIKVPVLN 355
H + P NL + ++ SD G+C+ D P LN
Sbjct: 234 HRDIKPDNLLLDRHGHLRLSDFGLCKPLDYSNFPDLN 270
>05_06_0042 -
25131962-25132149,25132261-25132345,25132750-25132797,
25133084-25133197,25133279-25133410,25134029-25134124,
25134771-25135005,25135054-25135322,25135408-25135491,
25136529-25136703,25138018-25138229
Length = 545
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 254 LNPSNLSMFIEAYVXRSDLGICRNADTIKVPVLN 355
+ P NL + ++ SD G+C+ D+ P LN
Sbjct: 249 IKPDNLLLDRSGHLKLSDFGLCKPLDSSNFPNLN 282
>05_03_0474 +
14481063-14481403,14481597-14481710,14483428-14483676,
14485844-14486225
Length = 361
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 83 PGRMDRVGLPEDEHSVPSFPWHDPGRAGLPFVASFRTFP 199
PGR S+P P+ P R L ASFR P
Sbjct: 25 PGRRTATAFAVRPRSLPDPPFQAPSRDRLTLPASFRRIP 63
>03_01_0138 -
1089063-1089266,1089590-1089671,1089937-1090390,
1091094-1091634
Length = 426
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 149 DPGRAGLPFVASFRTFPRRPQPRSDPDV 232
+P R G P +AS T R P P+ + ++
Sbjct: 223 EPSRTGTPIIASSPTSSRTPTPQRNAEI 250
>08_02_0669 + 19868149-19870179
Length = 676
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 230 HLGQIVVAVFGETSEMMPQKVVQHALGHATGTK 132
H G VVA+ G+T +MP A G A G+K
Sbjct: 612 HGGDAVVALLGKTPGLMPSLYALIADGGAQGSK 644
>03_06_0643 +
35248597-35250585,35250663-35250773,35250867-35250971,
35252215-35252304
Length = 764
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 293 VXRSDLGICRNADTIKVPVLNITGALSPHVDDTVTFNG 406
V R+ G C + I+VP+ + G L DD NG
Sbjct: 128 VVRAARGECSTSGDIEVPIFDDWGRLKIGEDDVAAING 165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,663,122
Number of Sequences: 37544
Number of extensions: 289939
Number of successful extensions: 946
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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