Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0090
(426 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132847-2|CAB63372.1| 343|Caenorhabditis elegans Hypothetical ... 93 1e-19
Z68135-1|CAA92227.1| 325|Caenorhabditis elegans Hypothetical pr... 64 5e-11
Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical pr... 30 0.60
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 1.1
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 28 3.2
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 4.3
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 4.3
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 4.3
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 4.3
U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical pr... 27 4.3
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 4.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 4.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 4.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 4.3
AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical ... 27 4.3
AC006714-7|AAK29718.3| 612|Caenorhabditis elegans Hypothetical ... 27 4.3
Z81542-8|CAB04417.2| 402|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 26 9.8
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 26 9.8
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 26 9.8
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 26 9.8
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 26 9.8
U88309-6|AAB42332.1| 389|Caenorhabditis elegans Hypothetical pr... 26 9.8
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 26 9.8
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 26 9.8
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 26 9.8
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 26 9.8
>AL132847-2|CAB63372.1| 343|Caenorhabditis elegans Hypothetical
protein Y48G10A.3 protein.
Length = 343
Score = 92.7 bits (220), Expect = 1e-19
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +3
Query: 3 GANVLARFALIHPXKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWH 182
GANVL R+A + +V AL L+NC S ++GW+EW Y+K NT LR GMT+ +DYL+WH
Sbjct: 135 GANVLLRYAAQNQNRVIALVLVNCCSGKSGWVEWGYEKWNTSYLRKVGMTKFTVDYLMWH 194
Query: 183 HFGRFPEDRNHDLTQMYXNYF 245
HFGR + + D+ + Y +F
Sbjct: 195 HFGRNYDRCSPDIVRQYRVFF 215
Score = 56.8 bits (131), Expect = 6e-09
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Frame = +2
Query: 203 RPQPRSDPDV----QXLFHT*LNPSNLSMFIEAYVXRSDLGICRNADT---IKVPVLNIT 361
R R PD+ + F NP++L+ FIE+Y+ R+ L I R+ T +KVPVL +
Sbjct: 198 RNYDRCSPDIVRQYRVFFQHLPNPNSLAEFIESYIQRTPLPISRDGTTGVQLKVPVLQLV 257
Query: 362 GALSPHVDDTVTFNGRLNP 418
GA S HV+DTV N +L+P
Sbjct: 258 GAGSAHVEDTVEVNTKLDP 276
>Z68135-1|CAA92227.1| 325|Caenorhabditis elegans Hypothetical
protein ZK1073.1 protein.
Length = 325
Score = 63.7 bits (148), Expect = 5e-11
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +3
Query: 3 GANVLARFALIHPXKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWH 182
GAN++ RFA+ HP ++ + L++CTS AG IE+ +K+ L + M+ G DYLL H
Sbjct: 116 GANIICRFAMGHPNRIMGIVLVHCTSTTAGIIEYCKEKVMNMRLENSIMSDGAWDYLLAH 175
Query: 183 HFGRFPEDRNHDLTQM 230
FG + R L ++
Sbjct: 176 KFGGESKSRQEYLEEL 191
Score = 34.3 bits (75), Expect = 0.037
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 254 LNPSNLSMFIEAYVXRSDLGICRNADTIKVPVLNITGALSPHVDDTVTFNGRLN 415
LNP NLS ++ A+ R+DL V L +TG+ + H+ T + +N
Sbjct: 195 LNPKNLSKYLVAFTKRTDLSSTIGTKLETVDALLVTGSKASHLHTVYTTHKSMN 248
>Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical
protein F49A5.5b protein.
Length = 400
Score = 30.3 bits (65), Expect = 0.60
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 191 TFPRRPQPRSDPDVQXLFHT*LNPSNLSMFIEAYVXRSDLGICRNADTIK---VPVLNIT 361
TF QP + +FHT PS L+ +Y + D + T+K +PV +
Sbjct: 54 TFILAKQPACETVTTSIFHTSTLPSTLTYASSSYSTKPDKSSIATSTTLKPKTLPVTTTS 113
Query: 362 GALSPHVD-DTVTFN 403
+LS H DT + +
Sbjct: 114 NSLSTHTKLDTTSIS 128
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 240 SXCTSGSDRGC---GLRGNVRNDATKGSPARPGSCHGNEGTECSSSGKP 103
S + GS +GC G G G P RPG+C GN G +G P
Sbjct: 99 SRVSGGSCQGCCLPGPPGTPGPAGRPGKPGRPGAC-GNHGNPGKPTGLP 146
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 228 SGSDRGCGLRGNVRNDATKGSPARPGS--CHGNEGTECSSSGKPTRSIRPGS 79
SG++ G RG+ N G+P R GS G +GT G+P +PGS
Sbjct: 169 SGNEGPTGPRGSPGNKGRDGNPGRDGSPGRPGRDGTR--GVGQPGSPGQPGS 218
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -1
Query: 243 NSXCTSGSDRGCGLRGNVRNDATKGSPARPG--SCHGNEGTECSSSGKPTRSIRP 85
N+ GS GC L G T G P RPG G G +P I P
Sbjct: 93 NTGSQGGSCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITP 147
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -1
Query: 243 NSXCTSGSDRGCGLRGNVRNDATKGSPARPG--SCHGNEGTECSSSGKPTRSIRP 85
N+ GS GC L G T G P RPG G G +P I P
Sbjct: 93 NTGSQGGSCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITP 147
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -1
Query: 243 NSXCTSGSDRGCGLRGNVRNDATKGSPARPG--SCHGNEGTECSSSGKPTRSIRP 85
N+ GS GC L G T G P RPG G G +P I P
Sbjct: 93 NTGSQGGSCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITP 147
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 216 RGCGLRGNVRNDATKGSPARPGSCHGNEGTECSSSGKPTRSIRPGSMCS*SMSAH 52
RG G G N +PA S GN T S G+ T ++ G C SAH
Sbjct: 511 RGPG-NGVTNNPRATTAPATRPSNQGNNSTSTSQCGQKT-EVKEGDTCFKIWSAH 563
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = -1
Query: 234 CTSGSDRGCGLRGNVRNDATKGSPARPGSCHGNEGTECSSSGKPTRSIRPGS 79
C G GLRG G+P PG NE + G +S R GS
Sbjct: 157 CPQGPPGEDGLRGEAGEPGRPGTPGDPGRPGTNEPGGIGARGPRGQSGRTGS 208
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 83 PGRMDRVGLPEDEHSVPSFPWHDPGRAGLPFVASFRTFPRRPQPRSDP 226
PG G P E+ V P PG GLP +P RP P
Sbjct: 708 PGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQP 755
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 83 PGRMDRVGLPEDEHSVPSFPWHDPGRAGLPFVASFRTFPRRPQPRSDP 226
PG G P E+ V P PG GLP +P RP P
Sbjct: 707 PGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQP 754
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 83 PGRMDRVGLPEDEHSVPSFPWHDPGRAGLPFVASFRTFPRRPQPRSDP 226
PG G P E+ V P PG GLP +P RP P
Sbjct: 707 PGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQP 754
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 83 PGRMDRVGLPEDEHSVPSFPWHDPGRAGLPFVASFRTFPRRPQPRSDP 226
PG G P E+ V P PG GLP +P RP P
Sbjct: 708 PGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQP 755
>U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical
protein K02E10.6 protein.
Length = 201
Score = 27.5 bits (58), Expect = 4.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 89 RMDRVGLPEDEHSVPSFPWHDPGR 160
++D++G ++ P +PW DP R
Sbjct: 153 KIDQIGRHDEPPKPPKYPWQDPWR 176
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 83 PGRMDRVGLPEDEHSVPSFPWHDPGRAGLPFVASFRTFPRRPQPRSDP 226
PG G P E+ V P PG GLP +P RP P
Sbjct: 744 PGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQP 791
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 5741 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 5775
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 5936 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 5970
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 6092 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 6126
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 6526 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 6560
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V + L P
Sbjct: 6014 ETSEVQPAEIVEHKDVQVPETSAPTVEPTIEKLAP 6048
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 5761 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 5795
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 5956 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 5990
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 6112 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 6146
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 6546 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 6580
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V + L P
Sbjct: 6034 ETSEVQPAEIVEHKDVQVPETSAPTVEPTIEKLAP 6068
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 5761 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 5795
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 5956 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 5990
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 6112 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 6146
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V V L P
Sbjct: 6546 ETSEVQPAEIVEHKDVQVPETSSPTVEPTVEKLAP 6580
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 197 ETSEMMPQKVVQHALGHATGTKGPSVHLLVSPLDP 93
ETSE+ P ++V+H T P+V + L P
Sbjct: 6034 ETSEVQPAEIVEHKDVQVPETSAPTVEPTIEKLAP 6068
>AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical
protein ZK1055.7 protein.
Length = 570
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 286 GVRAALRPGYMPXRRHHQGAG-VEHHGCSVTSRRRHGYLQRTSQP 417
GV A+R Y P +++H+ G + H +VT + R QP
Sbjct: 437 GVDTAIRVEYKPAKKYHEEGGYITKHSANVTEQTISIKNTRNEQP 481
>AC006714-7|AAK29718.3| 612|Caenorhabditis elegans Hypothetical
protein Y119D3B.11 protein.
Length = 612
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 152 GHATGTKGPSVHLLVSPLDPSGLVRCAVDQC 60
G ++ TKG SV SP +P G ++CA+ QC
Sbjct: 81 GKSSKTKGISVF---SPNEPIGTLKCALVQC 108
>Z81542-8|CAB04417.2| 402|Caenorhabditis elegans Hypothetical
protein F49A5.5a protein.
Length = 402
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +2
Query: 191 TFPRRPQPRSDPDV--QXLFHT*LNPSNLSMFIEAYVXRSDLGICRNADTIK---VPVLN 355
TF QP + + +FHT PS L+ +Y + D + T+K +PV
Sbjct: 54 TFILAKQPACETGIVTTSIFHTSTLPSTLTYASSSYSTKPDKSSIATSTTLKPKTLPVTT 113
Query: 356 ITGALSPHVD-DTVTFN 403
+ +LS H DT + +
Sbjct: 114 TSNSLSTHTKLDTTSIS 130
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 26.6 bits (56), Expect = 7.4
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -1
Query: 225 GSDRGCGLRGNVRNDATKGSPARPG-SCHGNEGTECSSSGKPTRS 94
G D G++G D T G +PG S G GT+ P RS
Sbjct: 518 GQDGSPGIQGPPGRDGTSGPDGQPGVSAPGAPGTDGGYCPCPKRS 562
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 26.2 bits (55), Expect = 9.8
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = -1
Query: 225 GSDRGCGLRGNVRNDATKGSPARPG--SCHGNEGTECSSSGKPTRSIRP 85
GS GC L G T G P RPG G G +P I P
Sbjct: 99 GSCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITP 147
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 107 LPEDEHSVPSFPWHDPGRAGLPFVASF 187
L D+++ PW +PG+ G P + F
Sbjct: 1448 LSADQYTQIKDPWDEPGKPGRPEITDF 1474
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 107 LPEDEHSVPSFPWHDPGRAGLPFVASF 187
L D+++ PW +PG+ G P + F
Sbjct: 1977 LSADQYTQIKDPWDEPGKPGRPEITDF 2003
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 107 LPEDEHSVPSFPWHDPGRAGLPFVASF 187
L D+++ PW +PG+ G P + F
Sbjct: 1658 LSADQYTQIKDPWDEPGKPGRPEITDF 1684
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 107 LPEDEHSVPSFPWHDPGRAGLPFVASF 187
L D+++ PW +PG+ G P + F
Sbjct: 1448 LSADQYTQIKDPWDEPGKPGRPEITDF 1474
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 107 LPEDEHSVPSFPWHDPGRAGLPFVASF 187
L D+++ PW +PG+ G P + F
Sbjct: 1977 LSADQYTQIKDPWDEPGKPGRPEITDF 2003
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 107 LPEDEHSVPSFPWHDPGRAGLPFVASF 187
L D+++ PW +PG+ G P + F
Sbjct: 1658 LSADQYTQIKDPWDEPGKPGRPEITDF 1684
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
T08A11.1 protein.
Length = 1872
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 81 NQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWHHFGRFPEDRNHDLTQMYXNY 242
N+ + WA+ + + R + ++ DYLL F D+N LTQ+Y ++
Sbjct: 1804 NRPPFFYWAWNHLLSNRYRGQ-CSEKFQDYLL-SEFRAVCSDKNDTLTQLYSDF 1855
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 107 LPEDEHSVPSFPWHDPGRAGLPFVASF 187
L D+++ PW +PG+ G P + F
Sbjct: 867 LSADQYTQIKDPWDEPGKPGRPEITDF 893
>U88309-6|AAB42332.1| 389|Caenorhabditis elegans Hypothetical
protein T23B3.1 protein.
Length = 389
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 301 LRPGYMPXRRHHQGAGVEHHGCSVTSRRRHGYLQ 402
+R G++P RRH ++ V + RHG+LQ
Sbjct: 86 MRDGFLPFRRHKNRFDLQE---IVFDKTRHGFLQ 116
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 26.2 bits (55), Expect = 9.8
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 8/51 (15%)
Frame = -1
Query: 207 GLRGNVRNDATKGSPARPGSCH------GNEGT--ECSSSGKPTRSIRPGS 79
G G ND T G P PG GN G E + G P RPG+
Sbjct: 183 GPPGTAGNDGTPGQPGAPGQVRTVPAPPGNPGQPGEPGAQGPPGEDGRPGN 233
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 234 CTSGSDRGCGLRGNVRNDATKGSPARPGS--CHGNEGTECSSSGKPTRSIRPGS 79
C G GL G+ + G P +PGS G +G + +G P + PG+
Sbjct: 151 CPQGPPGAPGLPGDQGDKGEAGQPGQPGSDAAPGEQGPK-GPNGAPGKPGAPGA 203
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 234 CTSGSDRGCGLRGNVRNDATKGSPARPGS--CHGNEGTECSSSGKPTRSIRPGS 79
C G GL G+ + G P +PGS G +G + +G P + PG+
Sbjct: 151 CPQGPPGAPGLPGDQGDKGEAGQPGQPGSDAAPGEQGPK-GPNGAPGKPGAPGA 203
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 81 NQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWHHFGRFPEDRNHDLTQMYXNY 242
N+ + WA+ + + R + ++ DYLL F D+N LTQ+Y ++
Sbjct: 1804 NRPPFFYWAWNHLLSNRYRGQ-CSEKFQDYLL-SEFRAVCSDKNDTLTQLYSDF 1855
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,261,759
Number of Sequences: 27780
Number of extensions: 232545
Number of successful extensions: 953
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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