Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0085
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.92 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   1.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 263 VYPHPAPEGCTSASSESAPSDQPIYPDTG 349
           VYP+     C   + E++ SD P +P  G
Sbjct: 191 VYPNNDGTKCLVVTDEASISDAPFFPHRG 219


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 749 WLPTTFEKKRGHQT 708
           W+ + FE+KRG QT
Sbjct: 235 WMRSQFERKRGRQT 248


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 749 WLPTTFEKKRGHQT 708
           W+ + FE+KRG QT
Sbjct: 237 WMRSQFERKRGRQT 250


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 266 YPHP--APEGCTSASSESAPSDQPIYPDTG 349
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 266 YPHP--APEGCTSASSESAPSDQPIYPDTG 349
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 64  YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 677 TCTCLALTNVESGDRASSRRSLEAIKTNFQRALTKE 784
           T   + L ++ S +R + RR    +KT    ++TK+
Sbjct: 16  TLLVVLLVHISSSERVTRRRLRRPLKTTQSVSVTKD 51


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 543 CAFFFSTSLVTVLCRIGWCWASLV 472
           C ++F  +L+ +LC   +C A ++
Sbjct: 284 CIYYFYCALIILLCIYYFCRAFII 307


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 299  ASSESAPSDQPIYPD 343
            ASS  APS  P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,076
Number of Sequences: 336
Number of extensions: 3398
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)