Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0085
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 103 2e-22
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 86 3e-17
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 80 2e-15
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 38 0.007
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 38 0.007
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 36 0.037
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 36 0.049
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 1.1
09_04_0719 + 19716536-19716857,19716949-19717101,19717493-197177... 29 4.3
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 29 4.3
04_04_0482 - 25547393-25547455,25547767-25547866,25548154-255482... 28 7.5
03_06_0598 + 34977063-34977220,34977957-34978101,34978362-349784... 28 9.9
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 28 9.9
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 103 bits (247), Expect = 2e-22
Identities = 67/175 (38%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPLRSTNLPRHWT 351
NPLFEKRPK F IG + P +DL RFV P + +R K P R
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81
Query: 352 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQAGR 528
+ L F + ++ + P N
Sbjct: 82 KNLATNLFKMLLK--YRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLI 139
Query: 529 EEEGA-LVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKNMHML 690
E+ A LVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG++VH+K +L
Sbjct: 140 EQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVL 194
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 401
L + KWPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 44 LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE 98
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 674 RTCTCLALTNVESGDRASSRRSLEAIKTNF 763
+T + L LT V++ D+ + LEAIK NF
Sbjct: 189 KTASVLCLTTVKNEDKLEFSKILEAIKANF 218
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 86.2 bits (204), Expect = 3e-17
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +1
Query: 529 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKNMHML 690
+ + LVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG++VH+K +L
Sbjct: 126 QSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVL 179
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 401
L + +WPK +RIQRQ+ VL++RLKVPP +NQFT+TLDK ++L++ + E
Sbjct: 45 LHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLDKNLGCQKERLLKRAQAE 99
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGP 261
NPLFEKRPK F IG + P +DL RFV P
Sbjct: 23 NPLFEKRPKQFGIGGALPPRKDLHRFVRWP 52
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 674 RTCTCLALTNVESGDRASSRRSLEAIKTNF 763
+T + L LT V++ D+ + LEAIK+NF
Sbjct: 174 KTASVLCLTTVKNEDKLEFSKILEAIKSNF 203
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 401
L + KWPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 28 LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE 82
Score = 67.7 bits (158), Expect = 1e-11
Identities = 51/152 (33%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPLRSTNLPRHWT 351
NPLFEKRPK F IG + P +DL RFV P + +R K P R
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65
Query: 352 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQAGR 528
+ L F + ++ + P N
Sbjct: 66 KNLATNLFKMLLK--YRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLI 123
Query: 529 EEEGA-LVVIAHDVDPIELVLFLPALCRKMGV 621
E+ A LVVIAHDVDPIELV++LPALCRKM +
Sbjct: 124 EQSKAQLVVIAHDVDPIELVVWLPALCRKMEI 155
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 674 RTCTCLALTNVESGDRASSRRSLEAIKTNF 763
+T + L LT V++ D+ + LEAIK NF
Sbjct: 159 KTASVLCLTTVKNEDKLEFSKILEAIKANF 188
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
VV+A D +P+E++L LP L VPY V K LG
Sbjct: 52 VVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALG 88
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
VV+A D +P+E++L LP L VPY V K LG
Sbjct: 54 VVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALG 90
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 35.9 bits (79), Expect = 0.037
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 526 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL 654
R + L +IA ++ PI+++ +P LC + +PY V K L
Sbjct: 57 RRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDL 99
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 35.5 bits (78), Expect = 0.049
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 526 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL 654
R L VIA ++ PI+++ +P LC + +PY V K L
Sbjct: 57 RRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDL 99
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 269 PHPAPEGCTSASSESAPSDQP 331
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>09_04_0719 +
19716536-19716857,19716949-19717101,19717493-19717707,
19717785-19717855,19717998-19718157,19718598-19718790,
19718936-19719091,19719229-19719317,19719602-19719695,
19719870-19720039
Length = 540
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 285 SGAGCGYTWATYKSGQVTSWLNALTNSKVLWPLLEERIHDLLG 157
+GAG GY W ++++ +W A+ SK LW L + L G
Sbjct: 105 TGAGQGYLWMSHRTPGSDTWELAV-RSKQLWEELAAEVDGLGG 146
>01_05_0489 +
22652479-22653718,22653882-22654063,22654172-22654279,
22654364-22654467,22654570-22654657,22654760-22654870,
22654955-22655020,22656740-22656799,22656869-22657411,
22657646-22657765,22657845-22657964,22659083-22659136,
22659236-22659331,22660580-22660681
Length = 997
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 610 KMGVPYCIV-KGKSRLGALVHRKNMH-MLSSNKCGVW*PRFFSKVVGSHQDELSTS 771
K+G P CI KG R+G + +N H + + G + K+VGS+QDE + S
Sbjct: 834 KVGTPLCIPSKGFIRIGKIASIQNSHKQVDVAREG---EKVAIKIVGSNQDEANNS 886
>04_04_0482 -
25547393-25547455,25547767-25547866,25548154-25548203,
25548883-25548969,25549343-25549429,25549510-25550009,
25550061-25550134,25550548-25551632
Length = 681
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 601 LCRKMGVPYCIV-KGKSRLGALVHRKNMHMLSSNKCGVW*PR 723
LC G+P V K ++R+G + +K ++ +N C V PR
Sbjct: 165 LCLGSGLPTTTVGKPRNRMGTITFKKPKEVVGANVCSVSSPR 206
>03_06_0598 +
34977063-34977220,34977957-34978101,34978362-34978481,
34978640-34978774,34979138-34979213,34979398-34979450,
34979594-34979695,34979848-34979964,34980170-34980228,
34980810-34980984,34981628-34981762,34981855-34981953,
34982143-34982251,34982981-34983093,34983206-34983265,
34983821-34983835
Length = 556
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 731 EKKRGHQTP-HLLELSMCMFLRCTSAPRRDLP 639
E KR + P H+ EL C + TS PR +LP
Sbjct: 471 ESKRAYVVPQHVEELLKCYWPGTTSEPREELP 502
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 217 PDQ*QSSLASSRREDSRSSWAQPF*PPMGRR 125
P SSLA +RR +R AQP PP RR
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARR 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,381,531
Number of Sequences: 37544
Number of extensions: 410545
Number of successful extensions: 1239
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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