Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0085
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a pro... 118 2e-26
X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein. 118 2e-26
X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRN... 118 2e-26
M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein. 118 2e-26
BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a p... 118 2e-26
AL158826-10|CAI12834.1| 151|Homo sapiens ribosomal protein L7a ... 91 4e-18
AB056665-1|BAB39381.1| 142|Homo sapiens ribosomal protein L7a p... 91 4e-18
AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a p... 84 5e-16
Z83840-3|CAB46207.1| 128|Homo sapiens NHP2 non-histone chromoso... 44 8e-04
D50420-1|BAA23363.1| 128|Homo sapiens OTK27 protein. 44 8e-04
CR541725-1|CAG46526.1| 128|Homo sapiens NHP2L1 protein. 44 8e-04
CR456531-1|CAG30417.1| 128|Homo sapiens NHP2L1 protein. 44 8e-04
BC095439-1|AAH95439.1| 128|Homo sapiens NHP2 non-histone chromo... 44 8e-04
BC019282-1|AAH19282.1| 128|Homo sapiens NHP2L1 protein protein. 44 8e-04
BC005358-1|AAH05358.1| 128|Homo sapiens NHP2 non-histone chromo... 44 8e-04
AF155235-1|AAF06959.1| 128|Homo sapiens 15.5 kD RNA binding pro... 44 8e-04
AF091076-1|AAC72945.1| 128|Homo sapiens OTK27 protein. 44 8e-04
CR457238-1|CAG33519.1| 153|Homo sapiens NOLA2 protein. 38 0.042
BC006387-1|AAH06387.1| 153|Homo sapiens nucleolar protein famil... 38 0.042
BC000009-1|AAH00009.1| 153|Homo sapiens nucleolar protein famil... 38 0.042
AK000486-1|BAA91198.1| 153|Homo sapiens protein ( Homo sapiens ... 38 0.042
AJ293309-1|CAC08452.1| 153|Homo sapiens NHP2 protein protein. 38 0.042
AF401219-1|AAL02175.1| 153|Homo sapiens small nucleolar RNA bin... 38 0.042
X06704-1|CAA29888.1| 439|Homo sapiens protein ( Human mRNA for ... 31 6.4
>X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRNA.
).
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 118 bits (285), Expect = 2e-26
Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGPSISASSARRLYFSVV*KCPL---RSTNLPR 342
NPLFEKRPKNF IGQ IQP RDL+RFV P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 343 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQNSHQA 522
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 523 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 197
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 106
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 201
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNY 226
>AL158826-10|CAI12834.1| 151|Homo sapiens ribosomal protein L7a
protein.
Length = 151
Score = 91.1 bits (216), Expect = 4e-18
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +1
Query: 532 EEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 35 KKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 82
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 27 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 86
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 87 VAFTQVNSEDKGALAKLVEAIRTNY 111
>AB056665-1|BAB39381.1| 142|Homo sapiens ribosomal protein L7a
protein.
Length = 142
Score = 91.1 bits (216), Expect = 4e-18
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +1
Query: 532 EEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KGK+RLG LVHRK
Sbjct: 26 KKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRK 73
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 509 TVTKLVEKKKAHXXXXXXXXXXXXXXXXCQRYAVKWVYHTALSRASPASVHLYTARTCTC 688
TVT LVE KKA K + + L +TCT
Sbjct: 18 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTT 77
Query: 689 LALTNVESGDRASSRRSLEAIKTNF 763
+A T V S D+ + + +EAI+TN+
Sbjct: 78 VAFTQVNSEDKGALAKLVEAIRTNY 102
>AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a
protein.
Length = 191
Score = 84.2 bits (199), Expect = 5e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 237 LVQICKWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 404
L + KWP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 78 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 133
Score = 55.2 bits (127), Expect = 3e-07
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +1
Query: 172 NPLFEKRPKNFAIGQGIQPTRDLSRFVSGP 261
NPLFEKRPKNF IGQ IQP RDL+RFV P
Sbjct: 56 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWP 85
>Z83840-3|CAB46207.1| 128|Homo sapiens NHP2 non-histone chromosome
protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>D50420-1|BAA23363.1| 128|Homo sapiens OTK27 protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>CR541725-1|CAG46526.1| 128|Homo sapiens NHP2L1 protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>CR456531-1|CAG30417.1| 128|Homo sapiens NHP2L1 protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>BC095439-1|AAH95439.1| 128|Homo sapiens NHP2 non-histone
chromosome protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>BC019282-1|AAH19282.1| 128|Homo sapiens NHP2L1 protein protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>BC005358-1|AAH05358.1| 128|Homo sapiens NHP2 non-histone
chromosome protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>AF155235-1|AAF06959.1| 128|Homo sapiens 15.5 kD RNA binding
protein protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>AF091076-1|AAC72945.1| 128|Homo sapiens OTK27 protein.
Length = 128
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 547 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 657
+V+A D +P+E++L LP LC VPY V+ K LG
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 90
>CR457238-1|CAG33519.1| 153|Homo sapiens NOLA2 protein.
Length = 153
Score = 37.9 bits (84), Expect = 0.042
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 535 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
E ++V+A D PIE+ LP +C +PY + K+ LGA K
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSK 121
>BC006387-1|AAH06387.1| 153|Homo sapiens nucleolar protein family
A, member 2 (H/ACA small nucleolar RNPs) protein.
Length = 153
Score = 37.9 bits (84), Expect = 0.042
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 535 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
E ++V+A D PIE+ LP +C +PY + K+ LGA K
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSK 121
>BC000009-1|AAH00009.1| 153|Homo sapiens nucleolar protein family
A, member 2 (H/ACA small nucleolar RNPs) protein.
Length = 153
Score = 37.9 bits (84), Expect = 0.042
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 535 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
E ++V+A D PIE+ LP +C +PY + K+ LGA K
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSK 121
>AK000486-1|BAA91198.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ20479 fis, clone KAT07382. ).
Length = 153
Score = 37.9 bits (84), Expect = 0.042
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 535 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
E ++V+A D PIE+ LP +C +PY + K+ LGA K
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSK 121
>AJ293309-1|CAC08452.1| 153|Homo sapiens NHP2 protein protein.
Length = 153
Score = 37.9 bits (84), Expect = 0.042
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 535 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
E ++V+A D PIE+ LP +C +PY + K+ LGA K
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSK 121
>AF401219-1|AAL02175.1| 153|Homo sapiens small nucleolar RNA
binding-like protein NHP2 protein.
Length = 153
Score = 37.9 bits (84), Expect = 0.042
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 535 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRK 675
E ++V+A D PIE+ LP +C +PY + K+ LGA K
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSK 121
>X06704-1|CAA29888.1| 439|Homo sapiens protein ( Human mRNA for
trk-2h oncogene. ).
Length = 439
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 172 NPLFEKRPKNFAI 210
NPLFEKRPKNF I
Sbjct: 29 NPLFEKRPKNFGI 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,344,647
Number of Sequences: 237096
Number of extensions: 2199293
Number of successful extensions: 13263
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 12978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13261
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -