Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0084
         (748 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    38   0.20 
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   7.5  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 38.3 bits (85), Expect = 0.20
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 343 AGWWYLPARTHKRSCHQ 293
           A WWYLPARTHKRS H+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -2

Query: 375 RNALLLHGRNRQGGGTYPRGLTRGPATSNYANYNF 271
           RNALL+HG N  G  TY RGL    +   Y  + F
Sbjct: 114 RNALLVHGFNGSGNSTYMRGLAGHLSREGYRVFCF 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,410,646
Number of Sequences: 1657284
Number of extensions: 14109764
Number of successful extensions: 26870
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26868
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)