Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0083
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr...   112   2e-25
AC087079-16|AAO12401.2|  509|Caenorhabditis elegans Hypothetical...    30   1.5  
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF014939-3|AAB63927.1|  831|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z19154-7|CAE17740.1|  342|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical
           protein R11A8.6 protein.
          Length = 1141

 Score =  112 bits (270), Expect = 2e-25
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +2

Query: 2   SPVVKAENLRFKEEGVRDIVKDVFLPWYNAFRFLMQNVERLVQEDHVDYRFNEKAIRENV 181
           SPVV+ ENLRF+EEGVRD++KDVFLPW+NA+RF +QNV+    E    +  N     ENV
Sbjct: 631 SPVVRGENLRFREEGVRDLLKDVFLPWFNAYRFFVQNVQAYEHETGNVFDMNVHVASENV 690

Query: 182 MDKWITSFTQSLIQFVKKEMAAYR 253
           MD+WI SFT SL+ FV+KEM +YR
Sbjct: 691 MDRWIESFTNSLVAFVRKEMDSYR 714



 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 45/85 (52%), Positives = 61/85 (71%)
 Frame = +1

Query: 253 MYTVVPRLTKFIDHLTNWYVRMNRKRLKGDNGVQDCQVALDTLFGVLFDMVRVMAPFTPF 432
           +Y VV  LTKF D LTN Y+R+NRKR+KGDNG+ +   AL  L  VL  +VR+MAPFTPF
Sbjct: 715 LYAVVGPLTKFFDTLTNIYIRLNRKRVKGDNGLHEQHHALAALGRVLILIVRLMAPFTPF 774

Query: 433 LTEFMYKTLRKLLPGDSLDSVHFNM 507
             E+++  L+K++ G + +SVHF M
Sbjct: 775 FCEYIWLNLKKVI-GSTEESVHFLM 798



 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 34/65 (52%), Positives = 50/65 (76%)
 Frame = +3

Query: 510 PDPRIELVDTNIERAVQRMQSVIELGRVLRDRKTIPIKYPLPEMIVIHRDTXYLDDVKSL 689
           P P   L+D  +ER V+ M++VI+L R++RDR+ + +KYPL EMIVI+RD+ +L+DVKSL
Sbjct: 800 PKPDESLIDETVERRVEVMRNVIDLVRLVRDREGLAVKYPLKEMIVINRDSQFLEDVKSL 859

Query: 690 GKYVL 704
             Y+L
Sbjct: 860 ESYIL 864


>AC087079-16|AAO12401.2|  509|Caenorhabditis elegans Hypothetical
           protein Y37E3.16 protein.
          Length = 509

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 361 QVALDTLFGVLFDMVRVMAPFTP 429
           Q+AL+ +F +L D++ +M PFTP
Sbjct: 413 QIALNEVFSILKDIIVIMFPFTP 435


>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
           protein Y87G2A.5 protein.
          Length = 1050

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/58 (29%), Positives = 31/58 (53%)
 Frame = +1

Query: 307 YVRMNRKRLKGDNGVQDCQVALDTLFGVLFDMVRVMAPFTPFLTEFMYKTLRKLLPGD 480
           YV   +  L GDN     QVA+  L   +   +R+++P  PF++E +++ + +L   D
Sbjct: 807 YVETIKPVLYGDNTTLR-QVAISVLHKCIDTGLRLISPLMPFISEELWQRMPRLDDSD 863


>AF014939-3|AAB63927.1|  831|Caenorhabditis elegans Hypothetical
           protein ZC132.4 protein.
          Length = 831

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -3

Query: 450 IHKFSEERCKWCHNSDH 400
           +H+F ++RC +CH ++H
Sbjct: 801 LHEFQKKRCHYCHRTNH 817


>Z19154-7|CAE17740.1|  342|Caenorhabditis elegans Hypothetical
           protein C40H1.8 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 223 ICEERDGCL*MYTVVPRLTKFIDHL 297
           IC+E DG     T+ P  T++IDHL
Sbjct: 293 ICQEADGHYCSGTLKPNATQYIDHL 317


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,643,455
Number of Sequences: 27780
Number of extensions: 350863
Number of successful extensions: 815
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)