Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0081
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 34 0.11
11_01_0619 - 4961588-4962409 31 0.76
07_01_0733 + 5570084-5570282,5570395-5570600,5572484-5572624,557... 31 0.76
04_04_0923 + 29441740-29441980,29442321-29442401,29442630-294427... 31 0.76
11_06_0710 - 26492093-26493460 31 1.0
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 30 1.8
03_05_0226 - 22115285-22115404,22115477-22116661,22117037-221178... 30 1.8
07_03_1178 - 24580294-24580727,24581749-24582274 30 2.3
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 29 3.1
04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268 29 3.1
04_03_0550 + 17054155-17054182,17054438-17054503,17054504-17056959 29 3.1
01_05_0078 + 17931998-17932062,17933320-17933416,17933506-179336... 29 3.1
09_04_0644 + 19181335-19184424 29 4.1
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 29 4.1
01_06_1259 - 35810926-35811777 29 4.1
09_04_0600 + 18883094-18883393,18883606-18883755,18883851-188841... 29 5.4
06_03_1069 - 27345207-27345488,27345746-27346078,27346252-273470... 29 5.4
06_01_0906 + 6990892-6991615,6992480-6992679,6992822-6993002,699... 29 5.4
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 5.4
05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241 29 5.4
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733... 28 7.1
06_01_1104 + 9097108-9097779 28 7.1
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 28 7.1
04_04_1284 + 32376870-32376874,32376876-32376935,32377166-323773... 28 7.1
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 28 7.1
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731... 28 7.1
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904... 28 7.1
01_06_0235 - 27747908-27749023 28 7.1
04_04_1441 - 33621423-33622118,33622251-33622315,33623140-336232... 28 9.4
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 132 RPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDE-QAPVANEVEADQKVP 284
+P++ T+P+ ++ + + P AT+T++S S D +P+A ++ D VP
Sbjct: 179 KPQSEPTEPKKEKEQPKAPEPKATKTEESFLSEDRTFSSPIARKLAEDNNVP 230
>11_01_0619 - 4961588-4962409
Length = 273
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 153 QPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRESRA 308
+P+ K+ K+R R T SA S D ++ A++ ++D K RKK R+
Sbjct: 223 RPKRKQQKRRHR----RETSSSASSESDSESASASDSDSDDKGSRKKSRKRS 270
>07_01_0733 +
5570084-5570282,5570395-5570600,5572484-5572624,
5572773-5572949,5573049-5573145,5573575-5573687,
5573774-5573896,5574004-5574075,5575340-5575432,
5575564-5575674,5575767-5575889,5576834-5576890,
5576939-5577022,5577140-5577214,5577418-5577554,
5577719-5577853,5579029-5579168,5579334-5579399,
5579732-5579838,5579910-5579990,5580064-5580138,
5580224-5580325,5581837-5582005,5582090-5582217,
5582596-5582679,5582779-5582879,5583729-5583882,
5583964-5584038,5584112-5584262,5584463-5585078,
5585427-5585487,5585874-5586019,5586104-5586287,
5586363-5586440,5586603-5586931,5587023-5587199,
5587571-5587667,5587742-5587897,5587962-5588198,
5588271-5588354,5588426-5588486,5588762-5588898
Length = 1912
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 117 KKGRGRPKANGTQPESKELKKRGRPP--AATRTKDSAKSSDDEQAPVANEVEADQKVPRK 290
KKG+G K + +P+SK+ KK R A + ++ D A +A D PR
Sbjct: 8 KKGKGSGKPDQLRPKSKQFKKHSRKEEVAGEGEQQERPAAPDSAAVLAAAAADDGDFPRG 67
Query: 291 KRESRARVKV 320
R +R +V
Sbjct: 68 GRSLLSRDEV 77
>04_04_0923 +
29441740-29441980,29442321-29442401,29442630-29442719,
29443123-29443203,29443721-29443774,29444062-29444111,
29444542-29444623,29444734-29444838,29445514-29445641,
29445726-29445797,29445887-29445937,29446029-29446100,
29446201-29446278,29446446-29447270,29447648-29448556
Length = 972
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 93 DDGSTVVEKKGRGRP--KANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPV-ANEV 263
D GS E G+ K GT+ +SKEL+K+ + S K+ D Q P A E
Sbjct: 33 DQGSEKKEMSGKNIKSIKETGTKGQSKELQKKESKSRKSTKDKSKKNKDMTQVPTNAEEF 92
Query: 264 EADQKVPRKKRESR 305
+ ++ESR
Sbjct: 93 HKEYTTKVIRKESR 106
>11_06_0710 - 26492093-26493460
Length = 455
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/66 (22%), Positives = 35/66 (53%)
Frame = +3
Query: 114 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKK 293
+KK + +PK + ++ KK+ + ++ D AK +++ + E D + P+KK
Sbjct: 174 KKKSKKKPK---NPDDDEDDKKKSKKKSSDEDNDGAKKKKKKKSKGKSSDEEDDEKPKKK 230
Query: 294 RESRAR 311
+S+++
Sbjct: 231 SKSKSK 236
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 120 KGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRE 299
+GR R +A + P ++ ++ G P R K +A S + P +E E PR++R
Sbjct: 217 RGRRRKRAATSDPPPEDDEEEGTPAQPRRRKRAATS---DPPPEDDEEEGTPAPPRRRRR 273
Query: 300 SRA 308
+A
Sbjct: 274 RKA 276
>03_05_0226 -
22115285-22115404,22115477-22116661,22117037-22117861,
22118029-22118106,22118370-22118420,22118510-22118581,
22118666-22118667,22119453-22119557,22119668-22119749,
22120178-22120227,22120514-22120567,22121084-22121164,
22121567-22121656,22121884-22121964,22122304-22122544
Length = 1038
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 138 KANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRK--KRESR 305
K GT+ +SKEL+K+ + TKD +K + D AN E ++ K ++ESR
Sbjct: 50 KETGTKGQSKELQKK-ESKSRKSTKDKSKKNKDMTQVSANAEEFHKEYTTKVIRKESR 106
>07_03_1178 - 24580294-24580727,24581749-24582274
Length = 319
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 123 GRGRPKANGTQPESKELKK-RGRPPAATRTKDSAKSSDDEQAPVANEVEA--DQKVPRKK 293
G GRP ANG+ E L+ R T T D KS ++ V++ V+ +K+
Sbjct: 209 GGGRPPANGSMKEQPPLRTLRSLTMRTTSTGDLRKSMMEDMPMVSSRVDGPNGRKIDGFL 268
Query: 294 RESRARVKVEVV 329
+ R R +V +V
Sbjct: 269 YKYRKREEVRIV 280
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Frame = +3
Query: 126 RGRPKANGTQPESKELKKRGRPPAAT-----------RTKDSAKSSDDEQAPVANEVEAD 272
RGRP+A + KK G P+ R ++ + +++E+ A A+
Sbjct: 173 RGRPRAPAAAAAAAGTKKVGSGPSRVTLERLREGIERRAEEEERRAEEERRAEAERAAAE 232
Query: 273 QKVPRKKRESRARVKVE 323
++ R++ E RAR + E
Sbjct: 233 ERARREEEEGRARAEEE 249
>04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268
Length = 667
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 1 AINSHGNSGIACCKQVLAKYL-HYKLFSELCLTT 99
+IN G SGI CC+ + K + HYK++ + T
Sbjct: 69 SINGEGCSGIGCCQTAIPKGIKHYKVWFDTHFNT 102
>04_03_0550 + 17054155-17054182,17054438-17054503,17054504-17056959
Length = 849
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 506 KVYFHSTHTELSQRTITLRFLDPQVFIGLQILHLLHP 396
+VYF++ +L+ T+ L VFIGL +L L P
Sbjct: 14 RVYFYAFDIDLASSTLVTGMLSVHVFIGLLLLSLHAP 50
>01_05_0078 +
17931998-17932062,17933320-17933416,17933506-17933601,
17933957-17933988,17935143-17935595,17935831-17935975,
17936058-17936159,17937798-17937890,17939448-17939489,
17940092-17940202,17940446-17940517,17940596-17940714,
17940981-17941044,17941133-17942782
Length = 1046
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 115 KRKDAVDQKPMEHNLSRKNLKNEVGLQLPPEQKI 216
+++ ++D+ HN SRK ++V LPPE+++
Sbjct: 679 EKEHSMDESNSTHNRSRKRTPDQVDGSLPPEKQV 712
>09_04_0644 + 19181335-19184424
Length = 1029
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 129 GRPKANGTQPESKELKKRGRPPAATRTKD--SAKSSDDEQAPVANEVEADQKVPRKKRES 302
G P S+E ++ G PPA +D SA+ +D QA A V D K KK ++
Sbjct: 97 GMPIKASADKLSREAQQYGYPPAFPEVEDDSSAEVADSSQADNAASVVPD-KFKSKKSKA 155
Query: 303 RARVKVE 323
++V ++
Sbjct: 156 ASKVGMQ 162
>08_02_0550 +
18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +3
Query: 132 RPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRESRAR 311
RPKA + E +ELKK G+P + A++ + P N E D K + A
Sbjct: 278 RPKAKKWRKEEEELKKAGKPIPMEHHNERARNWVHARTPSFNS-EGDVVFKDPKLQQVAN 336
Query: 312 VKVEVV 329
E+V
Sbjct: 337 KMKEIV 342
>01_06_1259 - 35810926-35811777
Length = 283
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Frame = +3
Query: 96 DGSTVVEKKGRGR------PKANGTQPESKELKKRGRPPAATRTKDSAKSSD 233
+ S+ K+GR R P+ + T P + + K+RGRPP +A+S++
Sbjct: 189 NASSQPRKRGRPRKDATMYPRKDATIPANTQPKRRGRPPKNRNLSGNAQSAE 240
>09_04_0600 +
18883094-18883393,18883606-18883755,18883851-18884142,
18884697-18884858,18884958-18885021,18887573-18888080
Length = 491
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 512 SLMVSKLKYLVNSHVSSNLLNYRDSTTFSIEIISPKYSC 628
S M L+ V H S +L Y D+TT+ + + +P +C
Sbjct: 450 SRMRLALQLCVRRHTSWCMLLYSDTTTYGLNVTAPSGAC 488
>06_03_1069 -
27345207-27345488,27345746-27346078,27346252-27347041,
27347153-27347351,27347522-27347667,27347823-27348094,
27348161-27348262,27348351-27348470,27348576-27348729,
27348986-27349114,27349554-27349900
Length = 957
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -1
Query: 358 WRWCIFAWPSTTSTFT--LALDSRFFLGTFWSASTSLATG-ACSSSEDLAESFVLVAAGG 188
W+WC+ A+P + + +++ L + + + +LATG A + +A+ + V +G
Sbjct: 373 WKWCLTAFPEEYKSLVPKVLVETMSELNSSFVSRVNLATGDAVPETRSVAKGILDVLSGD 432
Query: 187 RPR 179
P+
Sbjct: 433 LPK 435
>06_01_0906 +
6990892-6991615,6992480-6992679,6992822-6993002,
6993855-6994046,6994492-6994724,6995537-6995638,
6995776-6995826,6996234-6996338,6997287-6997353,
6997946-6997962
Length = 623
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 144 NGTQ-PESKELKKRGR---PPAATRTKDSAKSSDDEQAPVANEVEA-DQKVPRKKRESRA 308
NGT P S + +KRGR PPAA S+ +P+A V A D P R
Sbjct: 42 NGTHDPASGQKRKRGRKPKPPAAAAAAASSDGHHHPSSPLAAAVSASDSPDPASSPAPRG 101
Query: 309 R 311
R
Sbjct: 102 R 102
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 147 GTQPESKELKKRGR-PPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRESRARVK 317
G P KE + + PPAA K+ ++++D +A A K +KK+E K
Sbjct: 336 GPTPAEKEKEVLPQAPPAAAMVKEDTETAEDGKAGEGEVESAAAKKKKKKKEKEKEKK 393
>05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241
Length = 1445
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +3
Query: 114 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKK 293
++KG +A G P + ++ G K +D+E+A E EA+ +
Sbjct: 103 KRKGAASAEAGGGGPSKRRVRSSGSAGGRGARKRKEAEADEEEAEAEAEEEAEAEAGTPA 162
Query: 294 RESRARVKVEVVDG 335
R ++V VDG
Sbjct: 163 RGE--SMEVSQVDG 174
>07_03_1632 +
28271559-28271645,28272641-28272713,28273030-28273361,
28273455-28274791,28275451-28275848,28275963-28277644,
28277727-28277884,28278645-28278802,28279110-28279270,
28279826-28280014
Length = 1524
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 115 KRKDAVDQKPME-HNLSRKNLKNEVGLQLPPEQKILLSLL 231
K+K AVD K + N +KNE+ ++ P QKI+L L
Sbjct: 224 KKKKAVDTKRSKSRNDVSAVMKNEIDIETPAGQKIVLEAL 263
>06_01_1104 + 9097108-9097779
Length = 223
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 126 RGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRESR 305
R RP A+ ++ G ++A ++D+ + PVA+EVE + R E R
Sbjct: 8 RRRPVADEAADVAERAGGGGMSGRGGAEWEAAGANDERRRPVADEVEVGAETRRGAVERR 67
Query: 306 ARVKVEVVD 332
V E D
Sbjct: 68 GLVADEAAD 76
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 141 ANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRESRARVKV 320
+ G++ K LK + A +R+ DSAKS+DD++ +E+EA + + R +V
Sbjct: 365 SKGSEDAEKTLKSSDQ--ADSRSVDSAKSTDDDEED-EDEIEAARMAAMNQEIKRVLTEV 421
>04_04_1284 +
32376870-32376874,32376876-32376935,32377166-32377301,
32377439-32377596,32377791-32377881,32377975-32378094,
32378166-32378234,32378354-32378445,32378578-32378680,
32378761-32378868,32378949-32379011,32379073-32379144,
32379322-32379399,32379478-32379540,32379617-32379680,
32379817-32379902,32380456-32380569,32380760-32380837,
32381068-32381303,32381486-32381576,32381706-32381894,
32382082-32382117
Length = 703
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 90 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDE-QAPVANEVE 266
+D T ++GRGR A+ Q + R AA R+++ SSD+E + ANEV
Sbjct: 569 TDVAKTGTSRRGRGRGTASMKQTTLNF--SQSRSSAAIRSEEVQSSSDEENETNEANEV- 625
Query: 267 ADQKVPRKKRESRAR 311
+ P + + R
Sbjct: 626 VESSEPEESPQQTGR 640
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 135 PKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRESRARV 314
P + + L ++G P++T +S ++Q PVA E + PRK+
Sbjct: 525 PTPRAGEQLNMRLVEKGPSPSSTEPGTDTESCTNKQGPVAAEENNKKCCPRKQASMALGT 584
Query: 315 KVE 323
++E
Sbjct: 585 EIE 587
>03_02_0917 +
12372122-12372422,12372487-12372524,12373103-12373186,
12373796-12374504,12374641-12374729,12374834-12374903,
12374977-12375060,12375097-12375239,12375337-12375418,
12375605-12375687,12375769-12375835,12376287-12376376,
12377631-12377737,12377862-12377969
Length = 684
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 244 ACSSSEDLAESFVLVAAGGRPRFL 173
AC S ED SF +GGRP+F+
Sbjct: 72 ACKSFEDFDISFKSTRSGGRPKFV 95
>03_02_0514 +
9038606-9039790,9040211-9040432,9040548-9040655,
9041608-9041802,9041905-9042153,9042525-9042672,
9042673-9042779,9043311-9043475,9044506-9045948
Length = 1273
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 539 LVNSHVSSNLLNYRDSTTFSIEIISP 616
+V S SSNLLN +D +F +E + P
Sbjct: 492 IVGSVTSSNLLNPQDDLSFKLEYVHP 517
>01_06_0235 - 27747908-27749023
Length = 371
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +3
Query: 114 EKKGRGRPKANGTQPESKELKKRGRPP-AATRTKDSAKSSDDEQAPVANEVEADQK---- 278
E+KG RP+ +P+ K ++G AAT D P N DQ
Sbjct: 168 EEKGVPRPRP---RPKKKRRTEKGSVVIAATAAADGELQKPQGTTPETNVEGEDQAPPRP 224
Query: 279 --VPRKKRESRARVKVEVVDG 335
VP+KK+ + V+V DG
Sbjct: 225 KPVPKKKKRRTEKGSVDVADG 245
>04_04_1441 -
33621423-33622118,33622251-33622315,33623140-33623227,
33623957-33625570
Length = 820
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 252 ANEVEADQKVPRKKRESRARVKVEVVD 332
A + + ++KV ++K+E + + KVEVVD
Sbjct: 346 AKDSKQEKKVKKEKKEKKKKKKVEVVD 372
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,990,239
Number of Sequences: 37544
Number of extensions: 323203
Number of successful extensions: 1185
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -