Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0079
(271 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 97 9e-20
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 87 1e-16
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 82 2e-15
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 1e-14
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 77 8e-14
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 76 1e-13
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 65 3e-10
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 65 3e-10
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 55 3e-07
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 49 2e-05
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 48 3e-05
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 46 2e-04
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 42 0.002
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 37 0.076
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 36 0.23
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 33 1.6
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 32 2.2
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 31 5.0
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 31 6.6
UniRef50_Q0BZ87 Cluster: YD repeat/RHS repeat protein; n=1; Hyph... 30 8.8
UniRef50_A1SCD2 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 96.7 bits (230), Expect = 9e-20
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWK Y
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGY 48
Score = 46.8 bits (106), Expect = 9e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +1
Query: 175 RVAGGNDKQGFPMKQGVLTNSRV 243
R+AGGNDKQGFPMKQGVLT+ R+
Sbjct: 51 RIAGGNDKQGFPMKQGVLTHGRL 73
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 86.6 bits (205), Expect = 1e-16
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWK Y
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGY 48
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKGHS 270
V ++AGGNDKQGFPMKQGVLTN+RV KGHS
Sbjct: 49 VFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHS 82
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK Y
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGY 48
Score = 55.6 bits (128), Expect = 2e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKGHS 270
V R++GGNDKQGFPMKQGVLT+ RV SKGHS
Sbjct: 49 VVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHS 82
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 161
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 77.0 bits (181), Expect = 8e-14
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWK Y
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGY 48
Score = 56.0 bits (129), Expect = 2e-07
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKGHS 270
V R+ GGNDKQGFPMKQG++TN RV SKGHS
Sbjct: 49 VFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHS 82
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWK Y
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGY 48
Score = 43.6 bits (98), Expect = 9e-04
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 175 RVAGGNDKQGFPMKQGVLTNSRV 243
R++GGNDKQGFPMKQ VLT+ R+
Sbjct: 51 RISGGNDKQGFPMKQDVLTHDRI 73
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 65.3 bits (152), Expect = 3e-10
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+K Y
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGY 48
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKGHS 270
V ++AGGNDK GFPMKQGV+ RV S+GHS
Sbjct: 49 VFKIAGGNDKDGFPMKQGVMVRGRVRLLLSEGHS 82
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 65.3 bits (152), Expect = 3e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+K Y
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGY 48
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKGH 267
V ++ GGNDKQGFPM+QGVL RV KGH
Sbjct: 49 VLKITGGNDKQGFPMRQGVLFKGRVRILMRKGH 81
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 55.2 bits (127), Expect = 3e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+K Y
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGY 47
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRV 243
+ ++ GG DK GFPM GV TN+RV
Sbjct: 48 ILKITGGCDKDGFPMMTGVATNNRV 72
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 48.8 bits (111), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKG 264
V R+ GGNDKQGFPM QGVLTN+RV KG
Sbjct: 90 VFRITGGNDKQGFPMMQGVLTNNRVRLLFKKG 121
Score = 48.0 bits (109), Expect = 4e-05
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ Y
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGY 89
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 48.4 bits (110), Expect = 3e-05
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEW 158
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEW 45
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 178 VAGGNDKQGFPMKQGVLTNSRVASSESKG 264
+ GG DKQGFPMK+G+L+ SRV KG
Sbjct: 52 ITGGQDKQGFPMKEGILSPSRVKILLKKG 80
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++K Y
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGY 48
Score = 39.9 bits (89), Expect = 0.011
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 175 RVAGGNDKQGFPMKQGVLTNSRV 243
R+ GG DKQGFPMKQGV+T R+
Sbjct: 51 RIGGGFDKQGFPMKQGVITPRRI 73
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKXY 167
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+K Y
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGY 49
Score = 37.5 bits (83), Expect = 0.058
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKG 264
+ R+ GG+DK GFPM GVL +SRV+ +G
Sbjct: 50 IFRLRGGSDKDGFPMVPGVLASSRVSLLVKRG 81
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 37.1 bits (82), Expect = 0.076
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1
Query: 175 RVAGGNDKQGFPMKQGVLTNSR 240
R+ GGND QGFPM QGVL + R
Sbjct: 57 RITGGNDAQGFPMYQGVLKSQR 78
Score = 33.9 bits (74), Expect = 0.71
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEW 158
K+N+S P TG K + D K + + RM +E + LG+E+
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEY 51
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKG 264
+ + GG+D QGFPM G LT RV SKG
Sbjct: 34 IMEITGGDDYQGFPMVSGHLTKKRVRPLLSKG 65
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 75 VVDEHKLRIFYEKRMGAEVEADQLGDEWKXYGXSCRWRQRQARI 206
VVDEH L FY+ R+GA+V + D+W R RQR R+
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQWWK-----RERQRNGRL 812
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL 146
M + ++YPA+ QKL ++ +H++ Y+ E+ AD L
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 175 RVAGGNDKQGFPMKQGVLTNSRVASSESKG 264
R+ GG+DK GFPMK+ V R S + G
Sbjct: 48 RITGGSDKNGFPMKEDVDGTRRFKSLVNGG 77
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEV 131
KLN+S+ Q L EV + KLR FYEK M E+
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEI 36
>UniRef50_Q0BZ87 Cluster: YD repeat/RHS repeat protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: YD repeat/RHS
repeat protein - Hyphomonas neptunium (strain ATCC
15444)
Length = 1493
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +2
Query: 2 FDGIDRSHEVKRFV-PGNGMPEVVRS 76
+DG+ R E++R PG+G+P++VRS
Sbjct: 472 YDGVGRVTEIRRISKPGSGLPDMVRS 497
>UniRef50_A1SCD2 Cluster: Putative uncharacterized protein; n=1;
Nocardioides sp. JS614|Rep: Putative uncharacterized
protein - Nocardioides sp. (strain BAA-499 / JS614)
Length = 617
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 5 DGIDRSHEVKRFVPGNGMPEVVRSGGRAQASXLL 106
DG +R+ ++ R V NG P+V R GG + + +L
Sbjct: 221 DGFERTGQLPRKVDTNGTPDVHRCGGLVKVAGML 254
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,217,655
Number of Sequences: 1657284
Number of extensions: 3980643
Number of successful extensions: 11889
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11888
length of database: 575,637,011
effective HSP length: 67
effective length of database: 464,598,983
effective search space used: 10221177626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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