Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0079
(271 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 1.0
AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-... 22 1.0
AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-... 22 1.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 3.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 3.1
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 3.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 3.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 3.1
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 20 5.4
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 19 7.2
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 19 9.5
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 19 9.5
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.2 bits (45), Expect = 1.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 79 TTSNNFWHPVAGYETFNFMTAVNP 8
+TSNN WH G + N NP
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNNP 393
>AY600516-1|AAT11864.1| 143|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 143
Score = 22.2 bits (45), Expect = 1.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI 101
M ++ P+TG Q + +VV HKL++
Sbjct: 54 MYIHPDSPSTGEQWMQKVVSFHKLKL 79
>AY600515-1|AAT11863.1| 134|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 134
Score = 22.2 bits (45), Expect = 1.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI 101
M ++ P+TG Q + +VV HKL++
Sbjct: 54 MYIHPDSPSTGEQWMQKVVSFHKLKL 79
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 3.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 220 PVSSGILACRCRQRHEXP*XFH 155
PVS +L C R+ P FH
Sbjct: 417 PVSISLLIAACGLRNGDPCFFH 438
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 3.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 220 PVSSGILACRCRQRHEXP*XFH 155
PVS +L C R+ P FH
Sbjct: 417 PVSISLLIAACGLRNGDPCFFH 438
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 20.6 bits (41), Expect = 3.1
Identities = 11/39 (28%), Positives = 14/39 (35%)
Frame = +2
Query: 2 FDGIDRSHEVKRFVPGNGMPEVVRSGGRAQASXLLRKAH 118
F R H + N P V R G++ A K H
Sbjct: 230 FSSPRRRHSINLLEEDNQKPNVCRICGKSYARPSTLKTH 268
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.6 bits (41), Expect = 3.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 220 PVSSGILACRCRQRHEXP*XFH 155
PVS +L C R+ P FH
Sbjct: 417 PVSISLLIAACGLRNGDPCFFH 438
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.6 bits (41), Expect = 3.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 220 PVSSGILACRCRQRHEXP*XFH 155
PVS +L C R+ P FH
Sbjct: 417 PVSISLLIAACGLRNGDPCFFH 438
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 19.8 bits (39), Expect = 5.4
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = +2
Query: 20 SHEVKRFVPG 49
+HE+K+ +PG
Sbjct: 769 NHEIKKVIPG 778
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 19.4 bits (38), Expect = 7.2
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -2
Query: 105 KRXEACARPPLRTTSGIPLPGT 40
K A A + T +GIP P T
Sbjct: 208 KASPAAAPRSVATPTGIPTPST 229
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 19.0 bits (37), Expect = 9.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 250 KTQHGCLSGPPVS 212
K HG L G P+S
Sbjct: 301 KWNHGLLQGDPLS 313
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 19.0 bits (37), Expect = 9.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -1
Query: 223 PPVSSGILACRCRQR 179
PP+ ++A RC +R
Sbjct: 753 PPLYKDLVAKRCEER 767
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,963
Number of Sequences: 336
Number of extensions: 909
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used: 4485306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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