Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0079
         (271 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical ...    73   4e-14
AC006804-1|AAF60755.1|  340|Caenorhabditis elegans Hypothetical ...    26   4.2  
U40483-1|AAA99775.1|  322|Caenorhabditis elegans NEX1 annexin pr...    25   7.3  
U00064-7|AAB52702.1|  322|Caenorhabditis elegans Annexin family ...    25   7.3  
AF067942-9|AAG45572.1|  347|Caenorhabditis elegans Hypothetical ...    25   7.3  
AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical ...    25   7.3  
Z83317-4|CAL49433.1|  194|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z74043-7|CAA98539.2|  705|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical
           protein Y71A12B.1 protein.
          Length = 246

 Score = 72.5 bits (170), Expect = 4e-14
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = +3

Query: 24  MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKXY 167
           M+LN +YPATG QK FEV +E KLR+F+EKRM  EV  D LGDEWK Y
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGY 48



 Score = 52.0 bits (119), Expect = 6e-08
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = +1

Query: 169 VXRVAGGNDKQGFPMKQGVLTNSRVASSESKGHS 270
           V R+ GGNDKQGFPMKQG+LTN RV     KG S
Sbjct: 49  VVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQS 82


>AC006804-1|AAF60755.1|  340|Caenorhabditis elegans Hypothetical
           protein Y53G8B.2 protein.
          Length = 340

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 57  CQKLFEVVDEHKLRIFYEK 113
           CQKL E+ DEHK +   EK
Sbjct: 315 CQKLTELFDEHKEKYGVEK 333


>U40483-1|AAA99775.1|  322|Caenorhabditis elegans NEX1 annexin
           protein.
          Length = 322

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 93  LRIFYEKRMGAEVEADQLGD 152
           +R+ YEK  G  +EAD  GD
Sbjct: 122 IRVTYEKEYGKALEADIAGD 141


>U00064-7|AAB52702.1|  322|Caenorhabditis elegans Annexin family
           protein 1 protein.
          Length = 322

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 93  LRIFYEKRMGAEVEADQLGD 152
           +R+ YEK  G  +EAD  GD
Sbjct: 122 IRVTYEKEYGKALEADIAGD 141


>AF067942-9|AAG45572.1|  347|Caenorhabditis elegans Hypothetical
           protein ZK6.2 protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 242 TRLFVRTPCFIGNPCLSLPPATR 174
           TR      CF+G  C   PP TR
Sbjct: 37  TRTMPIKKCFLGENCFERPPFTR 59


>AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical
           protein T21D12.11 protein.
          Length = 709

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 126 RRPCAFRKRXEACARPPLRTTSGIPLPGT 40
           RR C+ ++R     +PP  TT  +P   T
Sbjct: 325 RRRCSRKQRCHTTTQPPSPTTESLPTSTT 353


>Z83317-4|CAL49433.1|  194|Caenorhabditis elegans Hypothetical
           protein F13G11.3 protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 260 FDSEDATRLFVRTPCFI 210
           FD +D  R+ V  PCF+
Sbjct: 130 FDDDDCNRITVYLPCFV 146


>Z74043-7|CAA98539.2|  705|Caenorhabditis elegans Hypothetical
           protein T19B10.5 protein.
          Length = 705

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 81  PPLRTTSGIPLPGTKRLTS 25
           PP   TSGIP P    +TS
Sbjct: 639 PPTAHTSGIPTPSRSSITS 657


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,852,041
Number of Sequences: 27780
Number of extensions: 93497
Number of successful extensions: 263
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)