Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0077
(785 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 31 1.0
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 31 1.4
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 31 1.4
04_03_1012 - 21711945-21714002 30 1.8
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 30 2.4
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 29 3.2
05_06_0127 - 25845253-25845351,25845506-25845569,25845962-258461... 29 3.2
11_06_0610 - 25449085-25453284 29 4.2
11_02_0037 - 7613632-7613727,7614452-7615507 29 4.2
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 29 4.2
11_06_0690 + 26303733-26306540 29 5.5
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 29 5.5
04_04_1028 + 30230224-30231274,30231500-30231609,30232144-302321... 29 5.5
08_02_0885 + 22268287-22268988 28 7.3
05_04_0335 - 20354678-20354686,20354819-20355662,20355739-20356217 28 7.3
09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238 28 9.7
05_05_0367 - 24444268-24444393,24444524-24444635,24444721-244448... 28 9.7
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 28 9.7
02_03_0341 - 17948124-17948183,17948417-17948499,17948668-179487... 28 9.7
02_02_0264 + 8404879-8405106 28 9.7
01_06_1431 + 37317248-37317907 28 9.7
01_04_0063 - 15574855-15575143,15575398-15575602,15575746-155759... 28 9.7
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 369 TGASXRTLPSPAARCIPPPRLRTGLRGNI---AAQDPVIVHGHV-AFQTSVIHAVTGTDA 536
T A PSP PPP G+ G + A P +V G+V +F TS + +
Sbjct: 285 TAAGVVAAPSPVTSLAPPPATAVGVSGGVRAPAEPPPAVVMGNVMSFSTSNTEEYSDEED 344
Query: 537 AKDXHEACDLGRG 575
+ D D+G G
Sbjct: 345 SDDEGTE-DMGGG 356
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +1
Query: 355 ARSCPQVQAPEHSHHQLHDASLPPACEQVFGGISPLRTLSLFMDMSPFRQALFTPSP 525
A + P++ P S + +S P Q FGG +PLR L L P R A F P P
Sbjct: 113 AAAQPEMSWPRGSPPRCPSSSCPEPQRQEFGGGNPLRRLPLV--SPPPRPADFPPRP 167
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 356 PAAVHRCKXPNTPITSC-TMHPSPPPANRSSGEYR 457
P HRC P+ +C T P+PP SS E R
Sbjct: 328 PRLTHRCSTTTQPLPTCGTPAPAPPAGQPSSAEDR 362
>04_03_1012 - 21711945-21714002
Length = 685
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 564 LGRGMAALALTGLLPGRTSETYASSVLMQISRGTSGDSYEFKVPNKQDDII 716
LGR ALAL G +P +Y + V G GD+ F DD +
Sbjct: 94 LGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFV 144
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 374 CKXPNTPITSCTMHPSPPPA 433
CK PI+ CT P+PPPA
Sbjct: 104 CKVQAPPISQCTAVPTPPPA 123
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +2
Query: 407 TMHPSPPPANRSSGEYRRSGPCHCS---WT 487
T PPP NR +R S PC C+ WT
Sbjct: 127 TSDRQPPPMNRRMRHHRASAPCPCADVLWT 156
>05_06_0127 -
25845253-25845351,25845506-25845569,25845962-25846109,
25846224-25846486,25847065-25847209,25847300-25847639
Length = 352
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -1
Query: 602 KAGQGQSCHSSSQITSFVXIFSGVCAGDGVNNACLKGDMSMNNDRVLSGDIPPK 441
+A + SC S + + IFSG+ G GV + + + DR+L+GDIP K
Sbjct: 249 EAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDN---DGDRMLAGDIPWK 299
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 348 PSGPQLSTGASXRTLPSPAARCIPPPRLR 434
PS P+ S+ + ++LP PA +PPP ++
Sbjct: 1106 PSVPKASSPPTEKSLPPPATVSLPPPTVK 1134
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 280 PYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE-HSHHQLHDASLP 423
P+ + G + +G AY AR+ P P H HH H +P
Sbjct: 223 PHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPPPHGHHHHHQIIMP 271
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 324 GKRVR*R--VPSGPQLSTGASXRTLPSPAARCIPPPRLRTG-LRGNIA 458
G+R R R + PQ + G+ L + R PPPRLRT L G +A
Sbjct: 156 GRRSRPRRCLAGRPQATAGSPAARLAARRLRTSPPPRLRTSRLAGAVA 203
>11_06_0690 + 26303733-26306540
Length = 935
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = +3
Query: 357 PQLSTGASXRTLPSPAARCIPPPRLRTGLRGNIAAQDPVIVHGHVAFQTSVIHAVTGTDA 536
P L T + + S A PPP LR L G + P+IV+ + V+GT +
Sbjct: 707 PNLCTLDPEKEVESEAGIFEPPPALRAQLSGPVQCGSPLIVYERRRESLACHALVSGTPS 766
Query: 537 --AKDXHEACDLGRGMAALALTGLLPGRTSETYAS 635
A + + T PG TS T AS
Sbjct: 767 PLATLLARSAETSAASPVSWPTAGPPGVTSSTAAS 801
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +2
Query: 230 GFYLGKLRVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKXPNTPITSCT 409
GF +L F TT+L ++ + LR ++ T T NT S
Sbjct: 68 GFRFSRLLFFLLFSTTALYSSTSSSSSSAVLRATTTTTTTTTTTTT----TTNTFTLSFQ 123
Query: 410 MHPSPPPANRSS 445
+P+PPP+N S+
Sbjct: 124 ANPNPPPSNLSN 135
>04_04_1028 +
30230224-30231274,30231500-30231609,30232144-30232170,
30233107-30234252
Length = 777
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 531 DAAKDXHEACDLGRGMAALALTGLLPGRTSETYASSVLMQISR 659
DA + E+ LGRG + + G+LP T+ S+L S+
Sbjct: 442 DATDNYSESRILGRGGSGMVYKGILPNNTTVAIKKSILFDESQ 484
>08_02_0885 + 22268287-22268988
Length = 233
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 281 LTMTSGYLMERSALRKASSVTR--TVWPAAVHRCKXPNTPITSCTMHPSPPP 430
LTMT +M KA+ + T PA RC+ P+ +C M PP
Sbjct: 31 LTMTHNCVMYLKNKEKAAGSVKGKTAIPATPRRCRRPDGSNPACKMRWERPP 82
>05_04_0335 - 20354678-20354686,20354819-20355662,20355739-20356217
Length = 443
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 567 GRGMAALALTGLLPGRTSETYASSVLMQISRGTSGDSYEFKVPNKQDDI 713
GRG AL L +PGR + + + + G S + E V ++DDI
Sbjct: 91 GRGEEALQLFRSMPGRNLFAWTALISGLVKTGESVGAVELFVEMRRDDI 139
>09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238
Length = 472
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 379 APEHSHHQLHDAS-LPPACEQVFGGISP 459
A H HHQ+ A L P +Q FGG SP
Sbjct: 375 AEHHHHHQIPMAQPLVPNLQQQFGGSSP 402
>05_05_0367 -
24444268-24444393,24444524-24444635,24444721-24444821,
24445727-24445831,24445929-24446015,24446630-24446689,
24446834-24446881,24447571-24447816
Length = 294
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 427 ACEQVFGGISPLRTLSLFMDMSPFRQALFTPSPAQTP 537
+C+QV I L+ ++F+++ R A+ TP Q P
Sbjct: 84 SCDQVKAVIDYLKPQAVFLELCASRVAILTPQNLQVP 120
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 512 NNACLKGDMSMNNDRVLSGDIPPKTCSQAGGRDASCSW*WECSGA 378
N+ + D S DR++S I +A GRD W E SGA
Sbjct: 287 NHCNVYSDKSNEADRLVSAKISSHENKEASGRDIYDRWTSESSGA 331
>02_03_0341 -
17948124-17948183,17948417-17948499,17948668-17948761,
17948848-17948982,17949099-17949131,17949207-17949301,
17949394-17949439,17949517-17949597,17949874-17949927,
17950361-17950506,17952192-17952330
Length = 321
Score = 27.9 bits (59), Expect = 9.7
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Frame = +3
Query: 393 PSPAA----RCIPPPRLR------TGLRGNIAAQDPVIVHGHVAFQTSVIHAVTGTDAAK 542
P+PAA R + P R R +G+R ++AA + +V +A + + VTG A++
Sbjct: 22 PAPAASFPARSVRPDRRRAVSLSVSGVRTHVAAVEQAVVQDAIAQSEAPVVVVTG--ASR 79
Query: 543 DXHEACDLGRGMAALALTGLLPGRTSETYASSVLMQISRGTSGDSYEFK--VPNKQD 707
+A L G A + L+ S T A V +I G G + F+ V N+ D
Sbjct: 80 GIGKAIALAFGKAGCKV--LVNYARSSTDAEEVCKEI-EGFGGQAITFRGDVSNEAD 133
>02_02_0264 + 8404879-8405106
Length = 75
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 290 TSGYLMERSALRKASSVTRTVWPAAVHRCKXPNTPITSCTMHPSPPPANRSSGEYR 457
T+ + + + + T +V P A R P P +S + P+P P S EYR
Sbjct: 3 TNAHAFQTTTETARAQNTASVPPHAPSRTPYPPLPSSSSSSTPTPTPVLAVSREYR 58
>01_06_1431 + 37317248-37317907
Length = 219
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 342 RVPSGPQLSTGASXRTLPSPAARCIPPPRLRTGLRGNIAAQDPVI 476
R P P S+ ++ T SPAA PPRL + AA P I
Sbjct: 90 RSPFSPPPSSSSNSSTTASPAAAAAAPPRLIPTIPRPAAALAPHI 134
>01_04_0063 -
15574855-15575143,15575398-15575602,15575746-15575947,
15576038-15576613,15576623-15576786,15576826-15576928,
15577259-15577847,15578056-15578372
Length = 814
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 525 GTDAAKDXHEACDLGRGMAALAL---TGLLPGRTSETYASSVLMQISRGTSGDSYE 683
GT A D H C+L + +A+L TG +PG+ + + + + GTSG S E
Sbjct: 290 GTVKALDSHVMCELAQ-LASLVPANETGRIPGQPDSSIENVKAITMRGGTSGISKE 344
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,617,589
Number of Sequences: 37544
Number of extensions: 513600
Number of successful extensions: 2017
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2008
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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