Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0073
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 155 3e-38
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 155 3e-38
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 155 3e-38
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 155 3e-38
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 155 3e-38
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 147 8e-36
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 147 8e-36
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 127 7e-30
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 127 7e-30
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 125 4e-29
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 124 5e-29
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 124 5e-29
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 124 7e-29
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 111 7e-25
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 111 7e-25
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 69 3e-12
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 58 5e-09
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 58 5e-09
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 54 1e-07
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 54 1e-07
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 54 1e-07
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 54 1e-07
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 54 1e-07
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 53 2e-07
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 51 7e-07
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 51 7e-07
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 51 7e-07
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 51 7e-07
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 51 7e-07
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 51 1e-06
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 50 2e-06
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 49 4e-06
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 48 5e-06
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 48 5e-06
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 48 5e-06
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 48 5e-06
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 48 5e-06
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 48 5e-06
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 46 3e-05
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 46 4e-05
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 46 4e-05
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 46 4e-05
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 45 6e-05
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 45 6e-05
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 45 6e-05
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 45 6e-05
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 45 6e-05
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 45 6e-05
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 45 6e-05
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 45 6e-05
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 45 6e-05
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 43 2e-04
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 43 2e-04
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 43 3e-04
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 43 3e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 40 0.002
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 38 0.007
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 38 0.007
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 38 0.007
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 38 0.010
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 37 0.013
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 35 0.068
U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical pr... 35 0.068
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 33 0.16
Z77659-7|CAB01166.2| 137|Caenorhabditis elegans Hypothetical pr... 32 0.37
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 32 0.37
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49907-5|CAA90087.1| 327|Caenorhabditis elegans Hypothetical pr... 30 1.5
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 30 1.9
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 29 2.6
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.6
AC024785-2|AAF60599.2| 467|Caenorhabditis elegans C-type lectin... 28 5.9
Z69662-3|CAA93502.1| 449|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 28 7.9
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 155 bits (376), Expect = 3e-38
Identities = 65/86 (75%), Positives = 79/86 (91%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYPQTDVFL+CF+L NPASFENVRAKWYPEV HHCP+TPIILVGTK DLRE
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLRE 121
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSR 512
D+DT+E+L++++L P++ TQG M++
Sbjct: 122 DRDTVERLRERRLQPVSQTQGYVMAK 147
Score = 125 bits (301), Expect = 4e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PINLGLWDTAGQ+
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +2
Query: 494 GFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
G+ KEI AVKYLECSALTQ+GLK VFDEAIRAV+ P Q
Sbjct: 142 GYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTPPQ 181
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 155 bits (376), Expect = 3e-38
Identities = 65/86 (75%), Positives = 79/86 (91%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYPQTDVFL+CF+L NPASFENVRAKWYPEV HHCP+TPIILVGTK DLRE
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLRE 121
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSR 512
D+DT+E+L++++L P++ TQG M++
Sbjct: 122 DRDTVERLRERRLQPVSQTQGYVMAK 147
Score = 125 bits (301), Expect = 4e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PINLGLWDTAGQ+
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +2
Query: 494 GFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
G+ KEI AVKYLECSALTQ+GLK VFDEAIRAV+ P Q
Sbjct: 142 GYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTPPQ 181
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 155 bits (376), Expect = 3e-38
Identities = 65/86 (75%), Positives = 79/86 (91%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYPQTDVFL+CF+L NPASFENVRAKWYPEV HHCP+TPIILVGTK DLRE
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLRE 121
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSR 512
D+DT+E+L++++L P++ TQG M++
Sbjct: 122 DRDTVERLRERRLQPVSQTQGYVMAK 147
Score = 125 bits (301), Expect = 4e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PINLGLWDTAGQ+
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +2
Query: 494 GFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
G+ KEI AVKYLECSALTQ+GLK VFDEAIRAV+ P Q
Sbjct: 142 GYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTPPQ 181
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 155 bits (376), Expect = 3e-38
Identities = 65/86 (75%), Positives = 79/86 (91%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYPQTDVFL+CF+L NPASFENVRAKWYPEV HHCP+TPIILVGTK DLRE
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLRE 121
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSR 512
D+DT+E+L++++L P++ TQG M++
Sbjct: 122 DRDTVERLRERRLQPVSQTQGYVMAK 147
Score = 125 bits (301), Expect = 4e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PINLGLWDTAGQ+
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +2
Query: 494 GFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
G+ KEI AVKYLECSALTQ+GLK VFDEAIRAVL P Q
Sbjct: 142 GYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTPPQ 181
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 155 bits (376), Expect = 3e-38
Identities = 65/86 (75%), Positives = 79/86 (91%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYPQTDVFL+CF+L NPASFENVRAKWYPEV HHCP+TPIILVGTK DLRE
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLRE 121
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSR 512
D+DT+E+L++++L P++ TQG M++
Sbjct: 122 DRDTVERLRERRLQPVSQTQGYVMAK 147
Score = 125 bits (301), Expect = 4e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PINLGLWDTAGQ+
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +2
Query: 494 GFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
G+ KEI AVKYLECSALTQ+GLK VFDEAIRAVL P Q
Sbjct: 142 GYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTPPQ 181
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 147 bits (356), Expect = 8e-36
Identities = 61/86 (70%), Positives = 78/86 (90%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
+DYD+ R LS+PQTDVFL+CF+L NPASFENVRAKWYPEV HHCP+TPIILVGTK DLRE
Sbjct: 62 DDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLRE 121
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSR 512
D+DTIE+L++++L P+++TQG M++
Sbjct: 122 DRDTIERLRERRLQPVSHTQGYVMAK 147
Score = 113 bits (272), Expect = 1e-25
Identities = 50/56 (89%), Positives = 52/56 (92%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQ 255
CVVVGDGAVGKTCLL+SYTTNAFPGEYI TVFD YS NVMVDG+PINL LWDTAGQ
Sbjct: 6 CVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQ 61
Score = 58.0 bits (134), Expect = 6e-09
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = +2
Query: 494 GFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQPIQ 622
G+ KEI AVKYLECSALTQ GLK VFDEAIR L P Q Q
Sbjct: 142 GYVMAKEIKAVKYLECSALTQIGLKQVFDEAIRTGLTPPQTPQ 184
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 147 bits (356), Expect = 8e-36
Identities = 61/86 (70%), Positives = 78/86 (90%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
+DYD+ R LS+PQTDVFL+CF+L NPASFENVRAKWYPEV HHCP+TPIILVGTK DLRE
Sbjct: 62 DDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLRE 121
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSR 512
D+DTIE+L++++L P+++TQG M++
Sbjct: 122 DRDTIERLRERRLQPVSHTQGYVMAK 147
Score = 113 bits (272), Expect = 1e-25
Identities = 50/56 (89%), Positives = 52/56 (92%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQ 255
CVVVGDGAVGKTCLL+SYTTNAFPGEYI TVFD YS NVMVDG+PINL LWDTAGQ
Sbjct: 6 CVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQ 61
Score = 58.0 bits (134), Expect = 6e-09
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = +2
Query: 494 GFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQPIQ 622
G+ KEI AVKYLECSALTQ GLK VFDEAIR L P Q Q
Sbjct: 142 GYVMAKEIKAVKYLECSALTQIGLKQVFDEAIRTGLTPPQTPQ 184
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 127 bits (307), Expect = 7e-30
Identities = 52/87 (59%), Positives = 72/87 (82%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYPQTDVF++CFS+V+P SF+NV +KW PE+R HCP P+ILVGTKLDLR+
Sbjct: 66 EDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDLRD 125
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSRR 515
+ + + L+ + +PI+ TQG+ M+++
Sbjct: 126 EAEPMRALQAEGKSPISKTQGMKMAQK 152
Score = 102 bits (244), Expect = 3e-22
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDG VGKTC+LISYTT++FP +Y+PTVFDNYSA + +DG +NLGLWDTAGQ+
Sbjct: 10 CVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQE 66
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2
Query: 458 QGQETSPDHLHAGFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCP 607
Q + SP G ++I AVKYLECSALTQ+GL VF++A+R++L P
Sbjct: 134 QAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHP 183
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 127 bits (307), Expect = 7e-30
Identities = 52/87 (59%), Positives = 72/87 (82%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYPQTDVF++CFS+V+P SF+NV +KW PE+R HCP P+ILVGTKLDLR+
Sbjct: 66 EDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDLRD 125
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSRR 515
+ + + L+ + +PI+ TQG+ M+++
Sbjct: 126 EAEPMRALQAEGKSPISKTQGMKMAQK 152
Score = 102 bits (244), Expect = 3e-22
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDG VGKTC+LISYTT++FP +Y+PTVFDNYSA + +DG +NLGLWDTAGQ+
Sbjct: 10 CVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQE 66
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2
Query: 458 QGQETSPDHLHAGFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCP 607
Q + SP G ++I AVKYLECSALTQ+GL VF++A+R++L P
Sbjct: 134 QAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHP 183
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 125 bits (301), Expect = 4e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PINLGLWDTAGQ+
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +2
Query: 494 GFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
G+ KEI AVKYLECSALTQ+GLK VFDEAIRAVL P Q
Sbjct: 80 GYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTPPQ 119
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 124 bits (300), Expect = 5e-29
Identities = 55/90 (61%), Positives = 66/90 (73%)
Frame = +3
Query: 228 LGPLGYSRTEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIIL 407
LG + EDYDRLRPLSYPQTDVFL+CFS+V PASFENVR KW PE+ HHC TP +L
Sbjct: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLL 112
Query: 408 VGTKLDLREDKDTIEKLKDKKLAPITYTQG 497
VGT++DLR+D +EKL K P++ G
Sbjct: 113 VGTQVDLRDDPGMLEKLAKNKQKPVSTDVG 142
Score = 103 bits (246), Expect = 2e-22
Identities = 44/57 (77%), Positives = 50/57 (87%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQ+
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +2
Query: 509 KEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
KE+ AVKY+ECSALTQKGLK VFDEAI A L P Q
Sbjct: 147 KELKAVKYVECSALTQKGLKNVFDEAILAALDPPQ 181
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 124 bits (300), Expect = 5e-29
Identities = 55/90 (61%), Positives = 66/90 (73%)
Frame = +3
Query: 228 LGPLGYSRTEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIIL 407
LG + EDYDRLRPLSYPQTDVFL+CFS+V PASFENVR KW PE+ HHC TP +L
Sbjct: 50 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLL 109
Query: 408 VGTKLDLREDKDTIEKLKDKKLAPITYTQG 497
VGT++DLR+D +EKL K P++ G
Sbjct: 110 VGTQVDLRDDPGMLEKLAKNKQKPVSTDVG 139
Score = 103 bits (246), Expect = 2e-22
Identities = 44/57 (77%), Positives = 50/57 (87%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQ+
Sbjct: 3 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 59
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +2
Query: 509 KEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
KE+ AVKY+ECSALTQKGLK VFDEAI A L P Q
Sbjct: 144 KELKAVKYVECSALTQKGLKNVFDEAILAALDPPQ 178
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 124 bits (299), Expect = 7e-29
Identities = 54/86 (62%), Positives = 65/86 (75%)
Frame = +3
Query: 228 LGPLGYSRTEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIIL 407
LG + EDYDRLRPLSYPQTDVFL+CFS+V PASFENVR KW PE+ HHC TP +L
Sbjct: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLL 112
Query: 408 VGTKLDLREDKDTIEKLKDKKLAPIT 485
VGT++DLR+D +EKL K P++
Sbjct: 113 VGTQVDLRDDPGMLEKLAKNKQKPVS 138
Score = 101 bits (242), Expect = 5e-22
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
CVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ M+ G+P LGL+DTAGQ+
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAMIGGEPYTLGLFDTAGQE 62
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = +2
Query: 452 KAQGQETSPDHLHAGFGHVKEINAVKYLECSALTQKGLKTVFDEAIRAVLCPVQ 613
K + P + G KE+ AVKY+ECSALT+K LK VFDEAI A L P Q
Sbjct: 128 KLAKNKQKPVSTYVGEKLAKELKAVKYVECSALTEKELKNVFDEAILAALDPPQ 181
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 111 bits (266), Expect = 7e-25
Identities = 49/87 (56%), Positives = 60/87 (68%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYP TDV L+CFS+ +P S EN+ KW PEVRH CP+ PIILVG K DLR
Sbjct: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRS 123
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSRR 515
D T+ +L K P+ QG ++ +
Sbjct: 124 DPQTVRELAKMKQEPVKPEQGRAIAEQ 150
Score = 84.6 bits (200), Expect = 6e-17
Identities = 35/56 (62%), Positives = 45/56 (80%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK + L LWDTAGQ+
Sbjct: 9 VIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64
Score = 35.9 bits (79), Expect = 0.030
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 509 KEINAVKYLECSALTQKGLKTVFDEAIRAVL 601
++I A YLECSA T+ G++ VF++A +A L
Sbjct: 149 EQIGAFAYLECSAKTKDGIREVFEKATQAAL 179
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 111 bits (266), Expect = 7e-25
Identities = 49/87 (56%), Positives = 60/87 (68%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
EDYDRLRPLSYP TDV L+CFS+ +P S EN+ KW PEVRH CP+ PIILVG K DLR
Sbjct: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRS 123
Query: 435 DKDTIEKLKDKKLAPITYTQGLGMSRR 515
D T+ +L K P+ QG ++ +
Sbjct: 124 DPQTVRELAKMKQEPVKPEQGRAIAEQ 150
Score = 84.6 bits (200), Expect = 6e-17
Identities = 35/56 (62%), Positives = 45/56 (80%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK + L LWDTAGQ+
Sbjct: 9 VIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64
Score = 35.9 bits (79), Expect = 0.030
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 509 KEINAVKYLECSALTQKGLKTVFDEAIRAVL 601
++I A YLECSA T+ G++ VF++A +A L
Sbjct: 149 EQIGAFAYLECSAKTKDGIREVFEKATQAAL 179
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 81.4 bits (192), Expect = 6e-16
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = +1
Query: 88 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQKT 261
C+ VG+ AVGKT +++SYTTN +P Y+PT FDN+S V+VD KPI L L DTAGQ +
Sbjct: 12 CIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNFSVVVLVDKKPIRLQLHDTAGQSS 69
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +3
Query: 261 YDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRED- 437
+D LRPL Y DVF+I +S+V+ SFE+V WYPEV P T +ILVGT+ D R
Sbjct: 70 FDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTKRNPGTKLILVGTQADQRWQV 129
Query: 438 -KDTIEKLKDKKLA 476
+T+ +L+ K LA
Sbjct: 130 RGNTVTQLRGKALA 143
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 527 KYLECSALTQKGLKTVFDEAIRAVL 601
++ ECSALTQ LK +FD AI A L
Sbjct: 149 EFFECSALTQHNLKQMFDAAILAGL 173
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 DYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHC-PSTPIILVGTKLDLRE 434
+Y+++R LSYP +VFL+CFS+++ + E+ R+ W PE+R + + PI+LVGTK DL +
Sbjct: 64 NYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDLVD 123
Query: 435 DKDT 446
D D+
Sbjct: 124 DADS 127
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQ 255
VVVGD GKT LL++YT F Y TVFDN++ +V +D K + L+DTAGQ
Sbjct: 8 VVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAGQ 62
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 512 EINAVKYLECSALTQKGLKTVFDEAIRAVL 601
EI K+ CSALT KGLK VFDE+ A +
Sbjct: 142 EIGCHKFYSCSALTHKGLKRVFDESFLAAV 171
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
VVVGDG VGK+ L I N F EY PT+ D+Y V++DG+ L + DTAGQ+
Sbjct: 7 VVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQE 62
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRH--HCPSTPIILVGTKLDL 428
E+Y +R + FL+ F++ SFENV A + ++R P++LVG K DL
Sbjct: 62 EEYSAMRDQYMRTGEGFLLVFAVNEAKSFENV-ANYREQIRRVKDSDDVPMVLVGNKCDL 120
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
VVVGDG VGK+ L I N F EY PT+ D+Y V++DG+ L + DTAGQ+
Sbjct: 10 VVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQE 65
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRH--HCPSTPIILVGTKLDL 428
E+Y +R + FL+ F++ SFENV A + ++R P++LVG K DL
Sbjct: 65 EEYSAMRDQYMRTGEGFLLVFAVNEAKSFENV-ANYREQIRRVKDSDDVPMVLVGNKCDL 123
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSAN-VMVDGKPINLGLWDTAGQKT 261
+++GD VGK+CLL+ +T F + T+ + A V +DGK I L +WDTAGQ++
Sbjct: 10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQES 67
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQK 258
+++GD VGKTC+L ++ ++F +I T+ D + +DGK I L +WDTAGQ+
Sbjct: 12 LLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQK 258
+++GD VGKTC+L ++ ++F +I T+ D + +DGK I L +WDTAGQ+
Sbjct: 12 LLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQK 258
+++GD VGKTC+L ++ ++F +I T+ D + +DGK I L +WDTAGQ+
Sbjct: 12 LLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSAN-VMVDGKPINLGLWDTAGQK 258
+++GD VGK+CLL+ +T F + T+ + A V +DGK I L +WDTAGQ+
Sbjct: 10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQK 258
+++GD VGK+CLL+ + + + YI T+ D + +DGK I L +WDTAGQ+
Sbjct: 15 LLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 306 LICFSLVNPASFENVRAKWYPEV-RHHCPSTPIILVGTKLDL 428
++ + + + +F NV+ +W E+ R+ C + +LVG K DL
Sbjct: 88 IVVYDITDQETFNNVK-QWLQEIDRYACENVNKLLVGNKCDL 128
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAG 252
VV+G G VGK+ L + + ++ F +Y PT+ D Y + VDG+P L + DTAG
Sbjct: 7 VVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVLEILDTAG 60
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 252 TEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVR-HHCPSTPIILVGTKLDL 428
TE + +R L F++ +S+ + +F ++R VR + PI+LVG K DL
Sbjct: 61 TEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDL 120
Query: 429 REDK 440
+
Sbjct: 121 SHQR 124
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQK 258
+++GD VGKTC+L ++ +AF +I T+ D + + GK I L +WDTAGQ+
Sbjct: 13 LLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQK 258
+++GD VGKTC+L ++ +AF +I T+ D + + GK I L +WDTAGQ+
Sbjct: 13 LLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQK 258
+++GD VGK+ LL+ + N F YI T+ ++ M ++G+ + L +WDTAGQ+
Sbjct: 14 LIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQE 70
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 252 TEDYDRLRPLS---YPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKL 422
T +R R ++ Y T ++ + + N SF NV+ +W E+ ++C S +LVG K
Sbjct: 66 TAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVK-RWLQEIENNCDSVQKVLVGNKC 124
Query: 423 DLREDKDTIE 452
+ E + +E
Sbjct: 125 EENERRVVLE 134
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
++VG G VGK+ L + + + F EY PT D+Y V++DG+ ++ + DTAGQ+
Sbjct: 21 IMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTAGQE 76
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFE--NVRAKWYPEVRHHCPSTPIILVGTKLDL 428
EDY +R Y + F+ FS+++ SFE N + V++ S PI+LVG K D+
Sbjct: 76 EDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDM 135
Query: 429 REDK 440
R+ +
Sbjct: 136 RDQR 139
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAG 252
+++GD VGK+CLL+ + + + YI T+ D + +DGK I L +WDTAG
Sbjct: 15 LLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAG 252
VV+G G VGK+ L + + F +Y PT+ D+Y V VDG+ L + DTAG
Sbjct: 7 VVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 252 TEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVR-HHCPSTPIILVGTKLDL 428
TE + +R L F++ +S+ ++F ++ +R P+ILVG K DL
Sbjct: 61 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDL 120
Query: 429 REDKDTIEKLKDKKLA 476
ED+ + K + + LA
Sbjct: 121 -EDERVVGKDQGQNLA 135
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
VV+GDG VGK+ L I + F Y PT+ D Y + +DG + + + DTAGQ+
Sbjct: 21 VVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQE 76
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
VV+GDG VGK+ L I + F Y PT+ D Y + +DG + + + DTAGQ+
Sbjct: 21 VVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQE 76
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQK 258
+++GD VGKT L+ Y F +Y T+ D + +V +D + + L +WDTAGQ+
Sbjct: 13 IILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQE 69
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV--DGKPINLGLWDTAGQKTT 264
VVVG+ GKT LL + N F + + T+ ++ ++ DG+ I L LWDTAGQ+
Sbjct: 10 VVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQERF 69
Query: 265 IDSAPSLTHRRTSSLYVFRWSTQ 333
AP+ +L V S +
Sbjct: 70 RQLAPAYIRSARVALLVIDLSDE 92
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
VVVG G VGK+ L I + F +Y PT+ D+Y+ VD L + DTAGQ+
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQE 76
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVR-HHCPSTPIILVGTKLDLR 431
E++ +R FLI F++ + SFE V+ R PIILVG K DL
Sbjct: 76 EEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLE 135
Query: 432 EDK 440
++
Sbjct: 136 NER 138
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
VVVG G VGK+ L I + F +Y PT+ D+Y+ VD L + DTAGQ+
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQE 76
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVR-HHCPSTPIILVGTKLDLR 431
E++ +R FLI F++ + SFE V+ R PIILVG K DL
Sbjct: 76 EEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLE 135
Query: 432 EDK 440
++
Sbjct: 136 NER 138
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
VVVG G VGK+ L I + F +Y PT+ D+Y+ VD L + DTAGQ+
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQE 76
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVR-HHCPSTPIILVGTKLDLR 431
E++ +R FLI F++ + SFE V+ R PIILVG K DL
Sbjct: 76 EEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLE 135
Query: 432 EDK 440
++
Sbjct: 136 NER 138
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
VVVG G VGK+ L I + F +Y PT+ D+Y+ VD L + DTAGQ+
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQE 76
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVR-HHCPSTPIILVGTKLDLR 431
E++ +R FLI F++ + SFE V+ R PIILVG K DL
Sbjct: 76 EEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLE 135
Query: 432 EDK 440
++
Sbjct: 136 NER 138
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAF-PGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQK 258
+++GD GKTCLLI Y AF +I TV +Y ++ G K + L +WDTAGQ+
Sbjct: 6 MLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQE 63
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAF-PGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQK 258
+++GD GKTCLLI Y AF +I TV +Y ++ G K + L +WDTAGQ+
Sbjct: 6 MLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQE 63
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQK 258
+++GD VGK+CLL +T F + T+ + ++ V G+ I L +WDTAGQ+
Sbjct: 15 IIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 71
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAF-PGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQKTTI 267
V+VG+ VGKTCL+ +T F PG+ D V V I L +WDTAGQ+
Sbjct: 11 VLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFR 70
Query: 268 DSAPSLTHRRTSSLYVFRWSTQP 336
S + + V+ S QP
Sbjct: 71 SITQSYYRSAHAIVLVYDVSCQP 93
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQKTTI 267
+++G+ VGK+ L++ + + F E T+ ++ M +DG + L +WDTAGQ+
Sbjct: 15 LIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFR 74
Query: 268 DSAPS 282
PS
Sbjct: 75 TLTPS 79
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQK 258
V++GD VGK+ LL +T N F E T+ ++ ++ V+GK + +WDTAGQ+
Sbjct: 15 VLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQE 71
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQKTTI 267
V +G+ +VGKT L+ + ++F Y T+ D S + ++ + + L LWDTAGQ+
Sbjct: 14 VFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR 73
Query: 268 DSAPSLTHRRTSSLYVF 318
PS T ++ V+
Sbjct: 74 SLIPSYIRDSTVAVVVY 90
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQK 258
V++GD VGK+ LL +T N F E T+ ++ ++ V+GK + +WDTAGQ+
Sbjct: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQE 71
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQK 258
+++G+ +VGKT L Y ++F ++ TV ++ + G K + L +WDTAGQ+
Sbjct: 26 LIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQK 258
+++G+ +VGKT L Y ++F ++ TV ++ + G K + L +WDTAGQ+
Sbjct: 26 LIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV-DGKPINLGLWDTAGQ 255
V+VGD VGKTC++ + F T+ +++ +V DGK + L +WDTAG+
Sbjct: 14 VLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTAGE 69
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAG 252
+++GD VGK+CLL +T F + T+ + ++ V G+ I L +WDTAG
Sbjct: 15 IIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDT 246
+++GD VGK+ LL+ + N F YI T+ ++ M ++G+ + L +WDT
Sbjct: 14 LIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGK-PINLGLWDTAGQK 258
VVVGD GK+C+L+ + N+F ++I T+ ++ + G+ I L LWDTAG +
Sbjct: 10 VVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGME 66
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +3
Query: 252 TEDYDRLRPL--SYPQTDVFLIC-FSLVNPASFENVRAKWYPEVRHHCPSTPII-LVGTK 419
T +R R + SY + ++C + + N SFEN+ W E++ H P ++ LVG K
Sbjct: 62 TAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNK 121
Query: 420 LDLREDK----DTIEKLKDK 467
D+ +++ D EKL +
Sbjct: 122 ADMDQERKVDFDRAEKLASR 141
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQK 258
+++G+ +VGKT L Y ++F ++ TV ++ + G K + L +WDTAGQ+
Sbjct: 26 LIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQK 258
+++G+ +VGKT L Y ++F ++ TV ++ + G K + L +WDTAGQ+
Sbjct: 40 LIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 96
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV-DGKPINLGLWDTAGQK 258
V+VGD VGKTC++ + F T+ +++ +V DGK + L +WDT GQ+
Sbjct: 14 VLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQE 70
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQK 258
+++G+ +VGKT L Y ++F ++ TV ++ + G K + L +WDTAGQ+
Sbjct: 26 LIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQKTTI 267
V++G+ VGK+ LL +T N F + PT+ ++ ++ V+GK + + +WDTAG +
Sbjct: 12 VLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFR 71
Query: 268 DSAPSLTHRRTSSLYVF 318
A S +L V+
Sbjct: 72 CGASSYYRGALGALLVY 88
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQKTTI 267
++VG+ AVGKTCL + FP T+ D + +++ + + + LWDTAGQ+
Sbjct: 104 IIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYR 163
Query: 268 DSAPSLTHRRTSSL 309
S + +R +++
Sbjct: 164 QSIVAHYYRNVNAV 177
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQKTTI 267
V +G+ +VGKT ++ + ++F Y T+ D S + ++ + I L LWDTAGQ+
Sbjct: 15 VFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFR 74
Query: 268 DSAPSLTHRRTSSLYVF 318
PS + ++ V+
Sbjct: 75 SLIPSYIRDSSVAVVVY 91
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHH--CPSTPIILVGTKLDL 428
E + L P + V ++ + + N SF KW +VR+ C I+LVG K DL
Sbjct: 71 ERFRSLIPSYIRDSSVAVVVYDITNANSFHQT-TKWVDDVRNERGC-DVIIVLVGNKTDL 128
Query: 429 REDKDTIEKLKDKK 470
+ + + +KK
Sbjct: 129 ADKRQVSTEDGEKK 142
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQKTTI 267
V+ GD AVGK+ ++ F + T+ D + V VDG+ + L LWDTAGQ+
Sbjct: 465 VMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFR 524
Query: 268 DSAPSLTHRRTSSLYVF 318
S R ++ V+
Sbjct: 525 SLCKSYFRRADGAILVY 541
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +3
Query: 252 TEDYDRLRPLS---YPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCP-STPIILVGTK 419
T +R R L + + D ++ + + SF VR W ++ S PIILVG K
Sbjct: 517 TAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVR-DWIETIKESTERSIPIILVGNK 575
Query: 420 LDLR 431
+D+R
Sbjct: 576 VDMR 579
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM--VDGKPINLGLWDTAGQK 258
V VGD AVGKTC L + N F + T+ +++ M + I + LWDTAGQ+
Sbjct: 206 VFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQE 263
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV----------DGKPINLGLW 240
+ +GD VGKT L YT N F G++I TV ++ +V G+ + L LW
Sbjct: 11 LALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLW 70
Query: 241 DTAGQK 258
DTAGQ+
Sbjct: 71 DTAGQE 76
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV----------DGKPINLGLW 240
+ +GD VGKT L YT N F G++I TV ++ +V G+ + L LW
Sbjct: 11 LALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLW 70
Query: 241 DTAGQK 258
DTAGQ+
Sbjct: 71 DTAGQE 76
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/79 (34%), Positives = 40/79 (50%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQKTTID 270
VV+G+G VGK+ L + Y F Y T+ D+Y VD + L + DTAG T
Sbjct: 7 VVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAG--TEQF 64
Query: 271 SAPSLTHRRTSSLYVFRWS 327
+ T+ RT+ +V +S
Sbjct: 65 TGMRETYYRTAQGFVLVFS 83
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 252 TEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLR 431
TE + +R Y F++ FSL ++FEN++ + + P+ILVG K DL
Sbjct: 61 TEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLA 120
Query: 432 EDKDTIE 452
E + E
Sbjct: 121 ETRQVDE 127
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQK 258
V++G+G VGK+ L++ + N F +++ T+ ++ + V V+ +L +WDTAGQ+
Sbjct: 16 VLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQE 72
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTP-IILVGTKLDLR 431
E Y L P+ Y ++ L+ F + + SFE V+ W E++ +T I++VG K+DL
Sbjct: 72 EKYHALGPIYYRGSNGVLLVFDITDRKSFEKVK-NWVLEIKTCLGNTAEILIVGNKIDLE 130
Query: 432 EDK 440
E++
Sbjct: 131 EER 133
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +1
Query: 94 VVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQK 258
V+G VGK+ L++ +T N FP Y T+ D +S ++ + +L + DTAGQ+
Sbjct: 18 VMGYPHVGKSALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVTDTAGQQ 72
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPINLGLWDTAGQK 258
V++GDG VGK+ LL+ +T F + T+ + ++ +D + L +WDT GQ+
Sbjct: 10 VIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQE 66
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPINLGLWDTAGQK 258
V++GD VGK+ LL+ + F + T+ + N+ +D K + L +WDT GQ+
Sbjct: 10 VIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQE 66
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 94 VVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQKT 261
+VG GK+ + + Y T F GEY T+ DNY V G+ + + + DT T
Sbjct: 14 LVGMAGSGKSAIAVKYITKRFIGEYDSTLEDNYCRQETVGGQSLMVWMMDTVENAT 69
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP---INLGLWDTAGQK 258
+V+GD VGK+ LL +T PTV ++ A M++ +P + L LWDTAGQ+
Sbjct: 21 IVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYAR-MIELRPGYRVKLQLWDTAGQE 78
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGK-PINLGLWDTAGQK 258
V+VGDG GKT + + T F +Y+ T+ V + I +WDTAGQ+
Sbjct: 13 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQE 69
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
E + LR Y Q +I F + +++NV W+ ++ C + PI+L G K+D+++
Sbjct: 69 EKFGGLRDGYYIQGQCAIIMFDVTARVTYKNV-PNWHRDLARVCENIPIVLCGNKVDVKD 127
Query: 435 DK 440
K
Sbjct: 128 RK 129
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VD-GKPINLGLWDTAGQ 255
+V+GD VGKT ++ + N F Y T+ +++ ++ VD ++L +WD +GQ
Sbjct: 15 LVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
Frame = +1
Query: 100 GDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV----------DGKPINLGLWDTA 249
GD VGKT L YT N F G++I TV ++ +V G+ + L +WDTA
Sbjct: 14 GDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQRVLLQIWDTA 73
Query: 250 G 252
G
Sbjct: 74 G 74
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VD-GKPINLGLWDTAGQ 255
+V+GD VGKT ++ + N F Y T+ +++ ++ VD ++L +WD +GQ
Sbjct: 15 LVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQKTTI 267
V++G+ AVGK+ L++ + F T+ + + V +D I +WDTAGQ+
Sbjct: 23 VLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYH 82
Query: 268 DSAPSLTHRRTSSLYVFRWSTQ 333
AP +++ V+ + Q
Sbjct: 83 SLAPMYYRGAQAAIVVYDITNQ 104
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRE 434
E + LR Y Q +I F + +++NV W+ ++ C + PI+L G K+D+++
Sbjct: 3 EKFGGLRDGYYIQGQCAIIMFDVTARVTYKNV-PNWHHDLARVCENIPIVLCGNKVDVKD 61
Query: 435 DK 440
K
Sbjct: 62 RK 63
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 291 QTDVFLICFSLVNPASFENVRAKWYPEVRH---HCPSTPIILVGTKLD 425
Q +V + +S+ + ++ + ++ KW P +R TP+ILVG K D
Sbjct: 79 QANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSD 126
>U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical
protein C47C12.4 protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 291 QTDVFLICFSLVNPASFENVRAKWYPEVRH---HCPSTPIILVGTKLD 425
Q +V + +S+ + ++ + ++ KW P +R TP+ILVG K D
Sbjct: 19 QANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSD 66
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGK-PINLGLWDTAGQ 255
VVVGDGA GKT + + +F Y T+ D +S + + + + + +WD GQ
Sbjct: 39 VVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQ 95
>Z77659-7|CAB01166.2| 137|Caenorhabditis elegans Hypothetical
protein F23B12.4 protein.
Length = 137
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 567 FRPFCVSAEHSKYLTAFISLTC 502
+R FC S H +YLTAF + TC
Sbjct: 110 WRQFCASPSHQQYLTAFCARTC 131
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 LISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQKTTIDSAPS 282
++ + + F E T+ ++ M +DG + L +WDTAGQ+ PS
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPS 52
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 31.5 bits (68), Expect = 0.64
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKP----INLGLWDTAGQ 255
VV+GD VGKT ++ + A T+ ++ S +V D + + L +WDTAGQ
Sbjct: 56 VVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTAGQ 115
Query: 256 KTTIDSAPSLTHRRTSSLYVF 318
+ P ++L V+
Sbjct: 116 ERFRCMVPMYMRNADAALIVY 136
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPT---VFDNYSANVMVDGKPINLGLWDTAGQKT 261
V+ GD VGKTCL +F EY+ T N + N + + +WD Q T
Sbjct: 47 VIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRATDDVVKVDVWDIVDQST 106
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 172 PTVFDNYSANVMVDGKPINLGLWDTAGQKTTIDSAPSLTHRRTSSLYVFRWSTQPHSKTF 351
P F ++ + G P + + + + TT APS+T + TS++ V P + T
Sbjct: 131 PGFFPQFAGSTTSQGNPSEVSVRTKSAEGTTGPIAPSITTKPTSTIQVAP-PRDPVAPTT 189
Query: 352 GPSGIQK 372
SGI K
Sbjct: 190 SSSGITK 196
>Z49907-5|CAA90087.1| 327|Caenorhabditis elegans Hypothetical
protein B0491.5 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 407 QDDGRRRAVMPNFWIPLGPNVFE 339
+D+ R AV+PN W P GP F+
Sbjct: 143 KDELGRNAVLPNSWYPAGPRFFD 165
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKP----INLGLWDTAGQ 255
VV+GD VGKT ++ + A T+ ++ S +V D + + L +WDTAGQ
Sbjct: 56 VVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTAGQ 115
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDN-YSANVMVD 213
+++GD VGKT L+ Y +Y+ F N Y A + D
Sbjct: 13 IILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGAD 54
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -3
Query: 275 AESIVVFCPAVSQRPKLIGFPSTMTFAE*LSNTVGIYSPGKAFVV*LMSRHVLPTAPSPT 96
+ S++ +QRP G PST++ ++ S+T I S + S + PSPT
Sbjct: 331 SSSVIPTTTQTTQRPTSTGIPSTVSTSQGTSSTSPIPSTTQTSSS-APSTYTSNFTPSPT 389
Query: 95 TTHLIACI 72
TT L + I
Sbjct: 390 TTLLTSTI 397
>AC024785-2|AAF60599.2| 467|Caenorhabditis elegans C-type lectin
protein 71 protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 255 EDYDRLRPLSYPQTDVFLICFSLVNPASFENVR---AKWY 365
E + L P+S PQ D FLI S+ + NV+ KWY
Sbjct: 359 EGFQVLPPMSVPQFDDFLIMVSVQSHLPVSNVQYVNLKWY 398
>Z69662-3|CAA93502.1| 449|Caenorhabditis elegans Hypothetical
protein F56D5.3 protein.
Length = 449
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 363 YPEVRHHCPSTPIILVGTKLDLREDKDTIEKLKDKKLAPITY 488
Y E+R P T L+G K + +E +D ++D K I Y
Sbjct: 230 YDEIRKEIPETSGFLIGIKTNSKEFQDKGTTVEDAKQMCIEY 271
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 91 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQKT 261
+VVG GKT +L +Y T E PT+ N V + ++ +WD GQ++
Sbjct: 21 IVVGLDNAGKTTILYNYVTKD-QVETKPTIGSNVEE---VSYRNLDFVIWDIGGQES 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,121,801
Number of Sequences: 27780
Number of extensions: 367009
Number of successful extensions: 1197
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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