Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0070
(765 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 144 1e-35
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 134 1e-32
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 87 3e-18
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 70 4e-13
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 62 8e-11
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 61 1e-10
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 61 1e-10
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 59 8e-10
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 58 1e-09
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 57 2e-09
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 55 1e-08
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 55 1e-08
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 54 2e-08
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 52 7e-08
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 52 7e-08
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 50 4e-07
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 50 4e-07
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 47 3e-06
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 47 3e-06
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 46 4e-06
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 45 1e-05
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 44 3e-05
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 38 0.002
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 32 0.10
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 30 0.42
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 28 1.7
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 27 2.2
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 27 2.9
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 27 2.9
SPAP27G11.02 |||TPR repeat protein, unknown biological role|Schi... 27 2.9
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 27 3.9
SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual 27 3.9
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 27 3.9
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 26 5.1
SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P... 26 5.1
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 26 6.8
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 26 6.8
SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces p... 26 6.8
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 25 9.0
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 25 9.0
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 144 bits (349), Expect = 1e-35
Identities = 66/84 (78%), Positives = 79/84 (94%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
RDV+AQAQSGTGKTATFSIS+LQ+IDTS+++CQALILAPTRELAQQIQKVV+ALGD +N
Sbjct: 57 RDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNV 116
Query: 437 KCHACIGGTNVREDIRQLESGVHV 508
+CHACIGGT VR+D+ L++GVHV
Sbjct: 117 ECHACIGGTLVRDDMAALQAGVHV 140
Score = 118 bits (284), Expect = 9e-28
Identities = 54/77 (70%), Positives = 66/77 (85%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
VGTPGRV+DMI RRAL + +++FVLDEADEMLSRGFKDQI+D+F++L QV+LLSAT
Sbjct: 142 VGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSAT 201
Query: 691 MPDDVLEVSRCFMRDPV 741
MP DVLEV+ FMRDP+
Sbjct: 202 MPQDVLEVTTKFMRDPI 218
Score = 82.2 bits (194), Expect = 7e-17
Identities = 34/50 (68%), Positives = 45/50 (90%)
Frame = +3
Query: 102 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 251
++ ++T++D+V++TFDDMNLK ELLRGIYAYGFE+PSAIQQRAIMP +
Sbjct: 5 LEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPIL 54
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 134 bits (324), Expect = 1e-32
Identities = 63/84 (75%), Positives = 73/84 (86%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
RDVIAQAQSGTGKTATFSI ILQ ID S+R+ QALIL+PTRELA QIQ VV+ALGDH+N
Sbjct: 59 RDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNV 118
Query: 437 KCHACIGGTNVREDIRQLESGVHV 508
+CHACIGGT+V DI++L+ G HV
Sbjct: 119 QCHACIGGTSVGNDIKKLDYGQHV 142
Score = 93.5 bits (222), Expect = 3e-20
Identities = 40/76 (52%), Positives = 58/76 (76%)
Frame = +1
Query: 514 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM 693
GTPGRV DMI RR L +K+ +LDEADE+L++GFK+QI+D+++ L QV+++SAT+
Sbjct: 145 GTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVVSATL 204
Query: 694 PDDVLEVSRCFMRDPV 741
P DVLE++ F +PV
Sbjct: 205 PQDVLEMTNKFTTNPV 220
Score = 58.0 bits (134), Expect = 1e-09
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +3
Query: 102 MDPGTLDTDWD-QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 242
M+ L T D V +F++MNLKE+LLRGIYAYG+E PSA+Q RAI+
Sbjct: 6 MENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAII 53
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 86.6 bits (205), Expect = 3e-18
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
RD++A+A++GTGKTA F I L+++DT + Q LIL PTRELA Q +V LG H+N
Sbjct: 82 RDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNV 141
Query: 437 KCHACIGGTNVREDIRQLESGVHV 508
K GGT +R+DI +L VH+
Sbjct: 142 KVMVTTGGTTLRDDIIRLNDTVHI 165
Score = 46.0 bits (104), Expect = 6e-06
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
VGTPGRV D+ + + FV+DEAD++LS F I + + Q+ L SAT
Sbjct: 167 VGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSAT 226
Query: 691 MP 696
P
Sbjct: 227 FP 228
Score = 42.3 bits (95), Expect = 7e-05
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 54 KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET----FDDMNLKEELLRGIYAYGFEKPSA 221
+N D+ S+ G P + + V +T F+D LK ELL GI+ GFE+PS
Sbjct: 10 ENANLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEAGFERPSP 69
Query: 222 IQQRAI 239
IQ+ +I
Sbjct: 70 IQEESI 75
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 69.7 bits (163), Expect = 4e-13
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +2
Query: 248 HPRRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 427
+P R++I Q+QSGTGKTA F++++L ++D S+ + QA+ LAP+RELA+QI VV +G +
Sbjct: 151 NPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKY 210
Query: 428 LNAK 439
K
Sbjct: 211 TEVK 214
Score = 60.9 bits (141), Expect = 2e-10
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSA 687
+GTPG V D++ RR L A IK+FVLDEAD ML +G DQ + +L + Q++L SA
Sbjct: 235 IGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSA 294
Query: 688 TMPDDVLEVSRCF 726
T + V + + F
Sbjct: 295 TFSERVEKYAERF 307
Score = 43.6 bits (98), Expect = 3e-05
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 239
V++F+++ LK ELL+GIY+ F+KPS IQ++A+
Sbjct: 113 VKSFEELELKPELLKGIYSMKFQKPSKIQEKAL 145
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 62.1 bits (144), Expect = 8e-11
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
+ TPGR+ DM+ + + VLDEAD ML GF+ QI + + D Q ++ SAT
Sbjct: 250 IATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSAT 309
Query: 691 MPDDVLEVSRCFMRDPVPHT 750
P +V ++R ++ D + T
Sbjct: 310 WPKEVQRLARDYLNDYIQVT 329
Score = 39.9 bits (89), Expect = 4e-04
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVIALG 421
RD++ + +G+GKT ++ + + I+ L+LAPTRELA QIQ+ G
Sbjct: 160 RDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFG 219
Query: 422 DHLNAKCHACIGGTNVREDIRQLESGVHV 508
+ GG IR L GV +
Sbjct: 220 KSSRIRNTCVYGGVPRGPQIRDLIRGVEI 248
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 236
V TF++ +L+ + GFE P+ IQQ+A
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQA 152
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 61.3 bits (142), Expect = 1e-10
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +2
Query: 254 RRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 433
+RDVI AQ+G+GKTA F++ ++Q++ + A++LAPTRELA QI + A+G +
Sbjct: 83 KRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQFEAIGGSIG 142
Query: 434 AKCHACIGGTNVREDIRQLESGVHV 508
+ +GG ++ L HV
Sbjct: 143 VRSVVIVGGMDMVTQAVALSKKPHV 167
Score = 46.4 bits (105), Expect = 4e-06
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 687
V TPGR+ D + + +K ++DEAD +L F I + K++ + + +L SA
Sbjct: 169 VCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSA 228
Query: 688 TMPDDVLEVSRCFMRDPV 741
TM V ++ R + PV
Sbjct: 229 TMTSKVEKLQRASLHQPV 246
Score = 31.5 bits (68), Expect = 0.14
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 6 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 185
M+ S ++ +ED S N + S + D+ ++ +TF ++ + +EL
Sbjct: 1 MAPSEKKLTEDKKNSSLNKKIETSNS-SSEKSSENNNGDSQNNEAPKTFKELGVIDELCE 59
Query: 186 GIYAYGFEKPSAIQQRAI 239
GF+ P+ IQQ AI
Sbjct: 60 ACEKLGFKTPTPIQQEAI 77
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 61.3 bits (142), Expect = 1e-10
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +1
Query: 499 CSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK---MLSADV- 666
C TPGR+ D+I R + IK VLDEAD ML GF+ QI + + M S +
Sbjct: 306 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEER 365
Query: 667 QVILLSATMPDDVLEVSRCFMRDPV 741
Q ++ SAT P D+ ++R F++D V
Sbjct: 366 QTLMFSATFPRDIQLLARDFLKDYV 390
Score = 37.9 bits (84), Expect = 0.002
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISIL--------------QQIDTSIRECQA----LILAPTRE 382
RD++A AQ+G+GKTA F IL Q R +A LILAPTRE
Sbjct: 207 RDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRE 266
Query: 383 LAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 499
L QI + + A GG ++R IRQ++ G
Sbjct: 267 LVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQG 305
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 58.8 bits (136), Expect = 8e-10
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +1
Query: 502 SCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK-----MLSADV 666
S +GTPGR+ D+I ++ + + VLDEAD ML GF+ I ++ +
Sbjct: 287 SVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSR 346
Query: 667 QVILLSATMPDDVLEVSRCFMRDPVPHT 750
Q + SAT P+ V ++ F++DPV T
Sbjct: 347 QTVFFSATWPESVRALAATFLKDPVKIT 374
Score = 42.3 bits (95), Expect = 7e-05
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIALGDH 427
RDV+ A++G+GKT F I LQ ++ + + L+++PTRELA Q + + +L
Sbjct: 203 RDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNSLIQG 262
Query: 428 LNAKCHACIGGTNVREDIR 484
N K GG E R
Sbjct: 263 TNLKAVVVYGGAPKSEQAR 281
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 58.0 bits (134), Expect = 1e-09
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSA 687
V TPGR+ ++ + L N++K FVLDE D++L S + I +VF+ QV++ SA
Sbjct: 178 VATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSA 237
Query: 688 TMPDDVLEVSRCFMRDPV 741
T+ +++ + + FM++P+
Sbjct: 238 TLSNEIRPICKKFMQNPL 255
Score = 57.2 bits (132), Expect = 2e-09
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 436
DV+ QA+SG GKTA F +S LQQI+ E L+L TRELA QI+ +L +
Sbjct: 90 DVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDV 149
Query: 437 KCHACIGGTNVREDI 481
+ GG N+++D+
Sbjct: 150 RTAVFYGGINIKQDM 164
Score = 32.7 bits (71), Expect = 0.059
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 239
F D LK ELLR I GFE PS +QQ I
Sbjct: 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCI 82
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 57.2 bits (132), Expect = 2e-09
Identities = 33/84 (39%), Positives = 47/84 (55%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
R+ I A++G+GKTA F++ I+++ ALIL PTRELA QI + ALG +LN
Sbjct: 45 RNCIGGAKTGSGKTAAFALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNL 104
Query: 437 KCHACIGGTNVREDIRQLESGVHV 508
K +GG ++ L HV
Sbjct: 105 KHALIVGGMDMIRQSIDLSKRPHV 128
Score = 47.2 bits (107), Expect = 3e-06
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHA----NTIKLFVLDEADEMLSRGFKDQIHDVFKML--SADVQV 672
V TPGR+ D+I IK V+DEAD +LS F D + D F +L S D Q
Sbjct: 130 VATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDRQT 189
Query: 673 ILLSATMPDDVLEV 714
+L +AT+ D + ++
Sbjct: 190 LLFTATVTDAIRQL 203
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 55.2 bits (127), Expect = 1e-08
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 VGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 687
+ TPGR D M + I++ V+DEAD ML GF D+++++ + Q +L SA
Sbjct: 385 IATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSA 444
Query: 688 TMPDDVLEVSRCFMRDPV 741
TM D V ++ R + PV
Sbjct: 445 TMTDKVDDLIRLSLNRPV 462
Score = 50.8 bits (116), Expect = 2e-07
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDH 427
+D++ A +G+GKTA F + IL+++ + + LIL PTRELA Q V +
Sbjct: 297 KDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASF 356
Query: 428 LNAKCHACIGGTNVREDIRQL 490
+ CIGG +++ ++L
Sbjct: 357 TDIMVCLCIGGLSLKLQEQEL 377
Score = 31.9 bits (69), Expect = 0.10
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 239
+F MNL +L+G+ GFE P+ IQ + I
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTI 290
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 55.2 bits (127), Expect = 1e-08
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Frame = +2
Query: 254 RRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQ------ALILAPTRELAQQIQKVV 409
R+D+I A++G+GKTA F I ++ I + E A++LAPTRELAQQIQ
Sbjct: 286 RKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEG 345
Query: 410 IALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
+ L +C + +GG E Q+ G H+
Sbjct: 346 NKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHI 378
Score = 44.8 bits (101), Expect = 1e-05
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML------------ 654
V TPGR+ D + RR + V+DEAD ML GF+D ++ + L
Sbjct: 380 VATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSI 439
Query: 655 -------SADVQVILLSATMPDDVLEVSRCFMRDPV 741
S+ Q I+ SAT+P V +++ ++ +PV
Sbjct: 440 LATANSSSSRRQTIMFSATLPPRVANLAKSYLIEPV 475
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 54.4 bits (125), Expect = 2e-08
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
V TPGR + L ++I+ V DEAD + GF Q+ ++ L Q +L SAT
Sbjct: 194 VATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFSAT 253
Query: 691 MPDDVLEVSRCFMRDPV 741
+P +++ ++ ++DPV
Sbjct: 254 LPRTLVDFAKAGLQDPV 270
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHL 430
RDV+ A++G+GKTA F I +++ + +++ +ALIL+P RELA Q KVV
Sbjct: 107 RDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGT 166
Query: 431 NAKCHACIGGTNVREDIRQL 490
+ + A +GG ++ E L
Sbjct: 167 DLRSVAIVGGVSLEEQFSLL 186
Score = 31.5 bits (68), Expect = 0.14
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 239
F M L + LLR I+ GF+ P+ IQ++ I
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTI 100
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 52.4 bits (120), Expect = 7e-08
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQALILAPTRELAQQIQKVVIAL 418
+D++AQA++G+GKTA + I IL+ QID + R AL+L PTRELAQQ+ V+
Sbjct: 52 KDLVAQARTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVL--- 108
Query: 419 GDHLNAKCHACIGGTNV 469
+ L A C I NV
Sbjct: 109 -EKLTAFCSKHIRFINV 124
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
+ TP R + L + +K V+DEAD MLS G+ + + + + L Q L+SAT
Sbjct: 145 IATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMSAT 204
Query: 691 MPDDVLEVSRCFMRDP 738
+ ++ + + R+P
Sbjct: 205 LSKNIASLQKLVCRNP 220
Score = 32.7 bits (71), Expect = 0.059
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 239
+TF D NL L R I+ FEKP+++Q I
Sbjct: 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETI 45
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 52.4 bits (120), Expect = 7e-08
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIALGDHLN 433
D+I +A +G+GKT F I IL+ + + QAL++APTRELA QI + + N
Sbjct: 161 DIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPSPN 220
Query: 434 AKCHACIGGTNVREDIRQLESGVHV 508
+ + GG V++ R L HV
Sbjct: 221 IRVMSITGGLAVQKQQRLLNKHPHV 245
Score = 36.7 bits (81), Expect = 0.004
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHAN--TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV----QV 672
V TPGR++ +I L N IK VLDEAD +L + +++ + ++L + Q
Sbjct: 247 VATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQRQT 306
Query: 673 ILLSATMPD 699
+ SAT +
Sbjct: 307 FIFSATFDE 315
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 50.0 bits (114), Expect = 4e-07
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 511 VGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 681
V TPGR+ D+++ R + + VLDEAD M GF+ Q+ + + D Q +L
Sbjct: 546 VCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLF 605
Query: 682 SATMPDDVLEVSRCFMRDPVPHT 750
SAT P + ++R ++ PV T
Sbjct: 606 SATFPRAMEALARKVLKKPVEIT 628
Score = 45.2 bits (102), Expect = 1e-05
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +2
Query: 242 ALHPRRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKV 406
A+ RDVI A++G+GKT F + + + I ++ + A+I+ PTRELA QI +
Sbjct: 451 AITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRE 510
Query: 407 VIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
LN + GG +++ I L+ G +
Sbjct: 511 CKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEI 544
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 126 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 239
D + V ++ L + + I + G+EKP++IQ +AI
Sbjct: 412 DCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAI 449
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 50.0 bits (114), Expect = 4e-07
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQID----TSIRECQALILAPTRELAQQIQKVVIALGD 424
RD++ A++G+GKT F + +++ + TS+ AL+++PTRELA Q + ++ +G
Sbjct: 77 RDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGR 136
Query: 425 HLNAKCHACIGGTNVREDIRQL 490
+ IGG N +E+ +L
Sbjct: 137 LHSFSAGLIIGGNNYKEEKERL 158
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 687
V TPGR+ I + + +++ +LDEAD +L GF+ + + L Q +L SA
Sbjct: 165 VCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSA 224
Query: 688 TMPDDVLEVSRCFMRDP 738
T V +++R +++P
Sbjct: 225 TQTKSVKDLARLSLQNP 241
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 46.8 bits (106), Expect = 3e-06
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML-SADVQVILLS 684
V TPGR+ D + + ++ V+DEAD +L GF+D++ + K+L S + Q +L S
Sbjct: 216 VATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFS 275
Query: 685 ATMPDDVLEVSRCFMR 732
AT V +++R ++
Sbjct: 276 ATQTTKVEDLARISLK 291
Score = 44.0 bits (99), Expect = 2e-05
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGD 424
RDV+ A++G+GKT F +I +L + R +I++PTRELA QI V L
Sbjct: 127 RDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLK 186
Query: 425 HLNAKCHACIGGTNVREDIRQLESGVHV 508
+ + IGG N R + +L GV++
Sbjct: 187 YHHQTFGIVIGGANRRAEADKLVKGVNL 214
Score = 33.1 bits (72), Expect = 0.045
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 251
+E F D+ L E + + I GFE + IQ+R+I P +
Sbjct: 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLL 124
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 46.8 bits (106), Expect = 3e-06
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Frame = +2
Query: 218 CNPATRNNALHPRRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPT 376
C PA N +D +AQ+G+GKT + + I+Q++ T A+I+APT
Sbjct: 169 CLPALLNT---DDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPT 225
Query: 377 RELAQQIQKVVIALGD----HLNAKCHACIGGTNVREDIRQLESGVHV 508
REL QQI V L + H C+ IGG + + ++ GV++
Sbjct: 226 RELCQQIYNVANKLNNNPLSHWIVSCNV-IGGEKKKSEKARIRKGVNI 272
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 687
+GTPGR+ D + AL + ++ VLDE D ++ GF++ + + L + +I
Sbjct: 274 IGTPGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKDL 333
Query: 688 TMPD-DVLEVSRCFMRDPV 741
++P V + M+D V
Sbjct: 334 SIPSRKVTMLCSATMKDTV 352
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 46.4 bits (105), Expect = 4e-06
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +1
Query: 502 SCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 681
S +GTPGR+ +M++ + + +++ +LDEAD ++ GF+ + + L + L
Sbjct: 134 SVVIGTPGRLNEMLSH--ISSKHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGLF 191
Query: 682 SATMPDDV 705
SATM D V
Sbjct: 192 SATMNDTV 199
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKV 406
+D++ +A +G+GKT + + ++ DT ALI+APTRELA QI V
Sbjct: 39 KDLVVEAVTGSGKTLAYLLPCFDKVTRRDTDETGLGALIVAPTRELATQIFNV 91
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI-HDVFKMLSADVQVILLSA 687
+GTP R+ I + L ++ FV+DEAD + GF +Q H + S+++ L SA
Sbjct: 171 IGTPMRLVQAI-QTGLSFEKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSA 229
Query: 688 TMPDDVLEVSRCFMRDPV 741
T+P V E+++ DP+
Sbjct: 230 TIPSRVEELAKVVTVDPI 247
Score = 43.2 bits (97), Expect = 4e-05
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 254 RRDVIAQAQSGTGKTATFSISILQQIDTSI-RECQALILAPTRELAQQIQK 403
+RD++A A +G+GKT + ILQ++ + +A+I+APTREL +QI +
Sbjct: 83 KRDLLACAPTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCEQIYR 133
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 43.6 bits (98), Expect = 3e-05
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFK-MLSADVQVILLS 684
+ TPGR+ D + R L + + F+LDEAD ++ GF + I ++ + + + + + S
Sbjct: 168 IATPGRLEDHLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFS 227
Query: 685 ATMPDDVLEVSR 720
ATMP V V R
Sbjct: 228 ATMPPKVSNVFR 239
Score = 35.5 bits (78), Expect = 0.008
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 239 NALHPRRD-VIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQ 400
N + P + + QA++GTGKT F + + + + + ++IL+PTRELA QI
Sbjct: 70 NEVFPNEENAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSVILSPTRELALQIF 129
Query: 401 KVVIALGDHLNAKCHACIGG-TNVRED 478
+ L + IGG + +RE+
Sbjct: 130 EEARKLTYGTGIRVSYAIGGNSKMREE 156
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
DV A +G+GKT ++ I I+Q + ++ + +++ PTREL Q+ K
Sbjct: 175 DVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQVAKTFEYYMSGAGL 234
Query: 437 KCHACIGGTNVREDIRQL 490
+ A G ++R + QL
Sbjct: 235 QVCAWTGQKSLRHETYQL 252
Score = 34.7 bits (76), Expect = 0.015
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 657
V TPGR+ D I + ++ V+DEAD +L + F+D + V +S
Sbjct: 265 VSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEIS 314
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 31.9 bits (69), Expect = 0.10
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 209 KTFCNPATRNNALHPRRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA 388
KT+ + A N L VI + +GK+ + I ILQ + + A + PT+ LA
Sbjct: 311 KTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSL-LEDNQSTAFFVFPTKSLA 369
Query: 389 QQIQKVVI 412
Q +K +I
Sbjct: 370 QDQKKSLI 377
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 29.9 bits (64), Expect = 0.42
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 117 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQD 257
LDT+W V + NL+ + + I + F PS I + MP + D
Sbjct: 184 LDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDMPSLND 230
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 114 TLDTDWDQVVETFDDMNLKEELLRGIYAYGF 206
T D WD E FDD N + +GI+ F
Sbjct: 281 TDDIAWDPQCEYFDDCNSDQTAFKGIFMQSF 311
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 284 GTGKTATFSISILQQI----DTSIRECQALILAP-TRELAQQIQ 400
G G T F+ SILQQI + SI +C + +P R + ++IQ
Sbjct: 89 GKGSTCAFTSSILQQIQKSGERSIPKCIGMYTSPHLRSVCERIQ 132
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 27.1 bits (57), Expect = 2.9
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 502 SCXVGTPGRVYDMITRRALHANTIKLFVLDEADEM--LSRGFKDQIHDVFKMLSADVQVI 675
SC + T + M+ R A ++ + DE + L RG + +V ML V +I
Sbjct: 364 SCLLMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWE--EVIIMLPPHVTLI 421
Query: 676 LLSATMPD 699
LLSAT+P+
Sbjct: 422 LLSATVPN 429
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 316 DSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 417
D+ TNR + SSFD S P+N++G ++
Sbjct: 487 DAWTNRKRPGYSSSFDGSSQSTFNPSNNDGAHNT 520
>SPAP27G11.02 |||TPR repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -3
Query: 526 DLECPPXMNTTLQLANIFTDIGATNASMAFSIQVITKS 413
D+E PP LQ+AN+ GA + + + ++ ++
Sbjct: 103 DMESPPVQGIRLQMANLLASAGALHKAWSMYWDILERT 140
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 26.6 bits (56), Expect = 3.9
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 359 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVWWALQVVYMI 538
L L P E KVV+ L D L + G N+R LE G WA +V Y
Sbjct: 31 LSLYPDLETFTYGGKVVVTL-DVLEDSNSITLHGINLRILTAALEWGSQTVWASEVSYGD 89
Query: 539 **LVVRFMPT-PSNFLFLMKL 598
+V++F T P+N + ++ L
Sbjct: 90 ERIVLQFPSTVPANSVAVLTL 110
>SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 91 DLREWTLGHLTPT 129
DLREWTLG L P+
Sbjct: 110 DLREWTLGFLQPS 122
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 526 RVYDMITRRALHANTIKLFVLDEADEM 606
++ + + R + A+T K+ +LDEAD M
Sbjct: 106 QIKNFASTRQIFASTFKMIILDEADAM 132
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 598 DEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVL 708
+EMLS +H V+ S + + LS+T P+ +L
Sbjct: 299 EEMLSPSSLYTLHQVYTATSESINIKTLSSTTPEYIL 335
>SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein
Pvg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 389
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 430 QVITKSYHHLLNLLGQLSCGSQDQ 359
+++ KSYH+L N QLS ++DQ
Sbjct: 165 ELVDKSYHNLHNAWSQLSREAKDQ 188
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 395 IQKVVIALGDHLNAKCHACIGGTNVRED 478
++ + A+ DHL+ + CIG N+ ED
Sbjct: 134 VEMIRRAISDHLDLLNNCCIGIANLNED 161
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -3
Query: 490 QLANIFTDIGAT---NASMAFSIQVITKSYHHLLNLL 389
+L NIFT + N+ FS+ +++++Y H NLL
Sbjct: 598 KLQNIFTTLYTAWCHNSIAVFSLCLLSQNYEHAANLL 634
>SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 101
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 111 QGPFPEVHRNYLDPSMAHFWNPLANL 34
Q P P VH ++ PS A NPL ++
Sbjct: 75 QNPPPSVHSSHKQPSKARSPNPLLSM 100
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 640 VFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVPHTC 753
VF + IL T P V + + F+ P+PH+C
Sbjct: 728 VFLTFTGMTLFILYQLTFPYGVAKDNSSFIDTPLPHSC 765
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 636 MDLVLETSGQHFISFIKNKKFDGVGMKRTTSYHI 535
+D V E HF F+KN+ D + +R H+
Sbjct: 476 LDAVYERECNHFKKFVKNELKDSLESQRVDLRHL 509
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,451,341
Number of Sequences: 5004
Number of extensions: 75946
Number of successful extensions: 305
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -