Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0070
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 140 7e-34
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 140 7e-34
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 121 6e-28
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 121 6e-28
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 92 5e-19
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 79 5e-15
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 69 5e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 69 5e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 59 4e-09
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 59 4e-09
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 58 5e-09
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 57 2e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 57 2e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 53 2e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 52 6e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 51 1e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 51 1e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 49 4e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 1e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 1e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 48 1e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 1e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 47 1e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 45 7e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 45 7e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 42 4e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 42 4e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 42 4e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.003
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.024
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.024
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 36 0.032
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.042
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.17
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 0.68
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.68
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 1.2
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 2.1
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 4.8
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.8
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 8.4
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 8.4
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 140 bits (340), Expect = 7e-34
Identities = 66/89 (74%), Positives = 78/89 (87%)
Frame = +2
Query: 242 ALHPRRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 421
A+ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 422 DHLNAKCHACIGGTNVREDIRQLESGVHV 508
D++N +CHACIGGTN+ EDIR+L+ G HV
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Score = 101 bits (242), Expect = 6e-22
Identities = 44/76 (57%), Positives = 60/76 (78%)
Frame = +1
Query: 514 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM 693
GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D+++ L QV+LLSAT+
Sbjct: 150 GTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATL 209
Query: 694 PDDVLEVSRCFMRDPV 741
P ++LE++ FM DP+
Sbjct: 210 PHEILEMTSKFMTDPI 225
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQDA 260
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ P I A
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV-PAILKA 63
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 140 bits (340), Expect = 7e-34
Identities = 66/89 (74%), Positives = 78/89 (87%)
Frame = +2
Query: 242 ALHPRRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 421
A+ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 422 DHLNAKCHACIGGTNVREDIRQLESGVHV 508
D++N +CHACIGGTN+ EDIR+L+ G HV
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Score = 101 bits (242), Expect = 6e-22
Identities = 44/76 (57%), Positives = 60/76 (78%)
Frame = +1
Query: 514 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM 693
GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D+++ L QV+LLSAT+
Sbjct: 150 GTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATL 209
Query: 694 PDDVLEVSRCFMRDPV 741
P ++LE++ FM DP+
Sbjct: 210 PHEILEMTSKFMTDPI 225
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQDA 260
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI P I A
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI-PAILKA 63
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 121 bits (291), Expect = 6e-28
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 437 KCHACIGGTNVREDIRQLESGVHV 508
CIGGT+VR+D R+LE+G+HV
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGIHV 150
Score = 113 bits (273), Expect = 1e-25
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
VGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LLSAT
Sbjct: 152 VGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSAT 211
Query: 691 MPDDVLEVSRCFMRDPV 741
MP +VL+V+ FMR+P+
Sbjct: 212 MPSEVLDVTNRFMRNPI 228
Score = 79.4 bits (187), Expect = 3e-15
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +3
Query: 111 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 248
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 121 bits (291), Expect = 6e-28
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 437 KCHACIGGTNVREDIRQLESGVHV 508
CIGGT+VR+D R+LE+G+HV
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGIHV 150
Score = 113 bits (273), Expect = 1e-25
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
VGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LLSAT
Sbjct: 152 VGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSAT 211
Query: 691 MPDDVLEVSRCFMRDPV 741
MP +VL+V+ FMR+P+
Sbjct: 212 MPSEVLDVTNRFMRNPI 228
Score = 79.4 bits (187), Expect = 3e-15
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +3
Query: 111 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 248
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 91.9 bits (218), Expect = 5e-19
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
+GTP D ++ + IK+FVLDEADEMLS+GFKDQI++VF+ + DVQV+LLSAT
Sbjct: 114 MGTPK---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSAT 170
Query: 691 MPDDVLEVSRCFMRDPV 741
MP +VL+V+ FMRDP+
Sbjct: 171 MPSEVLDVTNRFMRDPI 187
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 159 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQDAMLSLKPSQELEKLLLSL 311
M LKEELLRGIY +GFEKPSAIQ+ A+ PC ++++ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN
Sbjct: 34 KDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNV 93
Query: 437 KCHACIGGTNVRED 478
C+G E+
Sbjct: 94 NA-TCLGFDTTAEN 106
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 78.6 bits (185), Expect = 5e-15
Identities = 31/84 (36%), Positives = 57/84 (67%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L H+
Sbjct: 81 QDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQL 140
Query: 437 KCHACIGGTNVREDIRQLESGVHV 508
K GGT++R+DI +L VH+
Sbjct: 141 KVMVTTGGTDLRDDIMRLNGTVHL 164
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
+ TPGR+ D++ + K VLDEAD++LS+ F+ + + L + QV+L SAT
Sbjct: 166 IATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSAT 225
Query: 691 MPDDVLEVSRCFMRDP 738
P+ V + M P
Sbjct: 226 FPNTVTSFMQKHMHKP 241
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 239
F+D L +LL GI+ G+EKPS IQ+ +I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/83 (42%), Positives = 48/83 (57%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 439
D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG + K
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 440 CHACIGGTNVREDIRQLESGVHV 508
C +GG ++ R+L HV
Sbjct: 188 CSVIVGGRSLIHQARELSERPHV 210
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +1
Query: 511 VGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 678
V TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S Q +L
Sbjct: 212 VATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLL 271
Query: 679 LSATMPDDVLEVSRCFMRDP 738
LSAT+ +++ + R R P
Sbjct: 272 LSATITNNINMLHRVSTRKP 291
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/83 (42%), Positives = 48/83 (57%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 439
D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG + K
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 440 CHACIGGTNVREDIRQLESGVHV 508
C +GG ++ R+L HV
Sbjct: 188 CSVIVGGRSLIHQARELSERPHV 210
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +1
Query: 511 VGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 678
V TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S Q +L
Sbjct: 212 VATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLL 271
Query: 679 LSATMPDDVLEVSRCFMRDP 738
LSAT+ +++ + R R P
Sbjct: 272 LSATITNNINMLHRVSTRKP 291
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
V TPGR+ DM+T++ ++ + VLDEAD ML GF+D+I +F A Q +L SAT
Sbjct: 327 VATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSAT 386
Query: 691 MPDDVLEVSRCFMRDPV 741
MP + ++ + P+
Sbjct: 387 MPRKIQFFAKSALVKPI 403
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQA---LILAPTRELAQQIQKVVI 412
RD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI ++I
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLII 287
Query: 413 ALGDHL------NAKCHACIGGTNVREDIRQLESGVHV 508
+ D L + CIGG + E + + G+H+
Sbjct: 288 EMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHI 325
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 424
+ P ++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 245 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 304
Query: 425 HL-NAKCHACIGGTNV 469
+ N K H I G N+
Sbjct: 305 FIDNLKIHYAIKGGNM 320
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVI 675
+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ +
Sbjct: 334 IGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSM 393
Query: 676 LLSATMPDDVLEVSRCFMRDPV 741
L SAT + V+ + +++ +
Sbjct: 394 LFSATYDEPVINFATKIIKNAI 415
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 424
+ P ++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 270 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 329
Query: 425 HL-NAKCHACIGGTNV 469
+ N K H I G N+
Sbjct: 330 FIDNLKIHYAIKGGNM 345
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVI 675
+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ +
Sbjct: 359 IGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSM 418
Query: 676 LLSATMPDDVLEVSRCFMRDPV 741
L SAT + V+ + +++ +
Sbjct: 419 LFSATYDEPVINFATKIIKNAI 440
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 424
+ P ++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 654 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 713
Query: 425 HL-NAKCHACIGGTNV 469
+ N K H I G N+
Sbjct: 714 FIDNLKIHYAIKGGNM 729
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVI 675
+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ +
Sbjct: 743 IGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSM 802
Query: 676 LLSATMPDDVLEVSRCFMRDPV 741
L SAT + V+ + +++ +
Sbjct: 803 LFSATYDEPVINFATKIIKNAI 824
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLN 433
+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTG 121
Query: 434 AKCHACIGGTNVRE 475
+C +GG + E
Sbjct: 122 LRCACLVGGDQIEE 135
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/99 (29%), Positives = 51/99 (51%)
Frame = +1
Query: 445 CLHWWHQCP*RYSPTGEWCSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 624
CL Q ++S E + TPGR+ +I L + ++ V DEAD + GF+
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQ 185
Query: 625 DQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 741
DQ+ + K + Q +L SAT+P +++ ++ + DP+
Sbjct: 186 DQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPM 224
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLN 433
+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTG 121
Query: 434 AKCHACIGGTNVRE 475
+C +GG + E
Sbjct: 122 LRCACLVGGDQIEE 135
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/99 (29%), Positives = 51/99 (51%)
Frame = +1
Query: 445 CLHWWHQCP*RYSPTGEWCSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 624
CL Q ++S E + TPGR+ +I L + ++ V DEAD + GF+
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQ 185
Query: 625 DQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 741
DQ+ + K + Q +L SAT+P +++ ++ + DP+
Sbjct: 186 DQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPM 224
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSA 687
VGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++ SA
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSA 225
Query: 688 TMPDDVLEVSRCFMRDPV 741
T+P ++ V + FM+DP+
Sbjct: 226 TLPKELRTVCKRFMQDPM 243
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 436
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 80 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGV 139
Query: 437 KCHACIGGTNVREDIRQL 490
K GG +++D +L
Sbjct: 140 KVAVFFGGMAIKKDEERL 157
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV + SAT
Sbjct: 145 IGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSAT 204
Query: 691 MPDDVLEVSRCFMRD 735
P ++ + F+RD
Sbjct: 205 YPRNLDNLLSTFLRD 219
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/69 (36%), Positives = 43/69 (62%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
RD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A
Sbjct: 60 RDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGA 118
Query: 437 KCHACIGGT 463
+ +GG+
Sbjct: 119 RTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV + SAT
Sbjct: 145 IGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSAT 204
Query: 691 MPDDVLEVSRCFMRD 735
P ++ + F+RD
Sbjct: 205 YPRNLDNLLSTFLRD 219
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/69 (36%), Positives = 43/69 (62%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
RD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A
Sbjct: 60 RDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGA 118
Query: 437 KCHACIGGT 463
+ +GG+
Sbjct: 119 RTSVYVGGS 127
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/75 (36%), Positives = 39/75 (52%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
V TPGR+ D + + VLDEAD ML GF+ QI + + D Q ++ SAT
Sbjct: 257 VATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSAT 316
Query: 691 MPDDVLEVSRCFMRD 735
P +V ++ F +D
Sbjct: 317 WPKEVRALASDFQKD 331
Score = 54.4 bits (125), Expect = 8e-08
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVIALG 421
RD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC 226
Query: 422 DHLNAKCHACIGGTNVREDIRQLESGVHV 508
L K GG + R LE GV +
Sbjct: 227 HSLGLKMTCLFGGASKGPQARDLERGVDI 255
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 687
V TPGR+ + A + +++++ VLDEAD ML GF Q++ + L A+ Q +L SA
Sbjct: 202 VCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSA 261
Query: 688 TMPDDVLEVSRCFMRDPV 741
T +V ++ R DPV
Sbjct: 262 TQTRNVKDLCRVCTNDPV 279
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIALGDH 427
DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A+G H
Sbjct: 115 DVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAH 174
Query: 428 LNAKCHACIGGTNVREDIRQLESGVHV 508
C IGG++V + R SG+++
Sbjct: 175 HGFSCGLVIGGSDVAFE-RNRISGINI 200
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSA 687
VGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++ SA
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSA 225
Query: 688 TMPDDVLEVSRCFMRD 735
T+P ++ V + FM+D
Sbjct: 226 TLPKELRTVCKRFMQD 241
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 436
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 80 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGV 139
Query: 437 KCHACIGGTNVREDIRQL 490
K GG +++D +L
Sbjct: 140 KVAVFFGGMAIKKDEERL 157
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 54.4 bits (125), Expect = 8e-08
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQIQKV 406
RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEE 397
Query: 407 VIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
G L K + IGG + + +L GV V
Sbjct: 398 TNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEV 431
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 654
+ TPGR+ D++ R L N +LDEAD ML GF+ + V + +
Sbjct: 433 IATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM 480
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 436
+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG +
Sbjct: 82 KDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGL 141
Query: 437 KCHACIGGTNVREDIRQLESGVHV 508
+GG ++ L H+
Sbjct: 142 IAAVIVGGVDMAAQAMALARRPHI 165
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 511 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 687
V TPGR+ D + + + +K ++DEAD +L+ F+ ++ + K++ + + L SA
Sbjct: 167 VATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSA 226
Query: 688 TMPDDVLEVSRCFMRDP 738
TM V ++ R +RDP
Sbjct: 227 TMTKKVSKLERASLRDP 243
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
V TPG++ M + R + + V+DEAD +LS G+++++ + L Q ++ SAT
Sbjct: 151 VTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSAT 210
Query: 691 MPDDVLEVSRCFMRDPV 741
+ DD+ + + FM PV
Sbjct: 211 LKDDMTTLKKLFMTGPV 227
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 356 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
A+I+APT+EL QI K+ + L L + N E+ LE HV
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHV 149
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
V TPG++ M + R + + V+DEAD +LS G+++++ + L Q ++ SAT
Sbjct: 218 VTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSAT 277
Query: 691 MPDDVLEVSRCFMRDPV 741
+ DD+ + + FM PV
Sbjct: 278 LKDDMTTLKKLFMTGPV 294
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIA 415
++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI K+ +
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLFVK 185
Query: 416 LGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
L L + N E+ LE HV
Sbjct: 186 LSQALPFLQAINLCDINEEENSVWLEDRSHV 216
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 108 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQD 257
P + D++ +TF D L E +L+ I G+EK + +Q+ I +++
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALEN 126
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 436
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 79 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGV 138
Query: 437 KCHACIGGTNVREDIRQL 490
K GG +++D +L
Sbjct: 139 KVAVFFGGMAIKKDEERL 156
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
VGTPGR+ + L + +K FVLDE D+M+ G D DV ++ QV++ SAT
Sbjct: 165 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI--GDADMRRDVQEI----KQVMMFSAT 218
Query: 691 MPDDVLEVSRCFMRDPV 741
+P ++ V + FM+DP+
Sbjct: 219 LPKELRTVCKRFMQDPM 235
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +1
Query: 511 VGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 681
V TPGR+ D++ + + + VLDEAD M +GF+ QI V + D Q +L
Sbjct: 432 VCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLF 491
Query: 682 SATMPDDVLEVSRCFMRDPV 741
SAT P + ++R + PV
Sbjct: 492 SATFPRHMEALARKVLDKPV 511
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALG 421
RDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFA 401
Query: 422 DHLNAKCHACIGGTNVREDIRQLESGVHV 508
L K GG + E I L+ G +
Sbjct: 402 KPLGLKVACTYGGVGISEQIADLKRGAEI 430
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIALGDH 427
+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V L
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTF 245
Query: 428 LNAKCHACIGGTNVREDIRQLESGVHV 508
+ + C GG +++ L SG V
Sbjct: 246 IQLEVCLCAGGLDLKAQEAALRSGPDV 272
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/66 (31%), Positives = 42/66 (63%)
Frame = +1
Query: 544 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 723
+R+ ++ VLDEAD ML F+DQ++++ ++ + + Q +L SATM +++ E++
Sbjct: 310 SRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASM 369
Query: 724 FMRDPV 741
++ PV
Sbjct: 370 SLQKPV 375
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 45 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 218
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 219 AIQQRAI 239
IQQ I
Sbjct: 173 PIQQACI 179
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +1
Query: 493 EWCSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 672
E V TPGR+ D++ A + V DEAD M GF+ Q+ + + D Q
Sbjct: 388 EGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQC 447
Query: 673 ILLSATMPDDVLEVSRCFMRDPV 741
++ SAT V ++R + DPV
Sbjct: 448 LMFSATFKQKVERLARDALVDPV 470
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 397
RDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 CSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF---KMLSADVQ 669
C + TPGR+ D++ + + + VLDEAD ML GF+ QI + +M S + +
Sbjct: 302 CHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEER 361
Query: 670 V-ILLSATMPDDVLEVSRCFMRD 735
+ + SAT P ++ +++ F+++
Sbjct: 362 ITAMFSATFPKEIQLLAQDFLKE 384
Score = 35.5 bits (78), Expect = 0.042
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Frame = +2
Query: 242 ALHPRRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAP 373
AL RD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+P
Sbjct: 199 ALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSP 258
Query: 374 TRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHV 508
TREL+ QI GG N ++ I +L G H+
Sbjct: 259 TRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHI 304
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 430
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 431 NAKCHACIGGTNVREDIRQLES 496
N GG V ++I+ ++
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKN 129
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +1
Query: 511 VGTPGRVYDMI----TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 678
V TPGR++ +I T A T++L V+DEAD F+D + ++ + + L
Sbjct: 136 VATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGL 195
Query: 679 LSAT 690
SAT
Sbjct: 196 FSAT 199
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQVI 675
VGT GR+ + + + FVLDEAD M+ + GF I + S + Q +
Sbjct: 473 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTL 532
Query: 676 LLSATMPDDVLEVSRCFMRD 735
+ SAT PD V E +R F+R+
Sbjct: 533 MFSATFPDSVQEAARAFLRE 552
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 397
+H D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 398 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
+ GG V + Q+E G +
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATI 471
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQVI 675
VGT GR+ + + + FVLDEAD M+ + GF I + S + Q +
Sbjct: 473 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTL 532
Query: 676 LLSATMPDDVLEVSRCFMRD 735
+ SAT PD V E +R F+R+
Sbjct: 533 MFSATFPDSVQEAARAFLRE 552
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 397
+H D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 398 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
+ GG V + Q+E G +
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATI 471
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 690
+ TPGR+ D+ + ++ VLDEAD ML GF+ I + + D V L SAT
Sbjct: 217 IATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSAT 276
Query: 691 MPDDVLEVSRCFMRDPV 741
P+ V +++ + ++ V
Sbjct: 277 WPEGVRKLTDKYTKEAV 293
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQIQK 403
+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQQI+
Sbjct: 122 QDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEG 181
Query: 404 VVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHV 508
V N C+ GG + E + GV +
Sbjct: 182 EVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEI 215
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQVI 675
VGT GR+ + + + FVLDEAD M+ + GF I + S + Q +
Sbjct: 473 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTL 532
Query: 676 LLSATMPDDVLEVSRCFMRD 735
+ SAT PD V E +R F+R+
Sbjct: 533 MFSATFPDSVQEAARAFLRE 552
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 397
+H D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 398 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
+ GG V + Q+E G +
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATI 471
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 391
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 392 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHV 508
QI K N + GG N R+ + +L +G H+
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHI 276
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVILL 681
+ TPGR+ D+I + + + VLDEAD ML GF+ QI + +
Sbjct: 278 IATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMF 337
Query: 682 SATMPDDVLEVSRCFMRD 735
SAT P ++ +++ F++D
Sbjct: 338 SATFPKEIQVLAKDFLKD 355
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 391
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 392 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHV 508
QI K N + GG N R+ + +L +G H+
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHI 260
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVILL 681
+ TPGR+ D+I + + + VLDEAD ML GF+ QI + +
Sbjct: 262 IATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMF 321
Query: 682 SATMPDDVLEVSRCFMRD 735
SAT P ++ +++ F++D
Sbjct: 322 SATFPKEIQVLAKDFLKD 339
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 391
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 392 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHV 508
QI K N + GG N R+ + +L +G H+
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHI 257
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVILL 681
+ TPGR+ D+I + + + VLDEAD ML GF+ QI + +
Sbjct: 259 IATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMF 318
Query: 682 SATMPDDVLEVSRCFMRD 735
SAT P ++ +++ F++D
Sbjct: 319 SATFPKEIQVLAKDFLKD 336
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Frame = +2
Query: 242 ALHPRRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELA 388
A+ R+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL
Sbjct: 22 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 81
Query: 389 QQIQKVVIALGDHLNAKCHACIGG 460
QI K + AL + +GG
Sbjct: 82 IQIMKHINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Frame = +2
Query: 242 ALHPRRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELA 388
A+ R+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL
Sbjct: 189 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 248
Query: 389 QQIQKVVIALGDHLNAKCHACIGG 460
QI K + AL + +GG
Sbjct: 249 IQIMKHINALISTTQLIATSIVGG 272
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +1
Query: 499 CSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV--FKMLSAD-- 663
C+ VGT GRV A+ + + VLDEAD M+ S GF +I + +K + +
Sbjct: 426 CTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDK 485
Query: 664 VQVILLSATMPDDVLEVSRCFMRD 735
Q ++ SAT P V E +R +R+
Sbjct: 486 RQTMMFSATFPSSVQEAARKLLRE 509
Score = 37.5 bits (83), Expect = 0.010
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKVV 409
+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 410 IALGDHLNAKCHACIGGTNVREDIRQLESG 499
+ GG NV + Q+ G
Sbjct: 396 RKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +1
Query: 499 CSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV--FKMLSAD-- 663
C+ VGT GRV A+ + + VLDEAD M+ S GF +I + +K + +
Sbjct: 426 CTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDK 485
Query: 664 VQVILLSATMPDDVLEVSRCFMRD 735
Q ++ SAT P V E +R +R+
Sbjct: 486 RQTMMFSATFPSSVQEAARKLLRE 509
Score = 37.5 bits (83), Expect = 0.010
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKVV 409
+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 410 IALGDHLNAKCHACIGGTNVREDIRQLESG 499
+ GG NV + Q+ G
Sbjct: 396 RKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQVI 675
VGT GR+ + + + FVLDEAD M+ + GF I + S + Q +
Sbjct: 684 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTL 743
Query: 676 LLSATMPDDVLEVSRCFMRD 735
+ SAT PD V E +R +++
Sbjct: 744 MFSATFPDSVQEAARNHLKE 763
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 397
+H D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 398 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
+ GG V + Q+E G +
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATI 682
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQVI 675
VGT GR+ + + + FVLDEAD M+ + GF I + S + Q +
Sbjct: 684 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTL 743
Query: 676 LLSATMPDDVLEVSRCFMRD 735
+ SAT PD V E +R +++
Sbjct: 744 MFSATFPDSVQEAARNHLKE 763
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 397
+H D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 398 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
+ GG V + Q+E G +
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATI 682
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGD 424
+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+ L +
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLE 165
Query: 425 HLNAKCHACIGGTNVREDIRQLESGVHV 508
N +GG+N + +L GV +
Sbjct: 166 GSNLTYGLVMGGSNRSAEKDKLAKGVSI 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 502 SCXVGTPGRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 675
S V TPGR+ D + T L N +K ++DEAD +L GF+ ++ V + L Q +
Sbjct: 192 SILVATPGRLLDHLQNTDNFLVRN-MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSM 250
Query: 676 LLSATMPDDVLEV 714
L SAT V E+
Sbjct: 251 LFSATHSPKVDEL 263
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQVI 675
VGT GR+ + + + FVLDEAD M+ + GF I + S + Q +
Sbjct: 684 VGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTL 743
Query: 676 LLSATMPDDVLEVSRCFMRD 735
+ SAT PD V E +R +++
Sbjct: 744 MFSATFPDSVQEAARNHLKE 763
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Frame = +2
Query: 245 LHPRRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 397
+H D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 398 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
+ GG V + Q+E G +
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATI 682
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 10/60 (16%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVV 409
DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI + +
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
Score = 34.7 bits (76), Expect = 0.073
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Frame = +1
Query: 499 CSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV--------FKML 654
C +GT GR+ D + + ++ V DEAD +L KD + + F
Sbjct: 510 CDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIKDAGFMES 569
Query: 655 SADVQVILLSATMPDDVLEVSRCFMR 732
+A Q I+ SAT V+ V+ M+
Sbjct: 570 AATRQTIMTSATFNASVMTVANELMK 595
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 499 CSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS--RGFKDQIHDVFKML 654
C VGTP RV+D+I L ++ V+DE D+ L+ QI +F++L
Sbjct: 335 CDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFLAGKNNCAHQIESIFRVL 388
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQKVV 409
DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTA 834
Query: 410 IALGDHLNAKCHACIGGTNVREDIRQLES 496
L KC GG + +++ L S
Sbjct: 835 RQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADV-QVILLS 684
V T GR+ D + + + +K VLDEAD M+ S F +++ + Q +L S
Sbjct: 871 VATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFS 930
Query: 685 ATMPDDV 705
A+ +D+
Sbjct: 931 ASFSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQKVV 409
DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTA 834
Query: 410 IALGDHLNAKCHACIGGTNVREDIRQLES 496
L KC GG + +++ L S
Sbjct: 835 RQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 511 VGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADV-QVILLS 684
V T GR+ D + + + +K VLDEAD M+ S F +++ + Q +L S
Sbjct: 871 VATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFS 930
Query: 685 ATMPDDV 705
A+ +D+
Sbjct: 931 ASFSEDL 937
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 10/57 (17%)
Frame = +2
Query: 254 RRDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 394
RR+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 163 RRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.5 bits (78), Expect = 0.042
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 257 RDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIALGDHLN 433
RDV A +G+GKT + + +L + + + QA+IL P + L QI D
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 434 -AKCHACIGGTNVREDIRQLES 496
AK + G + ++ RQL S
Sbjct: 217 VAKVVSLSGANDFEKEARQLAS 238
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 254 RRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 433
R+ V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + +
Sbjct: 82 RKLVCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMG 138
Query: 434 AKCHA-CIGGTNVREDI 481
K H + TN D+
Sbjct: 139 IKVHEHALMDTNEYRDV 155
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 506 HEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 420
HEHH G++ HG H H HG HS H
Sbjct: 637 HEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 105 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 7
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 478 YSPTGEWCSCXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKML 654
Y T + C T G++ I + + + +K+ +LDE+D+M+ F + I V L
Sbjct: 216 YQFTKDQCDIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQL 275
Query: 655 SADV 666
DV
Sbjct: 276 QEDV 279
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 260 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 397
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 263 VIAQAQSGTGKTATFSISILQQIDTSIREC 352
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 75 DPSMAHFWNPLANLLTFFQTNKT 7
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 18 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 158
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.9 bits (59), Expect = 8.4
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Frame = +2
Query: 236 NNALHPRRDVIAQAQSGTG----KTATF---SISILQQIDTSIRECQALILAPTRELAQQ 394
+NAL R + + G G TAT S+ +L++ + IRE Q +LA ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071
Query: 395 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
QK + A + + K A I Q +S +HV
Sbjct: 1072 -QKAIDAQEEEIQTKWAAL-----QARSIEQQQSPMHV 1103
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 8.4
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Frame = +2
Query: 236 NNALHPRRDVIAQAQSGTG----KTATF---SISILQQIDTSIRECQALILAPTRELAQQ 394
+NAL R + + G G TAT S+ +L++ + IRE Q +LA ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071
Query: 395 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 508
QK + A + + K A I Q +S +HV
Sbjct: 1072 -QKAIDAQEEEIQTKWAAL-----QARSIEQQQSPMHV 1103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,304,621
Number of Sequences: 27780
Number of extensions: 439357
Number of successful extensions: 1331
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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