Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0069
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.88 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.5  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   3.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.7  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   6.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = +1

Query: 49   AIKEIKHMS----DSIISNSCYAQITMVPFVLLFNLVILKLTPKSGNL 180
            A+KE K M+    D+  S   +   T +PFV  FN  ++KLT  SG +
Sbjct: 907  AVKEGKFMNVNMLDTYESVHSFPTETGLPFVYTFN--VIKLTKTSGTV 952


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -1

Query: 354 HCKRTVFFFFYYCFDEISIGTRFCDDRFYELMFNEFIIPISK 229
           H  RT+FF     F E ++ T    D+       ++ +PI +
Sbjct: 386 HDDRTLFFHPMSSFREFAVSTSILGDKKTAEENTDYFMPIGR 427


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 52  IKEIKHMSDSIISNSCYAQITMVPFVLLFNLVILKLTPKSGN 177
           I  +K     I++    A I+ +PF +   + +++  P+SGN
Sbjct: 152 ISGLKRPIRFILAAWLIALISAIPFAIYTKVNLVEYPPESGN 193


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 122 GTIVICA*QLLDIIESDMCLISLIALKE 39
           GT+  C   L    E D CL++  ALK+
Sbjct: 433 GTLQRCLLSLEKTYERDTCLLASDALKQ 460


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 122 GTIVICA*QLLDIIESDMCLISLIALKE 39
           GT+  C   L    E D CL++  ALK+
Sbjct: 471 GTLQRCLLSLEKTYERDTCLLASDALKQ 498


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 520 YKFYFIKTKRKQWNNYDIKIYQNVFHL 440
           Y +         +NNY+ K+Y N+ ++
Sbjct: 89  YNYSNYNNYNNNYNNYNKKLYYNINYI 115


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 324 YYCFDEISIGTRFCDDRFYELM 259
           YY F   S G R C  R Y ++
Sbjct: 475 YYAFVPFSAGPRSCVGRKYAML 496


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,172
Number of Sequences: 438
Number of extensions: 3818
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)