BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0068
(718 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative odorant-b... 25 2.3
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 24 4.1
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 24 5.4
>AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative
odorant-binding protein OBPjj11 protein.
Length = 135
Score = 25.0 bits (52), Expect = 2.3
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 221 GFVSCAIGTILSTAVQRSAQNWHGQGESDCLI-KTKHCDGPRGC*RNVISAQC 376
GFV G++ + + + + +GQ ++D L+ + ++ DGP C R+ QC
Sbjct: 74 GFVD-QDGSVQTDELTQKLASEYGQEKADELVARCRNNDGPDACERSFRLLQC 125
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 24.2 bits (50), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 449 SQMPRHLISDAHEWINEIPTSLSTI*RN 532
S + RHL+SD + N P ++ + RN
Sbjct: 1002 STIARHLLSDQSDPFNRSPLTMEQVKRN 1029
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.8 bits (49), Expect = 5.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -3
Query: 464 DEAFGYLKRVIVTPAVYPRLLEFLHV-DIQSTGQKSHC 354
D +F L RV TPA P +EFL + D + HC
Sbjct: 635 DASFNRLTRV--TPATIPNSIEFLFLNDNHIVHVEPHC 670
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,443
Number of Sequences: 2352
Number of extensions: 13532
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -