Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0067
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 72 1e-13
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 54 3e-08
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 52 1e-07
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 45 1e-05
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 45 1e-05
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc... 45 1e-05
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 45 1e-05
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 44 3e-05
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 43 5e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 2e-04
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 39 7e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 38 0.002
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 34 0.025
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 34 0.025
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 33 0.058
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 32 0.10
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 31 0.18
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 30 0.31
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 30 0.31
SPBC18A7.02c |||seven transmembrane receptor-like protein|Schizo... 29 0.54
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.54
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.71
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 2.2
SPAC1F7.13c |rpl801|rpl8-1, rpl18, rpk5a, rpl2-1, SPAC21E11.02c|... 27 2.9
SPBC2F12.07c |rpl802|rpl8-2, rpk37, rpk5b|60S ribosomal protein ... 27 2.9
SPBC839.04 |rpl803|rpl8-3, rpk5-b, rpkD4|60S ribosomal protein L... 27 2.9
SPAC18G6.12c |||hypothetical protein|Schizosaccharomyces pombe|c... 27 3.8
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 5.0
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 26 5.0
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 26 6.6
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 26 6.6
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 71.7 bits (168), Expect = 1e-13
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG AG EV ++PLD+VKTR+Q+ KS Y+G DC+KK+ + EG +
Sbjct: 14 AGAVAGISEVLTLYPLDVVKTRMQLSVGKSD--------YNGTFDCLKKIVKNEGPHRLY 65
Query: 214 KGILPPILAETPKRLLNLQLSNNTRSFL 297
+GILPPIL E PKR L SN+T S L
Sbjct: 66 RGILPPILMEAPKRALKF-ASNDTYSKL 92
Score = 44.0 bits (99), Expect = 2e-05
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +3
Query: 246 P*KAVKFATFEQYKKLF--MFGSDTPTPLTFSLAGLGAGITEAVLVNPFEVVKVTLQSNK 419
P +A+KFA+ + Y KL+ +F +P L G AG TE +V PFE++K+ LQ K
Sbjct: 77 PKRALKFASNDTYSKLWRKVFKRKDSSPALSILTGSCAGFTETFVVVPFELMKIRLQDVK 136
Query: 420 SLATEIPSTWSVTRQIVRE 476
+ A++ T +IV++
Sbjct: 137 N-ASKYNGTVDCFTKIVKQ 154
Score = 39.5 bits (88), Expect = 5e-04
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1
Query: 19 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 198
A+ I G AGF E ++ P +L+K RLQ N S Y+G +DC K+ + E
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK--------YNGTVDCFTKIVKQER 156
Query: 199 FTSFWKG 219
+ + G
Sbjct: 157 ILALYNG 163
Score = 36.3 bits (80), Expect = 0.005
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG G + P D++K+R+Q + P Y+ + + R EGFT+ +
Sbjct: 205 AGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPK----YNWAYPALVTVAREEGFTALY 260
Query: 214 KGILPPILAETPKRLLNLQLSNNTRSF 294
KG +P +L P + L + N+ F
Sbjct: 261 KGFVPKVLRLGPGGGILLVVFNSVIEF 287
Score = 34.3 bits (75), Expect = 0.019
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 315 PTPLTFSLAGLGAGITEAVLVNPFEVVKVTLQSNKSLATEIPSTWSVTRQIVREHG 482
P P+TF+ AG AGI+E + + P +VVK +Q + ++ T+ ++IV+ G
Sbjct: 7 PFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG-KSDYNGTFDCLKKIVKNEG 60
Score = 30.7 bits (66), Expect = 0.23
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 336 LAGLGAGITEAVLVNPFEVVKVTLQSNKSLATEIPS-TWSVTRQIVREHGLGSRGLNKG* 512
+AG GI L PF+V+K +Q+ +A ++P W+ + G L KG
Sbjct: 204 IAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGF 263
Query: 513 QPR 521
P+
Sbjct: 264 VPK 266
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 53.6 bits (123), Expect = 3e-08
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG S G +V + P D VK RLQ QSN S + Y+ +DC+KK+ + EG +F+
Sbjct: 23 AGVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-------YNNALDCVKKISKNEGLAAFY 75
Query: 214 KGILPPIL 237
KG + P+L
Sbjct: 76 KGTVLPLL 83
Score = 35.5 bits (78), Expect = 0.008
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+G +G ++ P++ V+ RLQIQ+ K+ + Y G DC+KK+ G +
Sbjct: 118 SGAISGLANSFLVGPVEHVRIRLQIQTGKNVL-------YHGPWDCIKKISSQYGLSGIM 170
Query: 214 KGILPPILAE 243
KG P E
Sbjct: 171 KGYNPTAARE 180
Score = 34.7 bits (76), Expect = 0.014
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 336 LAGLGAGITEAVLVNPFEVVKVTLQSNKSLATEIPSTWSVTRQIVREHGLGS 491
LAG+ G+ + ++ PF+ VKV LQS +++ + ++I + GL +
Sbjct: 22 LAGVSGGVAQVLVGQPFDCVKVRLQSQSNVSPIYNNALDCVKKISKNEGLAA 73
Score = 33.5 bits (73), Expect = 0.033
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
G AG+ +P D+VK+++Q S Y C K +Y G F++
Sbjct: 219 GAGAGYAMWLAAYPFDIVKSKIQTDGFLSKAT------YKNSWQCAKGIYTKAGLRGFYR 272
Query: 217 GILPPILAETP 249
G +P ++ P
Sbjct: 273 GFVPVLVRAAP 283
Score = 28.7 bits (61), Expect = 0.94
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 342 GLGAGITEAVLVNPFEVVKVTLQSNKSLA-TEIPSTWSVTRQIVREHGLGSRGLNKG*QP 518
G GAG + PF++VK +Q++ L+ ++W + I + GL RG +G P
Sbjct: 219 GAGAGYAMWLAAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGL--RGFYRGFVP 276
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 51.6 bits (118), Expect = 1e-07
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
G +G I+ PL++++TRLQ Q + P Y G IDC K + EGF +K
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSA-----HPATYDGFIDCFYKTTKNEGFRGLYK 396
Query: 217 GILPPILAETPKRLLNLQLSNNTRSFL 297
G+ P +L P ++ + N + +L
Sbjct: 397 GLSPNLLKVAPSVAISYLVYENCKKWL 423
Score = 36.7 bits (81), Expect = 0.004
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AGG AG V ++P+D +K R+Q H S I+ K++Y+ G ++
Sbjct: 234 AGGMAGSVAQMFIYPVDTLKFRIQCSDLSRGQ-----HGKSIILSNAKELYKSVGIRGYY 288
Query: 214 KGILPPILAETP 249
+G+L IL P
Sbjct: 289 RGVLVGILGMFP 300
Score = 30.3 bits (65), Expect = 0.31
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+GG AG V PLD +K L + + KPS + ++ ++ K ++ G SF+
Sbjct: 133 SGGIAGIVSRTCTAPLDRLKVML---ISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFF 189
Query: 214 KG 219
G
Sbjct: 190 VG 191
Score = 30.3 bits (65), Expect = 0.31
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 246 P*KAVKFATFEQYKKLFMFGSDTP--TPLTFSLAGLGAGITEAVLVNPFEVVKVTLQ 410
P ++KF T+E K++ S + +PL LAG AG + + P + +K +Q
Sbjct: 201 PESSIKFGTYEAMKRVLGISSSSENHSPLYSYLAGGMAGSVAQMFIYPVDTLKFRIQ 257
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 45.2 bits (102), Expect = 1e-05
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +1
Query: 10 KQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYR 189
K A + +GG+AG + ++ LD +TRL KSA K + ++G++D +K YR
Sbjct: 130 KWFAGNLASGGAAGAASLLFVYSLDYARTRL-ANDAKSAKKGGE-RQFNGLVDVYRKTYR 187
Query: 190 YEGFTSFWKGILPPIL 237
+G ++G P ++
Sbjct: 188 SDGLRGLYRGFGPSVV 203
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
GG + V P++ VK +Q Q ++ H Y GI +C K+ EG S W+
Sbjct: 34 GGVSAAVSKTAAAPIERVKLLIQNQ-DEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWR 92
Query: 217 GILPPILAETPKRLLN 264
G +L P + LN
Sbjct: 93 GNTANVLRYFPTQALN 108
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 45.2 bits (102), Expect = 1e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+GG +G + + PLD+VKT LQ + + S + G +D ++ +Y Y G SF+
Sbjct: 210 SGGLSGAIASSLTTPLDVVKTLLQTRGSSSI---PEVRKCKGSLDVVRFIYNYGGIPSFF 266
Query: 214 KGILPPILAETP 249
KGI P ++ P
Sbjct: 267 KGIRPRMVVAMP 278
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG +G +E +M+P+D +KTR+Q+ + S + I++ + K+ EG S W
Sbjct: 25 AGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN------IVNSVIKISSTEGVYSLW 78
Query: 214 KGILPPILAETPKRLL 261
+GI I+ P +
Sbjct: 79 RGISSVIMGAGPSHAI 94
Score = 31.1 bits (67), Expect = 0.18
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = +3
Query: 222 SASYIGRNP*KAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEAVLVNPFEVVKV 401
S+ +G P A+ F+ E +K D P L +LAG A + PF+V+K
Sbjct: 82 SSVIMGAGPSHAIYFSVLEFFKSKINASPDRP--LASALAGACAITISDAFMTPFDVIKQ 139
Query: 402 TLQSNKSLATEIPSTWSVTRQIVREHGLGS 491
+Q + + S + R GLG+
Sbjct: 140 RMQLP---SRKYKSALHCATTVFRNEGLGA 166
Score = 30.7 bits (66), Expect = 0.23
Identities = 22/88 (25%), Positives = 35/88 (39%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG A + M P D++K R+Q+ S K Y + C ++R EG +F+
Sbjct: 119 AGACAITISDAFMTPFDVIKQRMQLPSRK----------YKSALHCATTVFRNEGLGAFY 168
Query: 214 KGILPPILAETPKRLLNLQLSNNTRSFL 297
I P + + + SFL
Sbjct: 169 ISYPTCIAMSIPFTAIQVATYDTCMSFL 196
>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 300
Score = 44.8 bits (101), Expect = 1e-05
Identities = 30/87 (34%), Positives = 46/87 (52%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG SA + + PLD++KTR+Q NK+ P SG +K M ++EG TSF+
Sbjct: 220 AGASASLI---VSAPLDVIKTRIQ---NKNFDNPQ-----SGFT-ILKNMLKFEGPTSFF 267
Query: 214 KGILPPILAETPKRLLNLQLSNNTRSF 294
KG+ P +L PK + + ++ F
Sbjct: 268 KGLTPKLLTTGPKLVFSFTMAQTLIPF 294
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 13 QAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNK 120
Q A +G+ SAG +E+ + HP+D + RL K
Sbjct: 12 QTARIVGSA-SAGILELSLFHPVDTISKRLMSNHGK 46
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 44.8 bits (101), Expect = 1e-05
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 222 SASYIGRNP*KAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEAVLV-NPFEVVK 398
S +G + AV+F F+ KK T LAGLGAG+ E+VLV PFE +K
Sbjct: 70 STVIVGNSLKAAVRFFAFDSIKKSLSDEHGHLTGPRTVLAGLGAGVAESVLVLTPFESIK 129
Query: 399 VT-LQSNKSLATEIPSTWSVTRQIVREHGLGSRGLNKG 509
+ K + +R IV E+G+ RGL +G
Sbjct: 130 TAIIDDRKRPNPRLKGFLQASRIIVHENGI--RGLYRG 165
Score = 36.7 bits (81), Expect = 0.004
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSN----KSAMKPSDPHYYSG-----IIDCMKKMY 186
AGG AG +E+ I +P + KTRLQ+ N K+ + P +Y G + + +K
Sbjct: 23 AGGVAGAIEISITYPAEFAKTRLQLYRNVEGTKAKLPPFGLEWYRGCSTVIVGNSLKAAV 82
Query: 187 RYEGFTSFWKGI 222
R+ F S K +
Sbjct: 83 RFFAFDSIKKSL 94
Score = 35.9 bits (79), Expect = 0.006
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
G AG + V P+D VK+R+Q + SA K Y I C K+ +G FW
Sbjct: 210 GSVAGIITVYCTQPIDTVKSRMQ---SLSASKE-----YKNSIHCAYKILTQDGLLRFWS 261
Query: 217 GILP 228
G P
Sbjct: 262 GATP 265
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 43.6 bits (98), Expect = 3e-05
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 KLLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKK 180
KL +++ + AG GF+ + PLDL+KTR Q QS + ++ P II
Sbjct: 9 KLGVKSSKHLAAGALGGFISSTTLQPLDLLKTRCQ-QSQRDSL----PKMVRRII----- 58
Query: 181 MYRYEGFTSFWKGILPPILAETPKRLLNLQLSNNTRSFL-CSDQILLRHLRFLW 339
G S WKG LP IL T N R F S I H++ LW
Sbjct: 59 -LHEGGVFSLWKGTLPSILRSTTGSSCYFYFLNWLRHFAPQSKNIASSHIQNLW 111
Score = 35.5 bits (78), Expect = 0.008
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +1
Query: 22 MQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGF 201
+ + +G +G I +P D++KTR+Q++ PH Y + K +Y EGF
Sbjct: 212 VNVMSGLISGATATAITNPFDMLKTRVQLE----------PHIYKNFLHSAKLVYANEGF 261
Query: 202 TSFWKGILPPILAET 246
F G +L ++
Sbjct: 262 RGFLDGFFLRVLRKS 276
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 42.7 bits (96), Expect = 5e-05
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQ-SNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSF 210
AGG+AG ++ PLD+VKTR Q Q + S + G + M+ ++ EG
Sbjct: 11 AGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGL 70
Query: 211 WKGILPPILAETP 249
++G+ P +L P
Sbjct: 71 YRGVGPMMLGYLP 83
Score = 34.3 bits (75), Expect = 0.019
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 151 YSGIIDCMKKMYRYEGFTSFWKGILPPI 234
Y+ D +K+Y+YEG +F++G+ P +
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 333 SLAGLGAGITEAVLVNPFEVVKVTLQSNKS 422
++AG AG+ +++V P +VVK Q+ K+
Sbjct: 9 AIAGGAAGLASSLVVAPLDVVKTRKQAQKA 38
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 41.1 bits (92), Expect = 2e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 10 KQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYR 189
+ + + + A AG + +P+ LVKTRLQ+ K Y IDC+ K R
Sbjct: 160 ENSQIHLMAAAIAGVITSAATNPIWLVKTRLQLDK-----KSGQAAQYRSSIDCIIKTIR 214
Query: 190 YEGFTSFWKGILPPIL 237
EGF +KG+ +L
Sbjct: 215 LEGFRGLYKGLSASLL 230
Score = 37.5 bits (83), Expect = 0.002
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQ--------IQSNKSAMKPSDPHYYSGIIDC--MKKM 183
AGG AG + PLD+VKTRLQ ++ + P Y + C +K +
Sbjct: 54 AGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNV 113
Query: 184 YRYEGFTSFWKGILPPILAETPKRLLNLQLSNNTRSFL 297
+EG + ++G+ P ++ P R +N N + L
Sbjct: 114 KVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRIL 151
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 25 QIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFT 204
++G G A F+ I +P ++V+TRL+ QS P Y+G+I C K ++ +G
Sbjct: 275 KLGGAGIAKFMAAGIAYPHEVVRTRLR-QSPSINGTPK----YTGLIQCFKLVWMEQGIV 329
Query: 205 SFWKGILPPILAETP 249
+ G+ +L P
Sbjct: 330 GLYGGLTAHLLRVVP 344
Score = 31.1 bits (67), Expect = 0.18
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 315 PTPLTFSLAGLGAGITEAVLVNPFEVVKVTLQSN 416
P PL+ +AG AG+ A+ P +VVK LQS+
Sbjct: 46 PPPLSHFIAGGVAGMLGAIATAPLDVVKTRLQSD 79
Score = 29.9 bits (64), Expect = 0.41
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +3
Query: 234 IGRNP*KAVKFATFEQYKKLF--MFGSDTPTPLTFSLAGLGAGITEAVLVNPFEVVKVTL 407
IG P +++ F ++ K++ +F + +A AG+ + NP +VK L
Sbjct: 131 IGTIPARSINFFSYGNGKRILADLFNNGQENSQIHLMAAAIAGVITSAATNPIWLVKTRL 190
Query: 408 QSNKSLATEIPSTWSVTRQIVREHGLGSRGLNKG 509
Q +K S+ I G RGL KG
Sbjct: 191 QLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKG 224
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 39.1 bits (87), Expect = 7e-04
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQ--IQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG-FT 204
AGG G +MH LD VKTR Q + +NK Y+G++ C + EG F
Sbjct: 21 AGGIGGATADFLMHSLDTVKTRQQAALYTNK----------YNGMVKCYSTILCEEGVFH 70
Query: 205 SFWKGILPPILAETPKRLLNLQLSNNTRSFLCSDQILLRHLRFL 336
+ G+ P ++ P L T+ L S+ L L FL
Sbjct: 71 GLYSGVCPMLIGSLPATALFFSSYEYTKRHLMSNYNLPETLCFL 114
Score = 31.9 bits (69), Expect = 0.10
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 76 PLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETP 249
P +++KTRLQ+Q + + Y +K++ + EG +F+ G IL + P
Sbjct: 130 PSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIP 187
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = +1
Query: 4 LLKQAAMQ-IGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKK 180
LL++ ++ + A +GF C M D V TR+ Q NK Y IDC+ K
Sbjct: 224 LLEEGMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQKNKEL--------YKNPIDCILK 275
Query: 181 MYRYEGFTSFWKGILPPILAETPKRLLNLQLSNNTRSFLCSDQ 309
R EGF + +KG + P + L T Q
Sbjct: 276 TIRSEGFFALYKGFGAHLARIAPHTIFCLTFVEQTNKLFLKFQ 318
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+GG A V + +P +++KTR Q+Q + + PS Y + + R+EG
Sbjct: 29 SGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPS-KRIYKSVGQAFSLIARHEGIRGLQ 87
Query: 214 KGI 222
+G+
Sbjct: 88 RGL 90
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/87 (22%), Positives = 34/87 (39%)
Frame = +1
Query: 19 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 198
A+ + +G +G P LVKTR+Q S K + + Y I + ++ + G
Sbjct: 129 AINVASGAGSGLCGALFGSPFFLVKTRMQSYSPKFPV--GQQYGYKHIFNAFSRIIKENG 186
Query: 199 FTSFWKGILPPILAETPKRLLNLQLSN 279
+ G IL + L + N
Sbjct: 187 VKGLFVGADAAILRTVSGSSVQLPIYN 213
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +3
Query: 321 PLTFSLAGLGAGITEAVLVNPFEVVKVTLQSNKSLATEIPSTWSVTRQIVREHGL----- 485
P++ L+G A L NPFEV+K Q L T++ + + + + + L
Sbjct: 23 PVSGFLSGGLAACGAVTLTNPFEVIKTRFQLQGQL-TKLDPSKRIYKSVGQAFSLIARHE 81
Query: 486 GSRGLNKG 509
G RGL +G
Sbjct: 82 GIRGLQRG 89
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 33.9 bits (74), Expect = 0.025
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +1
Query: 55 VEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYS----GIIDCMKKMYRYEGFTSFWKGI 222
V I PLD+VKTR Q+ + SAM+ ++ + GI++ K ++ G F +G+
Sbjct: 186 VATTISTPLDIVKTRYQV-ATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVKGFTRGL 244
Query: 223 LPPILAETPKRLLNLQLSNNTRS 291
+ P ++++ + + +S
Sbjct: 245 FTRMCYIMPSGMISMSVFESFKS 267
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 33.9 bits (74), Expect = 0.025
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1
Query: 70 MHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETP 249
M+PL +++TRLQ+ + PH I++ + + +R +G F+KG LP +L P
Sbjct: 204 MYPLLVIRTRLQVMRS--------PH--RSIMNLVLQTWRLQGILGFYKGFLPHLLRVVP 253
Query: 250 K 252
+
Sbjct: 254 Q 254
Score = 32.3 bits (70), Expect = 0.076
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSA 126
AG +AG IMHPLDL K ++Q N+ +
Sbjct: 6 AGLAAGTASTLIMHPLDLAKIQMQASMNQDS 36
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 32.7 bits (71), Expect = 0.058
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Frame = +1
Query: 76 PLDLVKTRLQIQS--NKSAMKPSD-----------PHYYSGIIDCMKKMYRYEGFTSFWK 216
PLD+VKTRLQ +S S+ +P P G + + ++ R+EG S W+
Sbjct: 44 PLDVVKTRLQSESISQYSSTQPISSAKILGKGRPAPKPLGGPVSGLYQIARHEGVRSLWR 103
Query: 217 GILPPILAETPKRLLNLQLSNNTRSFLCSDQIL 315
G++P L + L NT FL +Q+L
Sbjct: 104 GLVPS---------LTMLLPANTVQFLGYEQLL 127
Score = 29.5 bits (63), Expect = 0.54
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 246 P*KAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEAVLVNPFEVVKVTLQS 413
P V+F +EQ L+ SD P ++AG A A +V+P E+ + +Q+
Sbjct: 114 PANTVQFLGYEQLLPLY---SDWGFPAAAAIAGASARTISATIVSPIELFRTRVQA 166
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 31.9 bits (69), Expect = 0.10
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+G AG + + P D+VKTR+ + + + +K + +EGF + +
Sbjct: 264 SGSIAGGIAAALTTPFDVVKTRIMTSQQRLSY-----------VFTIKSIVAHEGFLALY 312
Query: 214 KGILPPIL 237
KGI+P +L
Sbjct: 313 KGIVPRVL 320
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 28 IGAGGSAGFVEVCIMHPLDLVKTRLQ 105
+GAG AG + P+D +KTRLQ
Sbjct: 86 LGAGICAGLAVDLSLFPIDTLKTRLQ 111
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 31.1 bits (67), Expect = 0.18
Identities = 21/92 (22%), Positives = 40/92 (43%)
Frame = +3
Query: 201 HLILERYSASYIGRNP*KAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEAVLVN 380
H + + ++A+ P +KF +EQ +++ + + T L+G AG
Sbjct: 76 HGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAGTCSVFFTY 135
Query: 381 PFEVVKVTLQSNKSLATEIPSTWSVTRQIVRE 476
P E+++V L + P+ VT+ I E
Sbjct: 136 PLELIRVRLAYITNTGKN-PTLTQVTKDIFHE 166
Score = 29.1 bits (62), Expect = 0.71
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AGG+AG V ++ PLD VK + Q+N ++ + + G+ +K +Y G +
Sbjct: 23 AGGTAGCVAKSVVAPLDRVK--ILYQTNHASYR-GYAYSRHGLYKAIKHIYHVYGLHGLY 79
Query: 214 KG 219
+G
Sbjct: 80 QG 81
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 30.3 bits (65), Expect = 0.31
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +1
Query: 4 LLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKM 183
LL + + +GG A V + PL+ +K Q+Q+NK Y+ + + K+
Sbjct: 16 LLSNDLISMLSGGVAATVSRTAVSPLERMKIIFQVQNNKE---------YTSLTSTLVKI 66
Query: 184 YRYEGFTSFWKG 219
+ EG F++G
Sbjct: 67 WNREGLIGFFRG 78
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQS 114
G AG +PLD+ +TRL I++
Sbjct: 122 GAIAGAASCATTYPLDIARTRLSIET 147
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 30.3 bits (65), Expect = 0.31
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 237 GRN-P*KAVKFATFEQYKKLFMFGSDTPTPLTFSL---AGLGAGITEAVLVNPFEVVKVT 404
GRN P A +F +EQ+KK F + T F A L IT AVL P +V+K
Sbjct: 141 GRNVPATAFQFVLYEQFKKKF-----SATDHVFGAPKGAALSGAITAAVL-TPLDVIKTQ 194
Query: 405 LQSNKSLATEIPSTWSVTRQIVREHGLGSRGLNKG 509
+ +L E S V R+I +E+G+ G KG
Sbjct: 195 I----NLRPE--SYRKVVRRIYKENGI--FGFEKG 221
>SPBC18A7.02c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 29.5 bits (63), Expect = 0.54
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 640 TLWRPSAENSDNGILILRYISFDAVIESEIHHVEDSV 530
+LWRPS EN D L Y D +E E+ +E+ +
Sbjct: 415 SLWRPSQENPDLDPTGLSYPVLDPRLEEELDLLEEDI 451
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.54
Identities = 24/81 (29%), Positives = 32/81 (39%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+G AG IM P+D V LQ + P Y DC +YR G +
Sbjct: 198 SGVIAGAGSKAIMFPVDTVVKTLQ----------TFPSNYKSFKDCFLSIYRNSGIKGLY 247
Query: 214 KGILPPILAETPKRLLNLQLS 276
+G+ +L P R L LS
Sbjct: 248 RGLSVSMLKVAPGRYECLWLS 268
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 0.71
Identities = 13/62 (20%), Positives = 26/62 (41%)
Frame = +3
Query: 513 QPR*PGTESSTWCISDSITASKDMYRSIRIPLSEFSAEGRHRVHVGGPGARARIFPSMSR 692
QP G + + D++TA KD+Y + + ++F H+ G P ++
Sbjct: 667 QPINTGFSNGDDSVLDTVTAGKDVYAFLNLFFAKFPQYAHLDFHIAGESYAGHYIPQFAK 726
Query: 693 RV 698
+
Sbjct: 727 EI 728
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/83 (19%), Positives = 39/83 (46%)
Frame = +1
Query: 13 QAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRY 192
+ ++ + A SA + ++ P++ +K R+Q S+P + + + K+
Sbjct: 119 RTSIYLAASASAELLADIMLCPMEAIKVRVQT---------SNPRFANTTREAWSKIVTN 169
Query: 193 EGFTSFWKGILPPILAETPKRLL 261
EGF + ++G+ P + P ++
Sbjct: 170 EGFGTLYRGLAPLWFRQIPYTMM 192
>SPAC1F7.13c |rpl801|rpl8-1, rpl18, rpk5a, rpl2-1, SPAC21E11.02c|60S
ribosomal protein L8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 253
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGII 165
G S+G + + H +D KTR+++ S + PS GI+
Sbjct: 126 GRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIV 168
>SPBC2F12.07c |rpl802|rpl8-2, rpk37, rpk5b|60S ribosomal protein
L8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 253
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGII 165
G S+G + + H +D KTR+++ S + PS GI+
Sbjct: 126 GRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIV 168
>SPBC839.04 |rpl803|rpl8-3, rpk5-b, rpkD4|60S ribosomal protein
L8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 253
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGII 165
G S+G + + H +D KTR+++ S + PS GI+
Sbjct: 126 GRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIV 168
>SPAC18G6.12c |||hypothetical protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 505 LFSPREPRPCSLTICRVTDHVLGISVAKDLFD*SVTLTTSNGF 377
+F PR P+P + HVLG S K++ D L T N F
Sbjct: 80 IFPPRPPKPNDSYMTGWKSHVLGAS--KEILDIYSVLCTLNEF 120
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 204 LILERYSASYIGRNP*KAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITE 365
LIL+ Y S R P K +T E+ L F S + F L G+G + E
Sbjct: 2466 LILKDYDPSKAVRKPKIYSKVSTEERDFNLEQFDSGIDLSVKFLLEGIGISLVE 2519
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +1
Query: 199 FTSFWKGILPPILAETPKRLLNLQ------LSNNTRSFLCSDQILLRHLRFLWQD*EPE 357
FTS + G L L + PKR+++ +S+ + +FLC ++RH F+W P+
Sbjct: 675 FTSVFAGALWWCLHQ-PKRMMDRSVKTFWIMSSISLTFLCISCFIMRHHLFVWSVFSPK 732
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 252 KAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEAVLVNPFEVVKVTLQ 410
++V F ++ K F PT L + ++GLG G ++ PFE K+ Q
Sbjct: 84 RSVSFTVYDSLK--LTFAHVDPT-LRYFISGLGTGTFISLFACPFEYSKLYSQ 133
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 525 PGTESSTWCISDSITASKDMYR-SIRI 602
P T S +C+ S+T +KD+ R SIR+
Sbjct: 88 PPTAFSNYCVKPSLTRNKDIPRTSIRV 114
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,372,713
Number of Sequences: 5004
Number of extensions: 75888
Number of successful extensions: 290
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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