Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0067
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 62 5e-10
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 55 5e-08
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 55 7e-08
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 54 2e-07
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 50 2e-06
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 50 2e-06
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 49 5e-06
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 49 5e-06
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 48 6e-06
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 42 5e-04
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 42 7e-04
SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 41 0.001
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 41 0.001
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 40 0.002
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.003
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 37 0.015
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 36 0.035
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.035
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 36 0.035
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 33 0.25
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 33 0.25
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.76
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.0
SB_39610| Best HMM Match : WSC (HMM E-Value=0.003) 29 4.1
SB_2704| Best HMM Match : TP2 (HMM E-Value=6.9) 29 5.4
SB_39649| Best HMM Match : DUF81 (HMM E-Value=3.3) 28 7.1
SB_564| Best HMM Match : TrkA_N (HMM E-Value=0.05) 28 7.1
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_36928| Best HMM Match : Pox_A32 (HMM E-Value=0.022) 28 7.1
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 9.4
SB_27411| Best HMM Match : RVT_1 (HMM E-Value=0.002) 28 9.4
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 62.1 bits (144), Expect = 5e-10
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +1
Query: 28 IGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTS 207
+GAG AG ++PLD++KTRLQ+ + +P Y+GIIDC KK+Y EG +
Sbjct: 209 LGAGCLAGMTASVAVNPLDVIKTRLQLLN-----RPQGEPNYNGIIDCAKKIYSNEGLAA 263
Query: 208 FWKGILPPILAETP 249
F+KG +P ++ P
Sbjct: 264 FYKGAVPRMIVIAP 277
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 321 PLTFSL-AGLGAGITEAVLVNPFEVVKVTLQ 410
PL + L AG AG+T +V VNP +V+K LQ
Sbjct: 204 PLIYCLGAGCLAGMTASVAVNPLDVIKTRLQ 234
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSN 117
G AG V V PLDL KTRLQ Q +
Sbjct: 69 GAIAGMVGVTCTFPLDLCKTRLQNQGS 95
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/81 (35%), Positives = 41/81 (50%)
Frame = +1
Query: 19 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 198
A + AG +G + PLDL+K RLQ + +KP + + G +DC K R EG
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQ---VKPGETAPFKGAMDCFMKTVRLEG 77
Query: 199 FTSFWKGILPPILAETPKRLL 261
+KG+L P+L TP L
Sbjct: 78 LRGLYKGMLSPLLMATPSTAL 98
Score = 35.1 bits (77), Expect = 0.062
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 28 IGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTS 207
+ AGG AG +M P+D++KTR+QI P Y G D +K++ EG +
Sbjct: 223 VSAGGIAGLALWGLMFPVDMLKTRVQI-------APMG-RYPRGARDVLKEVLCNEGPMA 274
Query: 208 FWKGILPPIL 237
+KG +P ++
Sbjct: 275 LYKGYVPGMI 284
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG GF + P + +K LQ+++ S S P+ +K++Y EG +
Sbjct: 126 AGLFCGFCVSFLFAPAERIKCILQVEAGASGSTQSGPY------AIVKRIYAEEGVRGIF 179
Query: 214 KGILPPILAET 246
+G+ P ++ +T
Sbjct: 180 RGLPPTMIRDT 190
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +1
Query: 31 GAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSF 210
G G+A + P++ VK +Q Q D H Y G+IDC + YR EGF SF
Sbjct: 14 GLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLD-HPYKGVIDCTSRTYRSEGFLSF 72
Query: 211 WKGILPPILAETPKRLLNLQLSNNTRS 291
W+G L + P + LN + ++
Sbjct: 73 WRGNLANCIRYFPTQALNFAFKDQVKA 99
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 28 IGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTS 207
I +GG+AG + + ++ LD +TRL ++ K ++G+ID KK +G
Sbjct: 117 IASGGAAGAMSLFFVYSLDYCRTRL--ANDAKVGKKGGERQFNGMIDVYKKTIASDGLVG 174
Query: 208 FWKGIL 225
++G +
Sbjct: 175 LYRGFV 180
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 73 HPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKG 219
+P+D ++ R+ + S + A+K Y G IDC ++ + EG S KG
Sbjct: 230 YPIDTIRRRMMMTSGE-AVK------YKGSIDCTIQILKKEGAMSLMKG 271
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/72 (38%), Positives = 35/72 (48%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AGG G + HPLD +K RLQ KP + ++G DC K R EGF +
Sbjct: 32 AGGFGGVCCIATGHPLDTIKVRLQTMPRP---KPGEKPMFTGTFDCAMKTIRNEGFFGLY 88
Query: 214 KGILPPILAETP 249
KG+ PI TP
Sbjct: 89 KGMAAPITGVTP 100
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 100 LQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETP 249
LQIQ A K Y G IDC +++Y G +KG+ +L + P
Sbjct: 219 LQIQQASGAEKK-----YKGPIDCARQIYAQNGIRGVYKGVCATLLRDVP 263
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1
Query: 19 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 198
A+ + + AGFV C+ P+D+V+TR Q + +P Y G +DC+ K R+EG
Sbjct: 212 ALHLASALVAGFVATCVASPVDIVRTRFMTQPKDTKGRPL---VYQGTLDCIYKTVRHEG 268
Query: 199 FTSFWKGILP 228
+ +KG P
Sbjct: 269 ILALYKGFFP 278
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +1
Query: 25 QIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFT 204
+I AG S+G + I P DLVK R Q A+K + Y + K+ + EGF
Sbjct: 117 KIVAGVSSGVIGSAIATPTDLVKIRFQ------AVKIGETIPYKNMFHAFYKIAKKEGFL 170
Query: 205 SFWKGILPPI 234
W G+ P +
Sbjct: 171 GLWTGMKPTV 180
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +1
Query: 67 IMHPLDLVKTRLQIQSNKSAMKPSDP----HYYSGIIDC-MKKMYRYEGFTSFWKGILPP 231
+ +P+++VK R+Q+ + + S YY G+I + ++YR EG ++GI P
Sbjct: 23 VTNPIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPA 82
Query: 232 ILAE 243
+L +
Sbjct: 83 LLRQ 86
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +1
Query: 70 MHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETP 249
++P+DLVKTR+Q N+ A+ ++ Y IDC K+ R EG ++G+LP +L +P
Sbjct: 931 VYPIDLVKTRMQ---NQRAVLEAEK-VYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSP 986
Query: 250 KRLLNLQLSNNTRSFLCSD 306
++ + L ++ R D
Sbjct: 987 EKAIKLTTNDFVRGIFSDD 1005
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AGG AG +E+C P + VKT+LQ+ ++ A KP Y G IDC+KK + G +
Sbjct: 46 AGGIAGGLEICCTFPTEYVKTQLQL--DEKAAKP----IYRGPIDCVKKTVKGHGVLGLY 99
Query: 214 KGILPPILAETPK 252
+G+ + PK
Sbjct: 100 RGLSSLLYGSVPK 112
Score = 36.7 bits (81), Expect = 0.020
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 222 SASYIGRNP*KAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEA-VLVNPFEVVK 398
S+ G P +V+FA FE K + T +GLGAG++EA V+V P E +K
Sbjct: 103 SSLLYGSVPKASVRFAVFEYLKNKMADENGKLTQFQTLASGLGAGVSEAVVVVCPMETIK 162
Query: 399 V 401
V
Sbjct: 163 V 163
Score = 33.1 bits (72), Expect = 0.25
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +1
Query: 19 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 198
A +GAG S V VC M + + Q Q N P ++SG+ +K EG
Sbjct: 141 ASGLGAGVSEAVVVVCPMETIKVKFIHDQTQPN-----PKYKGFFSGVRTILKT----EG 191
Query: 199 FTSFWKGILPPILAETPKRLLNLQLSNNTRSFL 297
F +KG+ ++ + +++ + +N +S+L
Sbjct: 192 FFGVYKGLTATVIKQGSNQMIRFFVYSNLKSWL 224
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+GG AG + + +P+D+VK+ Q ++ KP + Y+G DC+KK+Y G ++F
Sbjct: 363 SGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQ--YKYNGYADCVKKIYISGGVSAFG 420
Query: 214 KGILPPILAETPKRLLNL 267
+G+L IL P L
Sbjct: 421 QGLLATILRGFPTNAATL 438
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAM--------KPSDPHYYSGIIDCMKKMYR 189
+G AG V+ + P++L KTR+Q+Q + + Y+G +DC+KK++
Sbjct: 250 SGAIAGGVQSIVCCPMELAKTRVQVQGQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVFH 309
Query: 190 YEGFTSFWKGI 222
EG ++G+
Sbjct: 310 SEGLRGCFRGM 320
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 151 YSGIIDCMKKMYRYEGFTSFWKGILPPI 234
Y+G+ DC K++ + E +KG+ P+
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPL 218
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 48.8 bits (111), Expect = 5e-06
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG +AG + PLD +K RLQ KP +P Y DC K+ R EG +
Sbjct: 44 AGSAAGAAANLVGFPLDTIKVRLQAMP---LPKPGEPWMYKNSFDCFFKIIRNEGVYYLF 100
Query: 214 KGILPPILAETPKRLLNLQLSNNTRSF---LCSDQILLRHL 327
+G+ PIL P + + +S+ + D LLR L
Sbjct: 101 RGVTVPILNSIPNTTVLFSCVSFVKSYKLPVSKDPELLRSL 141
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +1
Query: 28 IGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTS 207
+ AG AG ++ PLD VK LQI+ K Y G +DC++++YR G
Sbjct: 141 LAAGMIAGVATSFVLTPLDRVKCILQIE------KAFGGSSYGGPVDCLRRIYREAGVRG 194
Query: 208 FWKGILPPILAETP 249
+KGI + + P
Sbjct: 195 VYKGISVTAMRDIP 208
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+G AG P D++KTR Q + P Y ++D ++ + RYEGFT+ +
Sbjct: 243 SGAIAGMAYWTAGLPADVLKTRYQT---------APPGRYGRVLDVLRTLVRYEGFTALY 293
Query: 214 KG 219
G
Sbjct: 294 TG 295
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 246 P*KAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEAVLVNPFEVVKVTLQSNKSL 425
P V F+ K + S P L AG+ AG+ + ++ P + VK LQ K+
Sbjct: 112 PNTTVLFSCVSFVKSYKLPVSKDPELLRSLAAGMIAGVATSFVLTPLDRVKCILQIEKAF 171
Query: 426 -ATEIPSTWSVTRQIVREHGLGSRGLNKG 509
+ R+I RE G+ RG+ KG
Sbjct: 172 GGSSYGGPVDCLRRIYREAGV--RGVYKG 198
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 48.8 bits (111), Expect = 5e-06
Identities = 29/93 (31%), Positives = 46/93 (49%)
Frame = +1
Query: 19 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 198
A + AGG AG V P D++K+R+Q N + Y G++DC + Y+ EG
Sbjct: 133 ATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKFR------YKGMMDCALQSYKEEG 186
Query: 199 FTSFWKGILPPILAETPKRLLNLQLSNNTRSFL 297
F +GI P +L + L LQ + + ++L
Sbjct: 187 MIVFTRGIWPTLLRGFLQVLRFLQFTGSLWAYL 219
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG AG +V ++ P+DLVK +LQ+Q+ K S Y G +DC+ K+YR G +
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTE---AKRSTRSVYRGPVDCLVKLYRSRGLAGCF 95
Query: 214 KG 219
+G
Sbjct: 96 QG 97
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+G +AG V HPLD+V+ RL +Q M Y+GI+ +++++ EG +
Sbjct: 34 SGATAGVVATASTHPLDVVRARLTVQD----MSTRSISNYTGIVSALRRIHIEEGIRGLY 89
Query: 214 KGILPPILAETP 249
KG++P +++ P
Sbjct: 90 KGLVPSLVSIAP 101
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKS 123
G AG + ++HPLD+V+ ++Q+ +S
Sbjct: 133 GAIAGMIAQTVVHPLDVVRRQMQVDRGRS 161
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKP-SDPHYYSGIIDCMKKMYRYEGFTSFW 213
G +G + ++ P D++K R+Q+Q + A + Y G+ DC + + + EG +
Sbjct: 36 GALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLF 95
Query: 214 KGILPPILAETPKRLLNLQLSNN 282
KG+ P L + + L+ + L NN
Sbjct: 96 KGLAPSTL-KVGEFLITVALGNN 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG AG ++PL+++KTRL I+ Y G++ +Y+ EG SF+
Sbjct: 236 AGSMAGVASQTSIYPLEVLKTRLAIRKTGQ---------YRGLLHAASVIYQKEGIRSFY 286
Query: 214 KGILPPILAETPKRLLNLQLSNNTRSF 294
+G+ P +L P ++L + ++F
Sbjct: 287 RGLFPSLLGIIPYAGIDLAVYETLKNF 313
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 73 HPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPK 252
+PL LV+TRLQ Q+ + D ++ ++K+ +GF ++G+ P L P
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD-----NMVSVLRKIITEDGFKGLYRGLAPNFLKVAPA 400
Query: 253 RLLNLQLSNNTR 288
++ + N R
Sbjct: 401 VSISYVVYENLR 412
Score = 31.9 bits (69), Expect = 0.57
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 225 ASYIGRNP*KAVKFATFEQYKKLFMFGSDTPTPLTFS--LAGLGAGITEAVLVNPFEVVK 398
A+ I P +KF +E+ KKL GSDT LAG AG+ + P EV+K
Sbjct: 198 ANVIKIAPESGIKFFAYEKAKKLV--GSDTKALGVTDRLLAGSMAGVASQTSIYPLEVLK 255
Query: 399 VTLQSNKS 422
L K+
Sbjct: 256 TRLAIRKT 263
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 31 GAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSF 210
G GG+ V PLD +K LQ+Q++ + GI+ K M R G S
Sbjct: 141 GGGGALAGVSRTATAPLDRLKVLLQVQASSTNR--------FGIVSGFKMMLREGGIKSL 192
Query: 211 WKG 219
W+G
Sbjct: 193 WRG 195
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 28 IGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYE-GFT 204
I AGG AG +PLD+V++RL A + +D H Y GI +K+++ E G
Sbjct: 2 IVAGGLAGLTACSCTYPLDIVRSRL-------AFQVADEHTYCGICQTVKQIFMTEGGMV 54
Query: 205 SFWKGILPPILAETP 249
+ ++G P L+ P
Sbjct: 55 ALYRGFTPTSLSMIP 69
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 198
G AG + +PLD+V+ R+Q+ A +D H YS I+ +Y +G
Sbjct: 113 GALAGATSQTLAYPLDVVRRRMQL-----AGTVADGHKYSTCINTFISVYTEDG 161
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG S+ + + ++P +++KTRL +Q + S+ HY G+ +K + R EG + +
Sbjct: 158 AGTSSTLIAMVTVYPCEVIKTRLTVQH----VNKSNAHY-KGMRHALKTILREEGILALY 212
Query: 214 KGILPPILAETP 249
KG+ P L P
Sbjct: 213 KGVTPSFLGLFP 224
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
GG++ + + PL++VK Q+ + ++ KP G+I +Y+ EG +FWK
Sbjct: 65 GGTSAVLARSLTSPLEVVKVLAQVGTQEA--KP-------GLIRTFASVYKREGIKAFWK 115
Query: 217 G 219
G
Sbjct: 116 G 116
>SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Frame = +1
Query: 31 GAGGSAGFVEVCIMHPLDLVKTRLQIQS-----------NKSAMKP----SDPHYYSGII 165
G GGS G + C PLD+++TRLQ + N + ++ S P + G+
Sbjct: 734 GLGGSTGVILTC---PLDVIQTRLQSSAFRLQRISQLGLNMAGIEATSSVSKPTNFYGVF 790
Query: 166 DCMKKMYRYEGFTSFWKGILPPILAETPKRLLNLQLSNNTRSFLCSDQIL 315
+ + R EG S +KG+ P +LA TP R + + +L + IL
Sbjct: 791 SYGRYIARTEGARSLFKGLCPNLLAVTPSRAIYFTTYQKLKEWLNNGGIL 840
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 40 GSAGFVEVCIMHPLDLVKTRLQIQSNK-SAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
G+A + P++ VK +Q Q A + S P Y G++DC + YR EG SFW+
Sbjct: 18 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSP--YKGVVDCTMRTYRAEGIGSFWR 75
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
G S+ + + ++P +++KTRL +Q + S+ HY G+ +K + R EG + +K
Sbjct: 428 GTSSTLIAMVTVYPCEVIKTRLTVQH----VNKSNAHY-KGMRHALKTILREEGILALYK 482
Query: 217 GILPPILA 240
G+ P LA
Sbjct: 483 GVTPSFLA 490
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1
Query: 67 IMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAET 246
+ +PLD+V+ RL I K Y+G+I+ ++YR EG +F++G +P ++
Sbjct: 6 LTYPLDMVRARLAITQKKK---------YTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56
Query: 247 P 249
P
Sbjct: 57 P 57
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
G AG V +PLD+V+ R+Q++ + K YS D K + R EGF +K
Sbjct: 688 GAVAGAVAQSGTYPLDVVRRRMQMERGEGMFK------YSSTWDGFKVIVRSEGFIGLFK 741
Query: 217 GILPPILAETP 249
G+ P +L P
Sbjct: 742 GMWPNLLKVAP 752
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAM-------KPSDPHYYSGIIDCMKKMYRY 192
AG +A E + P+D K RLQIQ + M + + +Y G++ M +++
Sbjct: 21 AGIAASIAEAATI-PIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKT 79
Query: 193 EGFTSFWKGILPPI 234
EG + +KG++P I
Sbjct: 80 EGMKTMYKGLIPGI 93
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 46 AGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKG 219
AGFV C+ P+D+VKTR M Y SG IDC +++++ G +++KG
Sbjct: 228 AGFVTTCVASPVDVVKTRY--------MNSPANTYKSG-IDCAVQLFKHNGIFAYYKG 276
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 133 PSDPHY-YSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRLLNLQL 273
P PH ++ ID + K+ RYEG +S W+G+ P ++ P ++ L
Sbjct: 53 PHPPHPPFTSSIDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTL 100
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
G +A +PL++VKTR+Q+Q + + + YY + + +YEG + K
Sbjct: 11 GATAASGACFFTNPLEVVKTRMQLQGELKS-RGTYSVYYRNVFHASYTIAKYEGILAMQK 69
Query: 217 GILPPIL 237
G+ P ++
Sbjct: 70 GLFPALI 76
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMK-PSDPHYYSGIIDCMKKMYRYEGFTSF 210
AG A F ++ P +L+K RLQ Q + + + P SG+ID ++ R +GF
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPK--SGVIDVTMQIIRNDGFQGL 169
Query: 211 WKGILPPILAETP 249
++G+ E P
Sbjct: 170 FRGMTATWAREVP 182
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +1
Query: 10 KQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYR 189
K+ A AG G V P D +K ++Q + P +DC K ++
Sbjct: 7 KRMATDFTAGAMGGTACVFAGQPFDTIKVKMQ----------TFPSMSKNALDCGIKTFK 56
Query: 190 YEGFTSFWKGILPPILA 240
EGF + G +P + A
Sbjct: 57 QEGFKGLYAGTIPSLAA 73
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.027
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGF-TSFW 213
GG AG V I +PLD+V+ R+Q+ A D H Y+ I+ + +Y+ +G +
Sbjct: 179 GGVAGAVSQTIAYPLDVVRRRMQL-----AGAVPDGHKYNTCINTLVNVYKDDGIRRGLY 233
Query: 214 KGILPPILAETPKRLLNLQLSNNTRSFL 297
+G+ L P+ + + T+ FL
Sbjct: 234 RGLSINYLRVCPQVAIMFGVYEVTKQFL 261
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +1
Query: 16 AAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYE 195
A ++ AG AG +PLD+V++RL A + + Y+ I ++ + E
Sbjct: 64 AINKLVAGSLAGMTACACTYPLDMVRSRL-------AFQVAQDQGYTTITQTIRCISVKE 116
Query: 196 GF-TSFWKGILPPILAETPKRLLNLQLSNNTRSFLCSDQI 312
G + +KG +P +L P + + +++ +I
Sbjct: 117 GGPKALYKGFVPTLLTIVPAMGIGFYMFETMKAYFLETRI 156
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 35.9 bits (79), Expect = 0.035
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 31 GAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSF 210
GA +G P+D+ KTR+Q KP Y G +D + ++ R EG +
Sbjct: 98 GASMISGLATTVASMPVDIAKTRIQNMRIIDG-KPE----YKGTMDVLARIVRNEGVFAL 152
Query: 211 WKGILP 228
WKG P
Sbjct: 153 WKGFTP 158
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
+G SAG + I P DLVK ++Q++ + + P G + + GF W
Sbjct: 137 SGMSAGALGQFISSPTDLVKVQMQMEGRRLSFYPISS--VRGTFHAFRNIVDKYGFRGLW 194
Query: 214 KGILPPI 234
KG LP +
Sbjct: 195 KGWLPNV 201
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 46 AGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGIL 225
+G V I P D++KTR+ ++P Y G ++C EG S +KG L
Sbjct: 310 SGLVAATISTPADVIKTRIM----------NNPSGYQGAVECFMLAVHREGLLSLYKGWL 359
Query: 226 P 228
P
Sbjct: 360 P 360
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 35.9 bits (79), Expect = 0.035
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 198
+G GF + +P DLVK+ + + A++ Y G IDC +K+Y EG
Sbjct: 310 SGAMGGFFYWFLTYPTDLVKSSMMADHSDKALRK-----YHGYIDCARKLYTNEG 359
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 37 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 216
G AG V +PLD+V+ R+Q++ ++ Y + + + EGF +K
Sbjct: 168 GSLAGAVSQTATYPLDVVRRRMQMKGIRADFA------YKSTLHAFSSIVKLEGFRGLYK 221
Query: 217 GILPPIL 237
G+ P IL
Sbjct: 222 GMWPNIL 228
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AGG AG V + PL+ VK LQIQ K G++ + ++ + EG ++
Sbjct: 40 AGGIAGAVSRTSVSPLERVKILLQIQVKNPKFK--------GVLPTLIQIGKEEGILGYF 91
Query: 214 KG 219
KG
Sbjct: 92 KG 93
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 67 IMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGIL 225
+++P +L+K RLQ+Q K+ + Y+G +D K+ R EG +KG L
Sbjct: 32 LLYPANLIKIRLQVQ-RKTTL-------YNGSLDAFTKVIRTEGVRGLYKGYL 76
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 219 YSASYIGRNP*KAVKFATFEQYKKLF--MFGSDTPTPLTFSLAGLGAGITEAVLVNPFEV 392
Y AS + P A+ +A++ Y + + T L +G+ AG+T A L NP +V
Sbjct: 168 YFASLMTYAPSSAIWWASYGFYTGVIGNLSADGTHRLLVLGSSGVLAGVTAATLTNPLDV 227
Query: 393 VKVTLQ 410
++ LQ
Sbjct: 228 IRTRLQ 233
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG G V PLD +K RLQ + +G +D + + + EG +
Sbjct: 75 AGSVGGVTGVTAGQPLDTIKVRLQAS------------FGAGPLDMLARTVKTEGVRGLY 122
Query: 214 KGILPPILAETP 249
KG+L P+L P
Sbjct: 123 KGMLAPVLVAAP 134
Score = 31.9 bits (69), Expect = 0.57
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG G I P + VK LQ+Q +S K Y G+ DC+ ++YR G +
Sbjct: 166 AGVFCGVCVSFIYAPTERVKCLLQVQK-ESGTKAR----YQGLGDCLLQVYRTGGLRGVF 220
Query: 214 KGILP 228
KG+ P
Sbjct: 221 KGLGP 225
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +1
Query: 34 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 213
AG A M+P++++K RLQ+ + Y G+I C +++ EG +F+
Sbjct: 3 AGACATVFHDGAMNPIEVIKQRLQMYGSP----------YRGVIHCATSVFKEEGIRAFY 52
Query: 214 KGILPPILAETPKRLLNLQLSNNTRSFL 297
+ + P + L+ + R L
Sbjct: 53 RSYTTQLSMNIPFQTLHFTVYEYARKAL 80
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 151 YSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRLLNLQLSNNTRSFL 297
+SGI+ + M + EG S +KG+ +L TP R + + + + L
Sbjct: 774 FSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIYSKLKDML 822
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 46 AGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGI 222
A F+ + +PL +KTRLQ++ N+ + S + Y+ EG +F++G+
Sbjct: 844 AAFINHTVTNPLWFIKTRLQLE-NQGGTRAS-------AFKIVSMAYKAEGIRAFYRGL 894
>SB_39610| Best HMM Match : WSC (HMM E-Value=0.003)
Length = 264
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 130 KPSDPHYYSGIIDCMKKMYRYE-GFTSFWKGILPPIL 237
K +DP SG+I C K+ Y+ GF +KG + P +
Sbjct: 110 KCNDPMLGSGLIGCYKEREMYDSGFDEIYKGQVTPAM 146
>SB_2704| Best HMM Match : TP2 (HMM E-Value=6.9)
Length = 351
Score = 28.7 bits (61), Expect = 5.4
Identities = 28/91 (30%), Positives = 37/91 (40%)
Frame = +3
Query: 15 SSYANRCRWKRGFCGSVYYAPTGFGQD*ASNTK*QISNETIRSTLLQRYYRLHEKNV*VR 194
SS + CRW RG APT Q AS+T Q T+ +L+ Y R E
Sbjct: 261 SSLRSSCRWPRGRASGRACAPT-MRQALASHTH-QSRKATLPVSLIGLYTRRWELAAAFT 318
Query: 195 RFHLILERYSASYIGRNP*KAVKFATFEQYK 287
R + +R + S G P A +Q K
Sbjct: 319 RTPAVNQRATESADGVTPPPGPPLAAAQQTK 349
>SB_39649| Best HMM Match : DUF81 (HMM E-Value=3.3)
Length = 681
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 321 PLTFSLA-GLGAGITEAVLVNPFEVVKVTLQSNKSLATEIPSTWSVTRQIVREHGLGSRG 497
P+ S+A G+ A + A + V + +N S+A IP+ SV +I+ +H + +RG
Sbjct: 207 PVNHSVANGIPANHSVANGIPANHSVANGIPANHSVANGIPANHSVANRILAKHIIANRG 266
Query: 498 LN 503
++
Sbjct: 267 ID 268
>SB_564| Best HMM Match : TrkA_N (HMM E-Value=0.05)
Length = 226
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -1
Query: 747 NYT*RRPGNRAEDPGXGLFATSKGIFAHEPQDPRREPYGDL 625
NYT RP DP G + +G++ ++ R P D+
Sbjct: 159 NYTIVRPAGLTNDPPNGKYKIEEGVYCNKTGTTHRIPRADV 199
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 749 GTILDDAPATGL-RTLXPDSSRHRREYSRTSPRTPDVNPMAT 627
G DDA + G+ T P+S+ RE + RTP VN AT
Sbjct: 2039 GLRADDAASAGIAHTPVPESNYAWRELAAAFTRTPAVNQRAT 2080
>SB_36928| Best HMM Match : Pox_A32 (HMM E-Value=0.022)
Length = 496
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 749 GTILDDAPATGL-RTLXPDSSRHRREYSRTSPRTPDVNPMAT 627
G DDA + G+ T P+S+ RE + RTP VN AT
Sbjct: 415 GLRADDAASAGIAHTPVPESNYAWRELAAAFTRTPAVNQRAT 456
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +3
Query: 288 KLFMFGSDTPTPLTFSLA-GLGAGITEAVLVNPFEVVKVTLQSNKSLATEIP 440
K F FGS +P TF A G + +++ PF T + +T P
Sbjct: 2219 KPFQFGSGAVSPFTFGTATGSSTSVPQSIATAPFVFGAATTTAEALTSTSTP 2270
>SB_27411| Best HMM Match : RVT_1 (HMM E-Value=0.002)
Length = 698
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 181 MYRYEGFTSFWKGILPPILAETP-KRLLNLQLSNNTRSFLCSDQILLRHLRFLWQ 342
++ YE F + GI+ ++AET K L+ + N + + L +++LR R++ Q
Sbjct: 416 VFAYEKFYEYIYGIIANVIAETDHKPLIAISKKNLSDTTLRIQRLMLRLQRYVLQ 470
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,514,930
Number of Sequences: 59808
Number of extensions: 571964
Number of successful extensions: 1632
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -