Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0064
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    26   1.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   7.0  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   9.3  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 25/96 (26%), Positives = 35/96 (36%)
 Frame = -1

Query: 397 WSILKIIKFTLGTLLRSAVGKPLLCRPLPSQVMLECHSHLLVAHQI*MHYLH**TCSITI 218
           W  +  + FT GT L +       C  +   V L  H    VA       L+       I
Sbjct: 211 WPTIYTLGFTGGTKLLTIFSNVKYCSAMLKLVALRIHCLARVAQDRAEKELN-----EII 265

Query: 217 SIHQFPERCVFLYFELYNCVILT*YFQINVFVFSLL 110
           S+HQ    CVFL    +  V    + Q  +   SL+
Sbjct: 266 SMHQRVLNCVFLLETTFRWVFFVQFIQCTMIWCSLI 301


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 400 RWSILKIIKFTLGTLLRSAVGKPLLCRP 317
           RW I+ I  ++    +R AVG+ LL RP
Sbjct: 191 RWRIISIYSYSNHVYIRFAVGE-LLQRP 217


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 384 LRIDHLQWVKINEVY 428
           L +DH +W K NE Y
Sbjct: 314 LLLDHFKWEKENEYY 328


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,074
Number of Sequences: 2352
Number of extensions: 13661
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)