Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0060
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    27   0.21 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    27   0.21 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   3.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   3.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.9  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 289 FKMHRHFLCLSLFIFAGYCDANYCRDANLCCPGRDS-SCVVQKAHQN 426
           F   +H+   +    AG+   +  R+    C  +D  SC++ K H+N
Sbjct: 44  FSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDKTHRN 90


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 289 FKMHRHFLCLSLFIFAGYCDANYCRDANLCCPGRDS-SCVVQKAHQN 426
           F   +H+   +    AG+   +  R+    C  +D  SC++ K H+N
Sbjct: 44  FSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDKTHRN 90


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 296 ILNKEFFVKRYKVSNLFNMYIIFFLN 219
           I+  EF+ K++ +   F MY++FF+N
Sbjct: 139 IMGLEFY-KQFAIE-YFQMYVLFFVN 162


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 296 ILNKEFFVKRYKVSNLFNMYIIFFLN 219
           I+  EF+ K++ +   F MY++FF+N
Sbjct: 139 IMGLEFY-KQFAIE-YFQMYVLFFVN 162


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 388 SPGSTGSRPGNSSHRNSP 335
           SPG+   R GNS   N+P
Sbjct: 165 SPGAAAGRTGNSLSWNNP 182


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 86  LISKTNRRHPFSY 124
           L  K N RHPF+Y
Sbjct: 112 LPDKVNERHPFAY 124


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 161 VTEKLRMINYEFCMK 117
           +T+   MINY FC++
Sbjct: 271 LTDTAHMINYAFCVQ 285


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 161 VTEKLRMINYEFCMK 117
           +T+   MINY FC++
Sbjct: 271 LTDTAHMINYAFCVQ 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,425
Number of Sequences: 336
Number of extensions: 3783
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)