BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0060
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92809-3|CAB07269.1| 440|Caenorhabditis elegans Hypothetical pr... 40 0.001
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 36 0.030
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 36 0.030
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 33 0.16
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 33 0.21
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 32 0.49
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 32 0.49
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 32 0.49
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 31 0.85
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 31 0.85
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 31 0.85
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81041-12|CAE17708.2| 81|Caenorhabditis elegans Hypothetical p... 30 1.5
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 30 2.0
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 30 2.0
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 30 2.0
Z70265-2|CAA94200.1| 388|Caenorhabditis elegans Hypothetical pr... 29 2.6
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 29 2.6
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 29 2.6
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 29 2.6
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 29 2.6
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 29 3.4
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 4.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 4.5
AF078157-3|AAG24079.1| 119|Caenorhabditis elegans Hypothetical ... 29 4.5
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 28 7.9
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z92809-3|CAB07269.1| 440|Caenorhabditis elegans Hypothetical
protein R17.3 protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 406 VQKAHQNAIIEDLTDKPCYCDHAWLEIGRLLPRLRETCGVIDCVVSSWGSWSEC---DTT 576
VQ A+ +E + CYCD + +G C DCV++ W SW++C + T
Sbjct: 203 VQPANNLYYLESSISE-CYCDEHCVTLGDCCSDYTFVCPPRDCVLTDWDSWTQCTADNGT 261
Query: 577 CGL 585
CG+
Sbjct: 262 CGI 264
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 301 RHFLCLSLFIFAGY-CDANYCRDANLCCPGRDSSC 402
RHFL +SL Y C A C LCC GR+++C
Sbjct: 2 RHFLFVSLVFSIPYTCHAG-CYQRRLCCAGRNNTC 35
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 532 CVVSSWGSWSECDTTCGLWEHGANA*DR 615
C VSSWGSW EC CG HG + +R
Sbjct: 497 CQVSSWGSWGECSVQCG---HGMRSRNR 521
Score = 32.3 bits (70), Expect = 0.37
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 526 IDCVVSSWGSWSECDTTCG 582
+DC VS W +W C +CG
Sbjct: 704 VDCEVSKWTAWGSCSVSCG 722
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 502 RLRETCGVIDCVVSSWGSWSECDTTCG 582
RLR + C V W WS C +CG
Sbjct: 754 RLRPCPVKLTCQVGPWSRWSPCSVSCG 780
Score = 29.5 bits (63), Expect = 2.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 529 DCVVSSWGSWSECDTTCG 582
+C+++ W WS C TCG
Sbjct: 432 ECMMTQWEPWSLCSATCG 449
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 35.9 bits (79), Expect = 0.030
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 508 RETCGVIDCVVSSWGSWSECDTTCGL 585
+E+C C+ SWG W C +CG+
Sbjct: 843 KESCNTQKCISQSWGDWLPCSVSCGI 868
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 517 CGVIDCVVSSWGSWSECDTTCGLWEHGANA*DR--GKPPAHGGRHCPSLVQRRGM 675
C + D S+W W+ C +CG G DR P GG+ C L + +
Sbjct: 1320 CHLRDGGWSTWSDWTPCSASCGF---GVQTRDRSCSSPEPKGGQSCSGLAHQTSL 1371
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 547 WGSWSECDTTCGL 585
W SWSEC +CGL
Sbjct: 713 WSSWSECSVSCGL 725
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 535 VVSSWGSWSECDTTCG 582
V S WG W+ C TCG
Sbjct: 905 VWSEWGEWTTCSATCG 920
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 35.9 bits (79), Expect = 0.030
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 508 RETCGVIDCVVSSWGSWSECDTTCGL 585
+E+C C+ SWG W C +CG+
Sbjct: 843 KESCNTQKCISQSWGDWLPCSVSCGI 868
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 517 CGVIDCVVSSWGSWSECDTTCGLWEHGANA*DR--GKPPAHGGRHCPSLVQRRGM 675
C + D S+W W+ C +CG G DR P GG+ C L + +
Sbjct: 1320 CHLRDGGWSTWSDWTPCSASCGF---GVQTRDRSCSSPEPKGGQSCSGLAHQTSL 1371
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 547 WGSWSECDTTCGL 585
W SWSEC +CGL
Sbjct: 713 WSSWSECSVSCGL 725
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 535 VVSSWGSWSECDTTCG 582
V S WG W+ C TCG
Sbjct: 905 VWSEWGEWTTCSATCG 920
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 35.9 bits (79), Expect = 0.030
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 508 RETCGVIDCVVSSWGSWSECDTTCGL 585
+E+C C+ SWG W C +CG+
Sbjct: 843 KESCNTQKCISQSWGDWLPCSVSCGI 868
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 517 CGVIDCVVSSWGSWSECDTTCGLWEHGANA*DR--GKPPAHGGRHCPSLVQRRGM 675
C + D S+W W+ C +CG G DR P GG+ C L + +
Sbjct: 1320 CHLRDGGWSTWSDWTPCSASCGF---GVQTRDRSCSSPEPKGGQSCSGLAHQTSL 1371
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 547 WGSWSECDTTCGL 585
W SWSEC +CGL
Sbjct: 713 WSSWSECSVSCGL 725
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 535 VVSSWGSWSECDTTCG 582
V S WG W+ C TCG
Sbjct: 905 VWSEWGEWTTCSATCG 920
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 460 YCDHAWLEIGRLLPRLRETCGVIDCVVSSWGSWSECDTTCGLW-EHGANA*DRGKPPAHG 636
+C H RL P E+ ID W SW EC TCG + G D K P +G
Sbjct: 585 FCHHG--ACVRLAP---ESLTKIDGQWGDWRSWGECSRTCGGGVQKGLRDCDSPK-PRNG 638
Query: 637 GRHC 648
G++C
Sbjct: 639 GKYC 642
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 433 IEDLTDKPCYCDHAWLEIGRLLPRLRETCGVIDCVVSSWGSWSECDTTCG 582
+ DL D+ YC+H E+ RLR DC W EC TCG
Sbjct: 1398 VRDLPDE--YCNHLDKEVSTRNCRLR------DCSYWKMAEWEECPATCG 1439
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 496 LPRLRETCGVIDCVVSSWGSWSECDTTCG 582
+P +TC ++ C WS C TCG
Sbjct: 1284 MPETSQTCHLLPCTSWKPSHWSPCSVTCG 1312
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 460 YCDHAWLEIGRLLPRLRETCGVIDCVVSSWGSWSECDTTCGLW-EHGANA*DRGKPPAHG 636
+C H RL P E+ ID W SW EC TCG + G D K P +G
Sbjct: 585 FCHHG--ACVRLAP---ESLTKIDGQWGDWRSWGECSRTCGGGVQKGLRDCDSPK-PRNG 638
Query: 637 GRHC 648
G++C
Sbjct: 639 GKYC 642
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 433 IEDLTDKPCYCDHAWLEIGRLLPRLRETCGVIDCVVSSWGSWSECDTTCG 582
+ DL D+ YC+H E+ RLR DC W EC TCG
Sbjct: 1398 VRDLPDE--YCNHLDKEVSTRNCRLR------DCSYWKMAEWEECPATCG 1439
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 496 LPRLRETCGVIDCVVSSWGSWSECDTTCG 582
+P +TC ++ C WS C TCG
Sbjct: 1284 MPETSQTCHLLPCTSWKPSHWSPCSVTCG 1312
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 511 ETCGVIDCVVSSWGSWSEC-DTTCG 582
ETC +D + +WG WS C TTCG
Sbjct: 654 ETCCPLDGIWGAWGEWSVCTGTTCG 678
Score = 27.9 bits (59), Expect = 7.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 541 SSWGSWSECDTTCG 582
+ WG+W+ C TCG
Sbjct: 1206 NDWGAWTTCSATCG 1219
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.49
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 529 DCVVSSWGSWSECDTTC 579
+C+VS WG+WS+C C
Sbjct: 21 ECIVSEWGTWSKCHGGC 37
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 31.9 bits (69), Expect = 0.49
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 514 TCGVIDCVV-SSWGSWSECDTTCG 582
+C DC WG W++C TTCG
Sbjct: 539 SCPYRDCPKWEEWGEWADCSTTCG 562
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 517 CGVIDCVV-SSWGSWSECDTTCGLWE 591
C V +C V + W WS C TCG+ E
Sbjct: 343 CQVPECAVWTLWSPWSLCTATCGVGE 368
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 493 LLPRLRETCGVIDCVVSSWGSWSECDTTCG 582
L ++ G + C + W WS C +CG
Sbjct: 1066 LKSKVESAIGTVQCDWTRWSQWSVCTASCG 1095
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 31.9 bits (69), Expect = 0.49
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 514 TCGVIDCVV-SSWGSWSECDTTCG 582
+C DC WG W++C TTCG
Sbjct: 539 SCPYRDCPKWEEWGEWADCSTTCG 562
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 517 CGVIDCVV-SSWGSWSECDTTCGLWE 591
C V +C V + W WS C TCG+ E
Sbjct: 343 CQVPECAVWTLWSPWSLCTATCGVGE 368
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 493 LLPRLRETCGVIDCVVSSWGSWSECDTTCG 582
L ++ G + C + W WS C +CG
Sbjct: 1039 LKSKVESAIGTVQCDWTRWSQWSVCTASCG 1068
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 499 PRLRETCGVIDCVVSSW--GSWSECDTTCG 582
P ++C +DC + W G W C +TCG
Sbjct: 390 PEFEKSCETVDCE-AEWFTGDWESCSSTCG 418
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 499 PRLRETCGVIDCVVSSWGSWSECDTTCG 582
P +++TC C G WS C CG
Sbjct: 451 PPVKQTCNRFACPEWQAGPWSACSEKCG 478
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 499 PRLRETCGVIDCVVSSW--GSWSECDTTCG 582
P ++C +DC + W G W C +TCG
Sbjct: 390 PEFEKSCETVDCE-AEWFTGDWESCSSTCG 418
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 499 PRLRETCGVIDCVVSSWGSWSECDTTCG 582
P +++TC C G WS C CG
Sbjct: 451 PPVKQTCNRFACPEWQAGPWSACSEKCG 478
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 499 PRLRETCGVIDCVVSSW--GSWSECDTTCG 582
P ++C +DC + W G W C +TCG
Sbjct: 390 PEFEKSCETVDCE-AEWFTGDWESCSSTCG 418
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 499 PRLRETCGVIDCVVSSWGSWSECDTTCG 582
P +++TC C G WS C CG
Sbjct: 451 PPVKQTCNRFACPEWQAGPWSACSEKCG 478
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 532 CVVSSWGSWSECDTTCG 582
C ++W SWS C TCG
Sbjct: 140 CTWTAWSSWSACSVTCG 156
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 544 SWGSWSECDTTCG 582
+WG WS C TCG
Sbjct: 93 AWGGWSSCSATCG 105
>Z81041-12|CAE17708.2| 81|Caenorhabditis elegans Hypothetical
protein C27A7.8 protein.
Length = 81
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 532 CVVSSWGSWSECDTTCG 582
C ++WG WS C TCG
Sbjct: 8 CSWATWGEWSTCSDTCG 24
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 517 CGVIDCVVSSWGSWSECDTTCG 582
C I V +WG WS C T+CG
Sbjct: 810 CNAIG-VWGTWGGWSTCSTSCG 830
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Frame = +1
Query: 508 RETCGVIDC----VVSSWGSWSECDTTCG 582
R +C V C + S W WS+C CG
Sbjct: 852 RRSCNVATCQNDGIWSLWNEWSDCSRVCG 880
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 517 CGVIDCVVSSWGSWSECDTTCG 582
C I V +WG WS C T+CG
Sbjct: 810 CNAIG-VWGTWGGWSTCSTSCG 830
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Frame = +1
Query: 508 RETCGVIDC----VVSSWGSWSECDTTCG 582
R +C V C + S W WS+C CG
Sbjct: 852 RRSCNVATCQNDGIWSLWNEWSDCSRVCG 880
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 517 CGVIDCVVSSWGSWSECDTTCG 582
C I V +WG WS C T+CG
Sbjct: 810 CNAIG-VWGTWGGWSTCSTSCG 830
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Frame = +1
Query: 508 RETCGVIDC----VVSSWGSWSECDTTCG 582
R +C V C + S W WS+C CG
Sbjct: 852 RRSCNVATCQNDGIWSLWNEWSDCSRVCG 880
>Z70265-2|CAA94200.1| 388|Caenorhabditis elegans Hypothetical
protein C05A9.3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 625 GACHDPTRSHHAPRARRWYRIPTTSPSLKQRNRSL 521
G C P+RS P A+ W R+ + ++R +S+
Sbjct: 347 GDCEPPSRSTPGPSAKNWNRLQVDNGECQRRRKSV 381
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 541 SSWGSWSECDTTCGLWEHGANA*DRGKPPAHGGRHC 648
SSW WS C ++C + A PP +GG+ C
Sbjct: 278 SSWSDWSACSSSCHRYRTRACT---VPPPMNGGQPC 310
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 541 SSWGSWSECDTTCGLWEHGANA*DRGKPPAHGGRHC 648
SSW WS C ++C + A PP +GG+ C
Sbjct: 306 SSWSDWSACSSSCHRYRTRACT---VPPPMNGGQPC 338
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 541 SSWGSWSECDTTCGLWEHGANA*DRGKPPAHGGRHC 648
SSW WS C ++C + A PP +GG+ C
Sbjct: 278 SSWSDWSACSSSCHRYRTRACT---VPPPMNGGQPC 310
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 541 SSWGSWSECDTTCGLWEHGANA*DRGKPPAHGGRHC 648
SSW WS C ++C + A PP +GG+ C
Sbjct: 278 SSWSDWSACSSSCHRYRTRACT---VPPPMNGGQPC 310
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 343 CDANY-CRDANLCCPGRDSSCVVQKAHQN 426
C A Y C D++ CCP +++C + N
Sbjct: 446 CPAGYECNDSSYCCPSSENACNANMSRGN 474
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 538 VSSWGSWSECDTTCG 582
V WG WS C TCG
Sbjct: 720 VDHWGPWSACSVTCG 734
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 541 SSWGSWSECDTTCGL 585
+ W SWS C T CG+
Sbjct: 829 TGWSSWSSCSTKCGI 843
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +1
Query: 514 TCGVIDCVVSSWGSWSE---CDTTCG 582
T DC S+W +W E C TCG
Sbjct: 2806 TAAASDCSTSTWNAWQEWSTCTETCG 2831
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +1
Query: 514 TCGVIDCVVSSWGSWSE---CDTTCG 582
T DC S+W +W E C TCG
Sbjct: 2806 TAAASDCSTSTWNAWQEWSTCTETCG 2831
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +1
Query: 514 TCGVIDCVVSSWGSWSE---CDTTCG 582
T DC S+W +W E C TCG
Sbjct: 2806 TAAASDCSTSTWNAWQEWSTCTETCG 2831
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +1
Query: 514 TCGVIDCVVSSWGSWSE---CDTTCG 582
T DC S+W +W E C TCG
Sbjct: 2806 TAAASDCSTSTWNAWQEWSTCTETCG 2831
>AF078157-3|AAG24079.1| 119|Caenorhabditis elegans Hypothetical
protein F25E5.9 protein.
Length = 119
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = -2
Query: 722 RNGYVTIR*APLMFFGMPLRWTSEGQCRPPCA---GGLPRSYAFAPCSQSP 579
RNG + + PL F LR S CR CA G P S + C +P
Sbjct: 25 RNGAIDLNECPLSFCVYFLRLPSSSFCRDLCAICGGAKPTSLSIEECMCAP 75
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 535 VVSSWGSWSECDTTCG 582
V + WG WS C TCG
Sbjct: 509 VWADWGEWSMCSRTCG 524
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 421 GAPSERRRNYPSPGSTGSRPGNSSHRNSPRK*TSLDKENG 302
GA +R+R P P RPG P + +D ENG
Sbjct: 203 GADGQRQRGQPGPPGPPGRPGKVGINGEPGQ-KGIDGENG 241
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 421 GAPSERRRNYPSPGSTGSRPGNSSHRNSPRK*TSLDKENG 302
GA +R+R P P RPG P + +D ENG
Sbjct: 203 GADGQRQRGQPGPPGPPGRPGKVGINGEPGQ-KGIDGENG 241
>Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical
protein C38D4.4 protein.
Length = 556
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 614 RSYAFAPCSQSPQVVSHSDHEPQLETTQSITPQVSRSRGNNLPISSQAW 468
RS P S+ P + + PQ TT SI + + LP +W
Sbjct: 508 RSVVLPPMSKGPGLARSRNFSPQQSTTSSIDNECLEAINAALPSDKDSW 556
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 644 CRP--PCAGGLPRSYAFAPCSQSPQVVSHSDHEPQLETTQSITPQVSRSRGNNLPISSQA 471
CRP P AG P ++ +SP VSH P+ T S + + SR + P S +
Sbjct: 491 CRPKSPMAGDSPSTF-MRHRPRSPTDVSHDSGRPRSPTDLSQSTKPSRRSSSIRPRSPTS 549
Query: 470 WSQ 462
SQ
Sbjct: 550 TSQ 552
>Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical
protein C27A7.9 protein.
Length = 95
Score = 27.9 bits (59), Expect = 7.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 529 DCVVSSWGSWSECDTTCG 582
+C S+W +W+ C +CG
Sbjct: 21 NCTWSNWAAWTTCSDSCG 38
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +1
Query: 316 LSLFIFAGYCDANYCRDANLCCPGRDSSCVVQKAH--QNAIIEDLTD--KPCYCDHAWL 480
L IF + + YC D N C S C++ H QN ++T+ C DH+ L
Sbjct: 40 LIFVIFLDFMPSTYCTDDNFCYK-LQSKCLMDYDHNAQNLCPVNMTENASKCIADHSRL 97
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 644 CRP--PCAGGLPRSYAFAPCSQSPQVVSHSDHEPQLETTQSITPQVSRSRGNNLPISSQA 471
CRP P AG P ++ +SP VSH P+ T S + + SR + P S +
Sbjct: 491 CRPKSPMAGDSPSTF-MRHRPRSPTDVSHDSGRPRSPTDLSQSTKPSRRSSSIRPRSPTS 549
Query: 470 WSQ 462
SQ
Sbjct: 550 TSQ 552
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 349 ANYCRDANLCCPGRD 393
++YCR LCCP +D
Sbjct: 731 SSYCRQLELCCPAKD 745
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,283,093
Number of Sequences: 27780
Number of extensions: 383939
Number of successful extensions: 1307
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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