Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0058
         (427 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171...    29   2.1  
09_03_0169 - 13010909-13012033                                         27   4.8  
10_08_0663 - 19666476-19667017,19667664-19667755,19668039-196680...    27   6.3  
12_01_1078 - 11202284-11202343,11202941-11203000,11203036-112030...    27   8.3  
08_01_0953 - 9471342-9471420,9471848-9471976,9472106-9472313,947...    27   8.3  

>01_07_0124 + 41212728-41212922,41215156-41215210,41215336-41217128,
            41217363-41217521,41217883-41218054,41218173-41218471,
            41219060-41219368
          Length = 993

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +3

Query: 111  TRVIISIF*EGGSRESFVSAINVANPSFK-WVFDCYTGKRNTLQIVYIF*ISVFTMKIYI 287
            T V   +F E  SRE  +  INV +  F  W+F    G     Q++ +  +  F   +++
Sbjct: 886  TFVFCQVFNEVNSRE--MEKINVFSGIFSSWIFSAVVGVTAGFQVIMVELLGTFANTVHL 943

Query: 288  FFNKWL 305
                WL
Sbjct: 944  SGKLWL 949


>09_03_0169 - 13010909-13012033
          Length = 374

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +1

Query: 151 ENHLYPPSMLPTPVLNGYLTVTQVNGILYKL 243
           ENHLY P +  +PV N  L     NG+LY L
Sbjct: 173 ENHLYCPRLRASPVTNPVLH----NGLLYLL 199


>10_08_0663 -
           19666476-19667017,19667664-19667755,19668039-19668095,
           19668304-19668447,19668567-19668613,19668733-19668791,
           19668975-19669045,19669274-19669341,19669431-19669598,
           19669885-19669944,19670075-19670251
          Length = 494

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 106 CIHVLLYLYSRKVDRENHLYPPSMLPTPVL-NGYLTVTQV 222
           CI   LYL S    R     PP  +P P+  NG ++ T++
Sbjct: 321 CIKCALYLCSTSNTRVEFTGPPGSIPCPLCRNGIMSFTKL 360


>12_01_1078 -
           11202284-11202343,11202941-11203000,11203036-11203050,
           11203322-11204026
          Length = 279

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 426 QICFCERTLCPWGIAAIL 373
           Q C C+   CPWG+AA++
Sbjct: 253 QSCTCKEK-CPWGVAAVV 269


>08_01_0953 -
           9471342-9471420,9471848-9471976,9472106-9472313,
           9472619-9472682,9473557-9473598,9474016-9474120,
           9474442-9474536,9474630-9474723
          Length = 271

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +3

Query: 84  LHIRLIYMYTRVIISIF*EGGSR--ESFVSAINVANPSFKWVFDCYTGKRNTLQIVYI 251
           + IRLIY+Y  + + IF     +   S+ + +  +N S      C+ G +  L +V +
Sbjct: 113 MDIRLIYLYRDLFLKIFSAKRVKRVRSYGNILCESNTSISGCSGCHNGDKELLNVVLL 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,744,963
Number of Sequences: 37544
Number of extensions: 200041
Number of successful extensions: 361
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)