Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0057
         (640 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13616-1|AAA64834.1| 4377|Homo sapiens ankyrin G protein.              33   0.86 
AL592430-3|CAI40518.1| 4372|Homo sapiens ankyrin 3, node of Ranv...    33   0.86 
AL359377-2|CAI41373.1| 4372|Homo sapiens ankyrin 3, node of Ranv...    33   0.86 
AL359267-1|CAH73232.1| 4372|Homo sapiens ankyrin 3, node of Ranv...    33   0.86 
U28413-1|AAA82605.1|  396|Homo sapiens CSA protein protein.            32   2.0  
CR536563-1|CAG38800.1|  396|Homo sapiens CKN1 protein.                 32   2.0  
BT020021-1|AAV38824.1|  396|Homo sapiens Cockayne syndrome 1 (cl...    32   2.0  
AY213194-1|AAO21128.1|  396|Homo sapiens Cockayne syndrome 1 (cl...    32   2.0  

>U13616-1|AAA64834.1| 4377|Homo sapiens ankyrin G protein.
          Length = 4377

 Score = 33.1 bits (72), Expect = 0.86
 Identities = 10/23 (43%), Positives = 21/23 (91%)
 Frame = +1

Query: 274  NDSRLPVRAIKVKKDLWDKKSIV 342
            +DS+LP++A+++KKD+W+ + I+
Sbjct: 3430 SDSKLPIQAMEIKKDIWNTEGIL 3452


>AL592430-3|CAI40518.1| 4372|Homo sapiens ankyrin 3, node of Ranvier
            (ankyrin G) protein.
          Length = 4372

 Score = 33.1 bits (72), Expect = 0.86
 Identities = 10/23 (43%), Positives = 21/23 (91%)
 Frame = +1

Query: 274  NDSRLPVRAIKVKKDLWDKKSIV 342
            +DS+LP++A+++KKD+W+ + I+
Sbjct: 3425 SDSKLPIQAMEIKKDIWNTEGIL 3447


>AL359377-2|CAI41373.1| 4372|Homo sapiens ankyrin 3, node of Ranvier
            (ankyrin G) protein.
          Length = 4372

 Score = 33.1 bits (72), Expect = 0.86
 Identities = 10/23 (43%), Positives = 21/23 (91%)
 Frame = +1

Query: 274  NDSRLPVRAIKVKKDLWDKKSIV 342
            +DS+LP++A+++KKD+W+ + I+
Sbjct: 3425 SDSKLPIQAMEIKKDIWNTEGIL 3447


>AL359267-1|CAH73232.1| 4372|Homo sapiens ankyrin 3, node of Ranvier
            (ankyrin G) protein.
          Length = 4372

 Score = 33.1 bits (72), Expect = 0.86
 Identities = 10/23 (43%), Positives = 21/23 (91%)
 Frame = +1

Query: 274  NDSRLPVRAIKVKKDLWDKKSIV 342
            +DS+LP++A+++KKD+W+ + I+
Sbjct: 3425 SDSKLPIQAMEIKKDIWNTEGIL 3447


>U28413-1|AAA82605.1|  396|Homo sapiens CSA protein protein.
          Length = 396

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -2

Query: 162 GNAFQNWTVHGRKDLTE-----STVDNAVVLDNMEELYSGDRRCNV 40
           G+    +TV+  + +T       TVD  V   N +ELYSG R CN+
Sbjct: 313 GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNI 358


>CR536563-1|CAG38800.1|  396|Homo sapiens CKN1 protein.
          Length = 396

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -2

Query: 162 GNAFQNWTVHGRKDLTE-----STVDNAVVLDNMEELYSGDRRCNV 40
           G+    +TV+  + +T       TVD  V   N +ELYSG R CN+
Sbjct: 313 GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNI 358


>BT020021-1|AAV38824.1|  396|Homo sapiens Cockayne syndrome 1
           (classical) protein.
          Length = 396

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -2

Query: 162 GNAFQNWTVHGRKDLTE-----STVDNAVVLDNMEELYSGDRRCNV 40
           G+    +TV+  + +T       TVD  V   N +ELYSG R CN+
Sbjct: 313 GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNI 358


>AY213194-1|AAO21128.1|  396|Homo sapiens Cockayne syndrome 1
           (classical) protein.
          Length = 396

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -2

Query: 162 GNAFQNWTVHGRKDLTE-----STVDNAVVLDNMEELYSGDRRCNV 40
           G+    +TV+  + +T       TVD  V   N +ELYSG R CN+
Sbjct: 313 GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNI 358


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,376,838
Number of Sequences: 237096
Number of extensions: 1552829
Number of successful extensions: 2613
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2613
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)