Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0056
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 244 HFFVCGISFFRFISYCIAFI 185
           HFF   I F   + +C AFI
Sbjct: 168 HFFCAFIIFTMHLLFCCAFI 187


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 235 VCGISFFRFISYCIAFIAGFECS 167
           +  ISF R+ + C    AG+ C+
Sbjct: 161 ILAISFERYYAICKPLKAGYICT 183


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 235 VCGISFFRFISYCIAFIAGFECS 167
           +  ISF R+ + C    AG+ C+
Sbjct: 161 ILAISFERYYAICKPLKAGYICT 183


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 423 WFTVLFSRVRSFVMSPLTPLLK 358
           WF+   +R+R  + S  TPL++
Sbjct: 267 WFSNRRARLRKQITSAATPLVR 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,735
Number of Sequences: 336
Number of extensions: 2395
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)